RNA–Protein interactions for RNA: ENST00000496569.1

HDLBP-246, Transcript of high density lipoprotein binding protein, humanhuman

TSL 4

Gene HDLBP, Length 374 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-246ENST00000496569 MARCKSP29966 332 aaPredicted RBP13.47□□□□□ -0.25
HDLBP-246ENST00000496569 NPTX2P47972 431 aa13.47□□□□□ -0.25
HDLBP-246ENST00000496569 ZP2Q05996 745 aa13.47□□□□□ -0.25
HDLBP-246ENST00000496569 NCBP1Q09161 790 aaKnown RBP13.47□□□□□ -0.25
HDLBP-246ENST00000496569 SMAD4Q13485 552 aaKnown RBP13.47□□□□□ -0.25
HDLBP-246ENST00000496569 SMC1AQ14683 1233 aaKnown RBP13.47□□□□□ -0.25
HDLBP-246ENST00000496569 MAPK6Q16659 721 aa13.47□□□□□ -0.25
HDLBP-246ENST00000496569 FAM187BQ17R55 369 aa13.47□□□□□ -0.25
HDLBP-246ENST00000496569 HYIQ5T013 277 aa13.47□□□□□ -0.25
HDLBP-246ENST00000496569 TAS1R1Q7RTX1 841 aa13.47□□□□□ -0.25
HDLBP-246ENST00000496569 BRAPQ7Z569 592 aa13.47□□□□□ -0.25
HDLBP-246ENST00000496569 COLGALT2Q8IYK4 626 aa13.47□□□□□ -0.25
HDLBP-246ENST00000496569 SMRP1Q8NCR6 262 aa13.47□□□□□ -0.25
HDLBP-246ENST00000496569 CNNM3Q8NE01 707 aa13.47□□□□□ -0.25
HDLBP-246ENST00000496569 KIFAP3Q92845 792 aa13.47□□□□□ -0.25
HDLBP-246ENST00000496569 CDK5RAP3Q96JB5 506 aa13.47□□□□□ -0.25
HDLBP-246ENST00000496569 B3GALT6Q96L58 329 aa13.47□□□□□ -0.25
HDLBP-246ENST00000496569 PAAF1Q9BRP4 392 aa13.47□□□□□ -0.25
HDLBP-246ENST00000496569 C2orf40Q9H1Z8 148 aa13.47□□□□□ -0.25
HDLBP-246ENST00000496569 RAPGEFL1Q9UHV5 662 aa13.47□□□□□ -0.25
HDLBP-246ENST00000496569 MTMR6Q9Y217 621 aa13.47□□□□□ -0.25
HDLBP-246ENST00000496569 FAN1Q9Y2M0 1017 aa13.47□□□□□ -0.25
HDLBP-246ENST00000496569 GDAQ9Y2T3 454 aa13.47□□□□□ -0.25
HDLBP-246ENST00000496569 USP15Q9Y4E8 981 aaPredicted RBP13.47□□□□□ -0.25
HDLBP-246ENST00000496569 FAM86C2PA6NEL3 165 aa13.46□□□□□ -0.25
HDLBP-246ENST00000496569 ACKR2O00590 384 aa13.46□□□□□ -0.25
HDLBP-246ENST00000496569 C2CD2LO14523 706 aa13.46□□□□□ -0.25
HDLBP-246ENST00000496569 N4BP3O15049 544 aa13.46□□□□□ -0.25
HDLBP-246ENST00000496569 NCK2O43639 380 aa13.46□□□□□ -0.25
HDLBP-246ENST00000496569 CLASP2O75122 1294 aaKnown RBP13.46□□□□□ -0.25
HDLBP-246ENST00000496569 WEE2P0C1S8 567 aa13.46□□□□□ -0.25
HDLBP-246ENST00000496569 MYBP10242 640 aa13.46□□□□□ -0.25
HDLBP-246ENST00000496569 HARSP12081 509 aaKnown RBP13.46□□□□□ -0.25
HDLBP-246ENST00000496569 EPCAMP16422 314 aa13.46□□□□□ -0.25
HDLBP-246ENST00000496569 SP100P23497 879 aaPredicted RBP13.46□□□□□ -0.25
HDLBP-246ENST00000496569 SLC12A3P55017 1021 aa13.46□□□□□ -0.25
HDLBP-246ENST00000496569 DSC1Q08554 894 aa13.46□□□□□ -0.25
HDLBP-246ENST00000496569 KCNC3Q14003 757 aa13.46□□□□□ -0.25
HDLBP-246ENST00000496569 PPP2R5AQ15172 486 aa13.46□□□□□ -0.25
HDLBP-246ENST00000496569 PTPAQ15257 358 aa13.46□□□□□ -0.25
HDLBP-246ENST00000496569 PCBP1Q15365 356 aaKnown RBP eCLIP13.46□□□□□ -0.25
HDLBP-246ENST00000496569 SMAD2Q15796 467 aaKnown RBP13.46□□□□□ -0.25
HDLBP-246ENST00000496569 GLRA4Q5JXX5 417 aa13.46□□□□□ -0.25
HDLBP-246ENST00000496569 ARL6IP4Q66PJ3 421 aaKnown RBP13.46□□□□□ -0.25
HDLBP-246ENST00000496569 SYCE2Q6PIF2 218 aa13.46□□□□□ -0.25
HDLBP-246ENST00000496569 DDX53Q86TM3 631 aaKnown RBP13.46□□□□□ -0.25
HDLBP-246ENST00000496569 GJD3Q8N144 294 aa13.46□□□□□ -0.25
HDLBP-246ENST00000496569 C12orf76Q8N812 135 aaPredicted RBP13.46□□□□□ -0.25
HDLBP-246ENST00000496569 MRPL43Q8N983 215 aaKnown RBP13.46□□□□□ -0.25
HDLBP-246ENST00000496569 HASPINQ8TF76 798 aa13.46□□□□□ -0.25
HDLBP-246ENST00000496569 PRIMPOLQ96LW4 560 aa13.46□□□□□ -0.25
HDLBP-246ENST00000496569 CLIC6Q96NY7 704 aa13.46□□□□□ -0.25
HDLBP-246ENST00000496569 NGRNQ9NPE2 291 aaKnown RBP13.46□□□□□ -0.25
HDLBP-246ENST00000496569 BLOC1S4Q9NUP1 217 aa13.46□□□□□ -0.25
HDLBP-246ENST00000496569 GIT1Q9Y2X7 761 aa13.46□□□□□ -0.25
HDLBP-246ENST00000496569 HCFC2Q9Y5Z7 792 aa13.46□□□□□ -0.25
HDLBP-246ENST00000496569 PHLPP2Q6ZVD8 1323 aa13.45□□□□□ -0.26
HDLBP-246ENST00000496569 CASTOR2A6NHX0 329 aa13.45□□□□□ -0.26
HDLBP-246ENST00000496569 PTGESO14684 152 aa13.45□□□□□ -0.26
HDLBP-246ENST00000496569 INPPL1O15357 1258 aa13.45□□□□□ -0.26
HDLBP-246ENST00000496569 CTSAP10619 480 aa13.45□□□□□ -0.26
HDLBP-246ENST00000496569 PLCG1P19174 1290 aa13.45□□□□□ -0.26
HDLBP-246ENST00000496569 IGFBP6P24592 240 aaPredicted RBP13.45□□□□□ -0.26
HDLBP-246ENST00000496569 MCM6Q14566 821 aa13.45□□□□□ -0.26
HDLBP-246ENST00000496569 PTPN14Q15678 1187 aa13.45□□□□□ -0.26
HDLBP-246ENST00000496569 ARSHQ5FYA8 562 aa13.45□□□□□ -0.26
HDLBP-246ENST00000496569 ATF7IP2Q5U623 682 aa13.45□□□□□ -0.26
HDLBP-246ENST00000496569 PDE12Q6L8Q7 609 aaKnown RBP13.45□□□□□ -0.26
HDLBP-246ENST00000496569 ANKRD54Q6NXT1 300 aa13.45□□□□□ -0.26
HDLBP-246ENST00000496569 ZBTB33Q86T24 672 aa13.45□□□□□ -0.26
HDLBP-246ENST00000496569 TMEM130Q8N3G9 435 aa13.45□□□□□ -0.26
HDLBP-246ENST00000496569 SYT2Q8N9I0 419 aaPredicted RBP13.45□□□□□ -0.26
HDLBP-246ENST00000496569 SPRYD3Q8NCJ5 442 aa13.45□□□□□ -0.26
HDLBP-246ENST00000496569 EPSTI1Q96J88 318 aa13.45□□□□□ -0.26
HDLBP-246ENST00000496569 ZBTB45Q96K62 511 aaPredicted RBP13.45□□□□□ -0.26
HDLBP-246ENST00000496569 USP28Q96RU2 1077 aa13.45□□□□□ -0.26
HDLBP-246ENST00000496569 RPS6KC1Q96S38 1066 aa13.45□□□□□ -0.26
HDLBP-246ENST00000496569 TMEM175Q9BSA9 504 aa13.45□□□□□ -0.26
HDLBP-246ENST00000496569 TARS2Q9BW92 718 aaKnown RBP13.45□□□□□ -0.26
HDLBP-246ENST00000496569 KMT5AQ9NQR1 393 aa13.45□□□□□ -0.26
HDLBP-246ENST00000496569 STK24Q9Y6E0 443 aa13.45□□□□□ -0.26
HDLBP-246ENST00000496569 K7ERI5 159 aa13.44□□□□□ -0.26
HDLBP-246ENST00000496569 ALDH2P05091 517 aa13.44□□□□□ -0.26
HDLBP-246ENST00000496569 GUCY2CP25092 1073 aa13.44□□□□□ -0.26
HDLBP-246ENST00000496569 UBA7P41226 1012 aa13.44□□□□□ -0.26
HDLBP-246ENST00000496569 OSTNP61366 133 aa13.44□□□□□ -0.26
HDLBP-246ENST00000496569 COASYQ13057 564 aa13.44□□□□□ -0.26
HDLBP-246ENST00000496569 DMP1Q13316 513 aaPredicted RBP13.44□□□□□ -0.26
HDLBP-246ENST00000496569 PUS10Q3MIT2 529 aaKnown RBP13.44□□□□□ -0.26
HDLBP-246ENST00000496569 SEZ6Q53EL9 994 aa13.44□□□□□ -0.26
HDLBP-246ENST00000496569 GPBP1Q86WP2 473 aa13.44□□□□□ -0.26
HDLBP-246ENST00000496569 INTS4Q96HW7 963 aaKnown RBP13.44□□□□□ -0.26
HDLBP-246ENST00000496569 DRC1Q96MC2 740 aa13.44□□□□□ -0.26
HDLBP-246ENST00000496569 CDCA3Q99618 268 aaPredicted RBP13.44□□□□□ -0.26
HDLBP-246ENST00000496569 REEP2Q9BRK0 252 aa13.44□□□□□ -0.26
HDLBP-246ENST00000496569 CDT1Q9H211 546 aa13.44□□□□□ -0.26
HDLBP-246ENST00000496569 UBN1Q9NPG3 1134 aa13.44□□□□□ -0.26
HDLBP-246ENST00000496569 ARHGAP28Q9P2N2 729 aa13.44□□□□□ -0.26
HDLBP-246ENST00000496569 KANSL3Q9P2N6 904 aa13.44□□□□□ -0.26
HDLBP-246ENST00000496569 FBXO2Q9UK22 296 aaPredicted RBP13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms