RNA–Protein interactions for RNA: ENST00000496567.5

C9orf3-222, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,575 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-222ENST00000496567 A0A0U1RQF3 1178 aa23.77■■□□□ 1.4
C9orf3-222ENST00000496567 MAGEA10P43363 369 aaPredicted RBP23.77■■□□□ 1.4
C9orf3-222ENST00000496567 MLLT1Q03111 559 aaPredicted RBP23.77■■□□□ 1.4
C9orf3-222ENST00000496567 EDRF1Q3B7T1 1238 aa23.77■■□□□ 1.4
C9orf3-222ENST00000496567 ZCWPW2Q504Y3 356 aa23.77■■□□□ 1.4
C9orf3-222ENST00000496567 FOXR2Q6PJQ5 311 aa23.77■■□□□ 1.4
C9orf3-222ENST00000496567 LINC01599Q8WXQ3 324 aa23.77■■□□□ 1.4
C9orf3-222ENST00000496567 FUCA2Q9BTY2 467 aa23.77■■□□□ 1.4
C9orf3-222ENST00000496567 RWDD2AQ9UIY3 292 aa23.77■■□□□ 1.4
C9orf3-222ENST00000496567 C9IYK1 514 aa23.76■■□□□ 1.39
C9orf3-222ENST00000496567 RBAK-RBAKDNI3L0D1 243 aa23.76■■□□□ 1.39
C9orf3-222ENST00000496567 CLIC2O15247 247 aa23.76■■□□□ 1.39
C9orf3-222ENST00000496567 ZNF623O75123 536 aa23.76■■□□□ 1.39
C9orf3-222ENST00000496567 LDHAP00338 332 aaKnown RBP23.76■■□□□ 1.39
C9orf3-222ENST00000496567 RPL13P26373 211 aaKnown RBP23.76■■□□□ 1.39
C9orf3-222ENST00000496567 ERCC5P28715 1186 aaPredicted RBP23.76■■□□□ 1.39
C9orf3-222ENST00000496567 MYBPC2Q14324 1141 aa23.76■■□□□ 1.39
C9orf3-222ENST00000496567 HSP90AA2PQ14568 343 aaPredicted RBP23.76■■□□□ 1.39
C9orf3-222ENST00000496567 NFIL3Q16649 462 aa23.76■■□□□ 1.39
C9orf3-222ENST00000496567 KYAT1Q16773 422 aa23.76■■□□□ 1.39
C9orf3-222ENST00000496567 TMEM240Q5SV17 173 aa23.76■■□□□ 1.39
C9orf3-222ENST00000496567 HACE1Q8IYU2 909 aa23.76■■□□□ 1.39
C9orf3-222ENST00000496567 TMEM174Q8WUU8 243 aa23.76■■□□□ 1.39
C9orf3-222ENST00000496567 CBWD1Q9BRT8 395 aa23.76■■□□□ 1.39
C9orf3-222ENST00000496567 NAT10Q9H0A0 1025 aaKnown RBP23.76■■□□□ 1.39
C9orf3-222ENST00000496567 AGO2Q9UKV8 859 aaKnown RBP23.76■■□□□ 1.39
C9orf3-222ENST00000496567 PCDHB2Q9Y5E7 798 aa23.76■■□□□ 1.39
C9orf3-222ENST00000496567 OGTO15294 1046 aa23.75■■□□□ 1.39
C9orf3-222ENST00000496567 HARSP12081 509 aaKnown RBP23.75■■□□□ 1.39
C9orf3-222ENST00000496567 EPHB4P54760 987 aa23.75■■□□□ 1.39
C9orf3-222ENST00000496567 ANKRD40Q6AI12 368 aa23.75■■□□□ 1.39
C9orf3-222ENST00000496567 OTOP2Q7RTS6 562 aa23.75■■□□□ 1.39
C9orf3-222ENST00000496567 SLC9A9Q8IVB4 645 aa23.75■■□□□ 1.39
C9orf3-222ENST00000496567 BUD13Q9BRD0 619 aaKnown RBP eCLIP23.75■■□□□ 1.395e-10■■■□□ 15.4
C9orf3-222ENST00000496567 ANP32EQ9BTT0 268 aa23.75■■□□□ 1.39
C9orf3-222ENST00000496567 HAPLN2Q9GZV7 340 aa23.75■■□□□ 1.39
C9orf3-222ENST00000496567 MTIF3Q9H2K0 278 aaKnown RBP23.75■■□□□ 1.39
C9orf3-222ENST00000496567 PCIF1Q9H4Z3 704 aa23.75■■□□□ 1.39
C9orf3-222ENST00000496567 LOC101059915A0A1B0GWI6 518 aaPredicted RBP23.74■■□□□ 1.39
C9orf3-222ENST00000496567 H0YGN5 161 aa23.74■■□□□ 1.39
C9orf3-222ENST00000496567 NR3C1P04150 777 aa23.74■■□□□ 1.39
C9orf3-222ENST00000496567 FAM189BP81408 668 aa23.74■■□□□ 1.39
C9orf3-222ENST00000496567 PGBD4Q96DM1 585 aa23.74■■□□□ 1.39
C9orf3-222ENST00000496567 DNAJC25Q9H1X3 360 aa23.74■■□□□ 1.39
C9orf3-222ENST00000496567 HSPBP1Q9NZL4 362 aa23.74■■□□□ 1.39
C9orf3-222ENST00000496567 IPPQ9Y573 584 aa23.74■■□□□ 1.39
C9orf3-222ENST00000496567 MICAL3Q7RTP6 2002 aa23.74■■□□□ 1.39
C9orf3-222ENST00000496567 TRIM49BA6NDI0 452 aa23.74■■□□□ 1.39
C9orf3-222ENST00000496567 EOMESO95936 686 aa23.74■■□□□ 1.39
C9orf3-222ENST00000496567 PMS1P54277 932 aaKnown RBP23.74■■□□□ 1.39
C9orf3-222ENST00000496567 STX17P56962 302 aa23.74■■□□□ 1.39
C9orf3-222ENST00000496567 ANO6Q4KMQ2 910 aa23.74■■□□□ 1.39
C9orf3-222ENST00000496567 MRPL10Q7Z7H8 261 aaKnown RBP23.74■■□□□ 1.39
C9orf3-222ENST00000496567 ECHDC2Q86YB7 292 aa23.74■■□□□ 1.39
C9orf3-222ENST00000496567 THNSL1Q8IYQ7 743 aa23.74■■□□□ 1.39
C9orf3-222ENST00000496567 ELAC1Q9H777 363 aaKnown RBP23.74■■□□□ 1.39
C9orf3-222ENST00000496567 KIAA1586Q9HCI6 787 aa23.74■■□□□ 1.39
C9orf3-222ENST00000496567 DMAC2Q9NW81 257 aa23.74■■□□□ 1.39
C9orf3-222ENST00000496567 AMHP03971 560 aa23.73■■□□□ 1.39
C9orf3-222ENST00000496567 NR2F2P24468 414 aa23.73■■□□□ 1.39
C9orf3-222ENST00000496567 GRM5P41594 1212 aa23.73■■□□□ 1.39
C9orf3-222ENST00000496567 KCNJ6P48051 423 aa23.73■■□□□ 1.39
C9orf3-222ENST00000496567 CYP2J2P51589 502 aa23.73■■□□□ 1.39
C9orf3-222ENST00000496567 FKBP3Q00688 224 aaKnown RBP23.73■■□□□ 1.39
C9orf3-222ENST00000496567 ADAM9Q13443 819 aa23.73■■□□□ 1.39
C9orf3-222ENST00000496567 TTI2Q6NXR4 508 aa23.73■■□□□ 1.39
C9orf3-222ENST00000496567 C11orf57Q6ZUT1 292 aaPredicted RBP23.73■■□□□ 1.39
C9orf3-222ENST00000496567 GPD1LQ8N335 351 aa23.73■■□□□ 1.39
C9orf3-222ENST00000496567 XXYLT1Q8NBI6 393 aa23.73■■□□□ 1.39
C9orf3-222ENST00000496567 SMG8Q8ND04 991 aaKnown RBP23.73■■□□□ 1.39
C9orf3-222ENST00000496567 HERVK_113Q902F9 699 aa23.73■■□□□ 1.39
C9orf3-222ENST00000496567 CCDC94Q9BW85 323 aaPredicted RBP23.73■■□□□ 1.39
C9orf3-222ENST00000496567 ZBBXA8MT70 800 aa23.72■■□□□ 1.39
C9orf3-222ENST00000496567 EXTL3O43909 919 aa23.72■■□□□ 1.39
C9orf3-222ENST00000496567 CAVIN2O95810 425 aa23.72■■□□□ 1.39
C9orf3-222ENST00000496567 STAG3L1P0CL83 205 aa23.72■■□□□ 1.39
C9orf3-222ENST00000496567 WDR5P61964 334 aaKnown RBP23.72■■□□□ 1.39
C9orf3-222ENST00000496567 LRSAM1Q6UWE0 723 aa23.72■■□□□ 1.39
C9orf3-222ENST00000496567 NXF3Q9H4D5 531 aaKnown RBP23.72■■□□□ 1.39
C9orf3-222ENST00000496567 TMEM161AQ9NX61 479 aa23.72■■□□□ 1.39
C9orf3-222ENST00000496567 LRFN2Q9ULH4 789 aa23.72■■□□□ 1.39
C9orf3-222ENST00000496567 PCDHB7Q9Y5E2 793 aa23.72■■□□□ 1.39
C9orf3-222ENST00000496567 CETN3O15182 167 aa23.71■■□□□ 1.39
C9orf3-222ENST00000496567 FAM189A1O60320 539 aa23.71■■□□□ 1.39
C9orf3-222ENST00000496567 EXOC3O60645 756 aa23.71■■□□□ 1.39
C9orf3-222ENST00000496567 CLTAP09496 248 aa23.71■■□□□ 1.39
C9orf3-222ENST00000496567 ITGA4P13612 1032 aa23.71■■□□□ 1.39
C9orf3-222ENST00000496567 LIN28BQ6ZN17 250 aaKnown RBP eCLIP23.71■■□□□ 1.39
C9orf3-222ENST00000496567 ZNF598Q86UK7 904 aaKnown RBP23.71■■□□□ 1.39
C9orf3-222ENST00000496567 CEP120Q8N960 986 aa23.71■■□□□ 1.39
C9orf3-222ENST00000496567 SAAL1Q96ER3 474 aa23.71■■□□□ 1.39
C9orf3-222ENST00000496567 ACAP3Q96P50 834 aa23.71■■□□□ 1.39
C9orf3-222ENST00000496567 GDF15Q99988 308 aa23.71■■□□□ 1.39
C9orf3-222ENST00000496567 FAM213AQ9BRX8 229 aa23.71■■□□□ 1.39
C9orf3-222ENST00000496567 UBN1Q9NPG3 1134 aa23.71■■□□□ 1.39
C9orf3-222ENST00000496567 SNTG2Q9NY99 539 aa23.71■■□□□ 1.39
C9orf3-222ENST00000496567 FRMD4BQ9Y2L6 1034 aa23.71■■□□□ 1.39
C9orf3-222ENST00000496567 HES2Q9Y543 173 aa23.71■■□□□ 1.39
C9orf3-222ENST00000496567 FGFR1OPO95684 399 aaKnown RBP23.7■■□□□ 1.38
C9orf3-222ENST00000496567 IBSPP21815 317 aaPredicted RBP23.7■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms