RNA–Protein interactions for RNA: ENST00000496810.1

COL20A1-208, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL20A1, Length 723 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-208ENST00000496810 GIT1Q9Y2X7 761 aa21.55■■□□□ 1.04
COL20A1-208ENST00000496810 VWA8A3KMH1 1905 aa21.55■■□□□ 1.04
COL20A1-208ENST00000496810 VPS37CA5D8V6 355 aaPredicted RBP21.54■■□□□ 1.04
COL20A1-208ENST00000496810 ACKR2O00590 384 aa21.54■■□□□ 1.04
COL20A1-208ENST00000496810 EPCAMP16422 314 aa21.54■■□□□ 1.04
COL20A1-208ENST00000496810 OR1G1P47890 313 aa21.54■■□□□ 1.04
COL20A1-208ENST00000496810 RAD51AP2Q09MP3 1159 aa21.54■■□□□ 1.04
COL20A1-208ENST00000496810 NT5DC1Q5TFE4 455 aa21.54■■□□□ 1.04
COL20A1-208ENST00000496810 RINT1Q6NUQ1 792 aa21.54■■□□□ 1.04
COL20A1-208ENST00000496810 KANK3Q6NY19 840 aa21.54■■□□□ 1.04
COL20A1-208ENST00000496810 TAS1R3Q7RTX0 852 aa21.54■■□□□ 1.04
COL20A1-208ENST00000496810 TAS1R1Q7RTX1 841 aa21.54■■□□□ 1.04
COL20A1-208ENST00000496810 KIFAP3Q92845 792 aa21.54■■□□□ 1.04
COL20A1-208ENST00000496810 PAAF1Q9BRP4 392 aa21.54■■□□□ 1.04
COL20A1-208ENST00000496810 UBN1Q9NPG3 1134 aa21.54■■□□□ 1.04
COL20A1-208ENST00000496810 SNTG2Q9NY99 539 aa21.54■■□□□ 1.04
COL20A1-208ENST00000496810 PARP2Q9UGN5 583 aa21.54■■□□□ 1.04
COL20A1-208ENST00000496810 DNM3Q9UQ16 869 aa21.54■■□□□ 1.04
COL20A1-208ENST00000496810 FAN1Q9Y2M0 1017 aa21.54■■□□□ 1.04
COL20A1-208ENST00000496810 CITO14578 2027 aa21.53■■□□□ 1.04
COL20A1-208ENST00000496810 PI4K2BG5E9Z4 385 aa21.53■■□□□ 1.04
COL20A1-208ENST00000496810 RECQL4O94761 1208 aa21.53■■□□□ 1.04
COL20A1-208ENST00000496810 EFEMP2O95967 443 aa21.53■■□□□ 1.04
COL20A1-208ENST00000496810 NPTX2P47972 431 aa21.53■■□□□ 1.04
COL20A1-208ENST00000496810 PEX3P56589 373 aa21.53■■□□□ 1.04
COL20A1-208ENST00000496810 PPP2R5AQ15172 486 aa21.53■■□□□ 1.04
COL20A1-208ENST00000496810 TMEM132AQ24JP5 1023 aa21.53■■□□□ 1.04
COL20A1-208ENST00000496810 HYIQ5T013 277 aa21.53■■□□□ 1.04
COL20A1-208ENST00000496810 C1orf186Q6ZWK4 172 aa21.53■■□□□ 1.04
COL20A1-208ENST00000496810 B3GALT6Q96L58 329 aa21.53■■□□□ 1.04
COL20A1-208ENST00000496810 IRAK3Q9Y616 596 aa21.53■■□□□ 1.04
COL20A1-208ENST00000496810 PDCD11Q14690 1871 aaKnown RBP21.53■■□□□ 1.04
COL20A1-208ENST00000496810 TECTAO75443 2155 aa21.53■■□□□ 1.04
COL20A1-208ENST00000496810 FSD2A1L4K1 749 aa21.52■■□□□ 1.04
COL20A1-208ENST00000496810 SFI1A8K8P3 1242 aa21.52■■□□□ 1.04
COL20A1-208ENST00000496810 PTGESO14684 152 aa21.52■■□□□ 1.04
COL20A1-208ENST00000496810 N4BP3O15049 544 aa21.52■■□□□ 1.04
COL20A1-208ENST00000496810 ALDH2P05091 517 aa21.52■■□□□ 1.04
COL20A1-208ENST00000496810 WEE2P0C1S8 567 aa21.52■■□□□ 1.04
COL20A1-208ENST00000496810 TMEM119Q4V9L6 283 aa21.52■■□□□ 1.04
COL20A1-208ENST00000496810 RNF168Q8IYW5 571 aaPredicted RBP21.52■■□□□ 1.04
COL20A1-208ENST00000496810 C12orf76Q8N812 135 aaPredicted RBP21.52■■□□□ 1.04
COL20A1-208ENST00000496810 IFT74Q96LB3 600 aa21.52■■□□□ 1.04
COL20A1-208ENST00000496810 FOXD4L1Q9NU39 408 aa21.52■■□□□ 1.04
COL20A1-208ENST00000496810 MUTYHQ9UIF7 546 aa21.52■■□□□ 1.04
COL20A1-208ENST00000496810 STK24Q9Y6E0 443 aa21.52■■□□□ 1.04
COL20A1-208ENST00000496810 ZMYM2Q9UBW7 1377 aa21.51■■□□□ 1.03
COL20A1-208ENST00000496810 NPHP3-ACAD11A0A0J9YXS1 232 aa21.51■■□□□ 1.03
COL20A1-208ENST00000496810 CCDC169A6NNP5 214 aa21.51■■□□□ 1.03
COL20A1-208ENST00000496810 C2CD2LO14523 706 aa21.51■■□□□ 1.03
COL20A1-208ENST00000496810 LILRB3O75022 631 aa21.51■■□□□ 1.03
COL20A1-208ENST00000496810 CNPP09543 421 aaKnown RBP21.51■■□□□ 1.03
COL20A1-208ENST00000496810 SP100P23497 879 aaPredicted RBP21.51■■□□□ 1.03
COL20A1-208ENST00000496810 GRIK3Q13003 919 aa21.51■■□□□ 1.03
COL20A1-208ENST00000496810 ARL6IP4Q66PJ3 421 aaKnown RBP21.51■■□□□ 1.03
COL20A1-208ENST00000496810 FAM173BQ6P4H8 233 aa21.51■■□□□ 1.03
COL20A1-208ENST00000496810 HACE1Q8IYU2 909 aa21.51■■□□□ 1.03
COL20A1-208ENST00000496810 CEP120Q8N960 986 aa21.51■■□□□ 1.03
COL20A1-208ENST00000496810 SLC22A17Q8WUG5 538 aa21.51■■□□□ 1.03
COL20A1-208ENST00000496810 CASP10Q92851 521 aa21.51■■□□□ 1.03
COL20A1-208ENST00000496810 LRFN3Q9BTN0 628 aa21.51■■□□□ 1.03
COL20A1-208ENST00000496810 HERC2P3Q9BVR0 1158 aa21.51■■□□□ 1.03
COL20A1-208ENST00000496810 C1QTNF1Q9BXJ1 281 aa21.51■■□□□ 1.03
COL20A1-208ENST00000496810 ARHGAP28Q9P2N2 729 aa21.51■■□□□ 1.03
COL20A1-208ENST00000496810 GDAQ9Y2T3 454 aa21.51■■□□□ 1.03
COL20A1-208ENST00000496810 PHLPP2Q6ZVD8 1323 aa21.51■■□□□ 1.03
COL20A1-208ENST00000496810 SOD2P04179 222 aa21.5■■□□□ 1.03
COL20A1-208ENST00000496810 SRGAP2BP0DMP2 458 aa21.5■■□□□ 1.03
COL20A1-208ENST00000496810 COL9A1P20849 921 aa21.5■■□□□ 1.03
COL20A1-208ENST00000496810 SLC12A3P55017 1021 aa21.5■■□□□ 1.03
COL20A1-208ENST00000496810 CACNB1Q02641 598 aaPredicted RBP21.5■■□□□ 1.03
COL20A1-208ENST00000496810 CBX2Q14781 532 aaPredicted RBP21.5■■□□□ 1.03
COL20A1-208ENST00000496810 ATF7IP2Q5U623 682 aa21.5■■□□□ 1.03
COL20A1-208ENST00000496810 BRAPQ7Z569 592 aa21.5■■□□□ 1.03
COL20A1-208ENST00000496810 CABP7Q86V35 215 aa21.5■■□□□ 1.03
COL20A1-208ENST00000496810 RNF135Q8IUD6 432 aa21.5■■□□□ 1.03
COL20A1-208ENST00000496810 POP1Q99575 1024 aaKnown RBP21.5■■□□□ 1.03
COL20A1-208ENST00000496810 CARNS1A5YM72 827 aa21.49■■□□□ 1.03
COL20A1-208ENST00000496810 CASTOR2A6NHX0 329 aa21.49■■□□□ 1.03
COL20A1-208ENST00000496810 LOC730098B7Z3J9 87 aa21.49■■□□□ 1.03
COL20A1-208ENST00000496810 EFNA5P52803 228 aa21.49■■□□□ 1.03
COL20A1-208ENST00000496810 RESTQ13127 1097 aa21.49■■□□□ 1.03
COL20A1-208ENST00000496810 DMP1Q13316 513 aaPredicted RBP21.49■■□□□ 1.03
COL20A1-208ENST00000496810 SF3A1Q15459 793 aaKnown RBP21.49■■□□□ 1.03
COL20A1-208ENST00000496810 NAB2Q15742 525 aa21.49■■□□□ 1.03
COL20A1-208ENST00000496810 HASPINQ8TF76 798 aa21.49■■□□□ 1.03
COL20A1-208ENST00000496810 RPGRIP1Q96KN7 1286 aa21.49■■□□□ 1.03
COL20A1-208ENST00000496810 KLHL5Q96PQ7 755 aa21.49■■□□□ 1.03
COL20A1-208ENST00000496810 RPS6KC1Q96S38 1066 aa21.49■■□□□ 1.03
COL20A1-208ENST00000496810 PHF7Q9BWX1 381 aaPredicted RBP21.49■■□□□ 1.03
COL20A1-208ENST00000496810 GPR62Q9BZJ7 368 aa21.49■■□□□ 1.03
COL20A1-208ENST00000496810 CLIC4Q9Y696 253 aa21.49■■□□□ 1.03
COL20A1-208ENST00000496810 SLC16A4O15374 487 aa21.48■■□□□ 1.03
COL20A1-208ENST00000496810 DCXO43602 365 aa21.48■■□□□ 1.03
COL20A1-208ENST00000496810 PLA2G4BP0C869 781 aa21.48■■□□□ 1.03
COL20A1-208ENST00000496810 SYT1P21579 422 aa21.48■■□□□ 1.03
COL20A1-208ENST00000496810 IGFBP6P24592 240 aaPredicted RBP21.48■■□□□ 1.03
COL20A1-208ENST00000496810 GUCY2CP25092 1073 aa21.48■■□□□ 1.03
COL20A1-208ENST00000496810 GLRA4Q5JXX5 417 aa21.48■■□□□ 1.03
COL20A1-208ENST00000496810 TMEM31Q5JXX7 168 aa21.48■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms