RNA–Protein interactions for RNA: ENST00000496636.1

SH3D21-204, Transcript of SH3 domain containing 21, humanhuman

TSL 3

Gene SH3D21, Length 383 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D21-204ENST00000496636 PALB2Q86YC2 1186 aa10.83□□□□□ -0.68
SH3D21-204ENST00000496636 EXOC8Q8IYI6 725 aa10.83□□□□□ -0.68
SH3D21-204ENST00000496636 CELF5Q8N6W0 485 aaKnown RBP10.83□□□□□ -0.68
SH3D21-204ENST00000496636 BICD2Q8TD16 824 aa10.83□□□□□ -0.68
SH3D21-204ENST00000496636 FGF13Q92913 245 aa10.83□□□□□ -0.68
SH3D21-204ENST00000496636 CCDC136Q96JN2 1154 aa10.83□□□□□ -0.68
SH3D21-204ENST00000496636 RPP25Q9BUL9 199 aaKnown RBP10.83□□□□□ -0.68
SH3D21-204ENST00000496636 ZMYND12Q9H0C1 365 aa10.83□□□□□ -0.68
SH3D21-204ENST00000496636 FAM217BQ9NTX9 383 aaPredicted RBP10.83□□□□□ -0.68
SH3D21-204ENST00000496636 FBXW11Q9UKB1 542 aa10.83□□□□□ -0.68
SH3D21-204ENST00000496636 KCNH3Q9ULD8 1083 aa10.83□□□□□ -0.68
SH3D21-204ENST00000496636 PPME1Q9Y570 386 aa10.83□□□□□ -0.68
SH3D21-204ENST00000496636 COL4A3BPQ9Y5P4 624 aa10.83□□□□□ -0.68
SH3D21-204ENST00000496636 LOC105378220A0A1B0GUY1 285 aaPredicted RBP10.82□□□□□ -0.68
SH3D21-204ENST00000496636 MSH4O15457 936 aa10.82□□□□□ -0.68
SH3D21-204ENST00000496636 MYBP10242 640 aa10.82□□□□□ -0.68
SH3D21-204ENST00000496636 MLH1P40692 756 aa10.82□□□□□ -0.68
SH3D21-204ENST00000496636 AFF1P51825 1210 aaKnown RBP10.82□□□□□ -0.68
SH3D21-204ENST00000496636 SPEM2Q0P670 501 aa10.82□□□□□ -0.68
SH3D21-204ENST00000496636 PFKFB3Q16875 520 aaPredicted RBP10.82□□□□□ -0.68
SH3D21-204ENST00000496636 PPM1LQ5SGD2 360 aa10.82□□□□□ -0.68
SH3D21-204ENST00000496636 MIER3Q7Z3K6 550 aa10.82□□□□□ -0.68
SH3D21-204ENST00000496636 GRASPQ7Z6J2 395 aaPredicted RBP10.82□□□□□ -0.68
SH3D21-204ENST00000496636 SLC7A3Q8WY07 619 aa10.82□□□□□ -0.68
SH3D21-204ENST00000496636 DNASE1L2Q92874 299 aa10.82□□□□□ -0.68
SH3D21-204ENST00000496636 SLC5A5Q92911 643 aa10.82□□□□□ -0.68
SH3D21-204ENST00000496636 CEP89Q96ST8 783 aa10.82□□□□□ -0.68
SH3D21-204ENST00000496636 UNC45AQ9H3U1 944 aa10.82□□□□□ -0.68
SH3D21-204ENST00000496636 IFT122Q9HBG6 1241 aa10.82□□□□□ -0.68
SH3D21-204ENST00000496636 MTF2Q9Y483 593 aaPredicted RBP10.82□□□□□ -0.68
SH3D21-204ENST00000496636 SF3B1O75533 1304 aaKnown RBP eCLIP10.82□□□□□ -0.68
SH3D21-204ENST00000496636 F5P12259 2224 aa10.81□□□□□ -0.68
SH3D21-204ENST00000496636 IGF2RP11717 2491 aa10.81□□□□□ -0.68
SH3D21-204ENST00000496636 ARL5CA6NH57 179 aa10.81□□□□□ -0.68
SH3D21-204ENST00000496636 GOLGA8AA7E2F4 631 aa10.81□□□□□ -0.68
SH3D21-204ENST00000496636 GOLGA8BA8MQT2 603 aa10.81□□□□□ -0.68
SH3D21-204ENST00000496636 MAN2B1O00754 1011 aa10.81□□□□□ -0.68
SH3D21-204ENST00000496636 ECI2O75521 394 aa10.81□□□□□ -0.68
SH3D21-204ENST00000496636 ERLIN2O94905 339 aa10.81□□□□□ -0.68
SH3D21-204ENST00000496636 C8AP07357 584 aa10.81□□□□□ -0.68
SH3D21-204ENST00000496636 HOXA11P31270 313 aaPredicted RBP10.81□□□□□ -0.68
SH3D21-204ENST00000496636 CCR3P51677 355 aa10.81□□□□□ -0.68
SH3D21-204ENST00000496636 SHC2P98077 582 aa10.81□□□□□ -0.68
SH3D21-204ENST00000496636 MTAPQ13126 283 aa10.81□□□□□ -0.68
SH3D21-204ENST00000496636 CSRP2Q16527 193 aa10.81□□□□□ -0.68
SH3D21-204ENST00000496636 UBXN11Q5T124 520 aa10.81□□□□□ -0.68
SH3D21-204ENST00000496636 PDXDC1Q6P996 788 aa10.81□□□□□ -0.68
SH3D21-204ENST00000496636 TSSK4Q6SA08 328 aa10.81□□□□□ -0.68
SH3D21-204ENST00000496636 PRR23CQ6ZRP0 262 aa10.81□□□□□ -0.68
SH3D21-204ENST00000496636 RTL10Q7L3V2 364 aa10.81□□□□□ -0.68
SH3D21-204ENST00000496636 NPAS3Q8IXF0 933 aa10.81□□□□□ -0.68
SH3D21-204ENST00000496636 PSPC1Q8WXF1 523 aaKnown RBP10.81□□□□□ -0.68
SH3D21-204ENST00000496636 GAD1Q99259 594 aa10.81□□□□□ -0.68
SH3D21-204ENST00000496636 LRRC2Q9BYS8 371 aa10.81□□□□□ -0.68
SH3D21-204ENST00000496636 CHRDQ9H2X0 955 aa10.81□□□□□ -0.68
SH3D21-204ENST00000496636 SEMA4GQ9NTN9 838 aa10.81□□□□□ -0.68
SH3D21-204ENST00000496636 ADAM28Q9UKQ2 775 aa10.81□□□□□ -0.68
SH3D21-204ENST00000496636 IPPQ9Y573 584 aa10.81□□□□□ -0.68
SH3D21-204ENST00000496636 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.81□□□□□ -0.68
SH3D21-204ENST00000496636 FRYQ5TBA9 3013 aa10.8□□□□□ -0.68
SH3D21-204ENST00000496636 CCDC196A0A1B0GTZ2 297 aa10.8□□□□□ -0.68
SH3D21-204ENST00000496636 SLC27A2O14975 620 aa10.8□□□□□ -0.68
SH3D21-204ENST00000496636 DKC1O60832 514 aaKnown RBP eCLIP10.8□□□□□ -0.68
SH3D21-204ENST00000496636 TDGF1P13385 188 aa10.8□□□□□ -0.68
SH3D21-204ENST00000496636 CD72P21854 359 aa10.8□□□□□ -0.68
SH3D21-204ENST00000496636 PMLP29590 882 aa10.8□□□□□ -0.68
SH3D21-204ENST00000496636 AXLP30530 894 aa10.8□□□□□ -0.68
SH3D21-204ENST00000496636 SCNN1GP51170 649 aa10.8□□□□□ -0.68
SH3D21-204ENST00000496636 NCBP1Q09161 790 aaKnown RBP10.8□□□□□ -0.68
SH3D21-204ENST00000496636 GRIK3Q13003 919 aa10.8□□□□□ -0.68
SH3D21-204ENST00000496636 IL31Q6EBC2 164 aa10.8□□□□□ -0.68
SH3D21-204ENST00000496636 NOTUMQ6P988 496 aa10.8□□□□□ -0.68
SH3D21-204ENST00000496636 GLYCTKQ8IVS8 523 aa10.8□□□□□ -0.68
SH3D21-204ENST00000496636 KSR1Q8IVT5 923 aa10.8□□□□□ -0.68
SH3D21-204ENST00000496636 SMG8Q8ND04 991 aaKnown RBP10.8□□□□□ -0.68
SH3D21-204ENST00000496636 ST13P5Q8NFI4 369 aaPredicted RBP10.8□□□□□ -0.68
SH3D21-204ENST00000496636 CCDC148Q8NFR7 591 aa10.8□□□□□ -0.68
SH3D21-204ENST00000496636 PIK3R5Q8WYR1 880 aa10.8□□□□□ -0.68
SH3D21-204ENST00000496636 KXD1Q9BQD3 176 aa10.8□□□□□ -0.68
SH3D21-204ENST00000496636 GPR62Q9BZJ7 368 aa10.8□□□□□ -0.68
SH3D21-204ENST00000496636 GDE1Q9NZC3 331 aa10.8□□□□□ -0.68
SH3D21-204ENST00000496636 GIT1Q9Y2X7 761 aa10.8□□□□□ -0.68
SH3D21-204ENST00000496636 ASPMQ8IZT6 3477 aa10.8□□□□□ -0.68
SH3D21-204ENST00000496636 ZZEF1O43149 2961 aa10.8□□□□□ -0.68
SH3D21-204ENST00000496636 TMEM150BA6NC51 233 aa10.79□□□□□ -0.68
SH3D21-204ENST00000496636 DDX11L8A8MPP1 907 aa10.79□□□□□ -0.68
SH3D21-204ENST00000496636 PSMD10O75832 226 aa10.79□□□□□ -0.68
SH3D21-204ENST00000496636 STBD1O95210 358 aa10.79□□□□□ -0.68
SH3D21-204ENST00000496636 IGHDP01880 384 aa10.79□□□□□ -0.68
SH3D21-204ENST00000496636 CNR2P34972 360 aa10.79□□□□□ -0.68
SH3D21-204ENST00000496636 RFC5P40937 340 aa10.79□□□□□ -0.68
SH3D21-204ENST00000496636 USP11P51784 963 aa10.79□□□□□ -0.68
SH3D21-204ENST00000496636 LIMK1P53667 647 aa10.79□□□□□ -0.68
SH3D21-204ENST00000496636 PSMC5P62195 406 aa10.79□□□□□ -0.68
SH3D21-204ENST00000496636 NTHL1P78549 312 aa10.79□□□□□ -0.68
SH3D21-204ENST00000496636 ACAP1Q15027 740 aa10.79□□□□□ -0.68
SH3D21-204ENST00000496636 UVSSAQ2YD98 709 aa10.79□□□□□ -0.68
SH3D21-204ENST00000496636 PABPC1LQ4VXU2 614 aaKnown RBP10.79□□□□□ -0.68
SH3D21-204ENST00000496636 RNF20Q5VTR2 975 aa10.79□□□□□ -0.68
SH3D21-204ENST00000496636 PRR23BQ6ZRT6 265 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms