RNA–Protein interactions for RNA: ENST00000496462.1

U2AF1-212, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 3,973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-212ENST00000496462 BADQ92934 168 aa9.37□□□□□ -0.91
U2AF1-212ENST00000496462 TMEM117Q9H0C3 514 aa9.37□□□□□ -0.91
U2AF1-212ENST00000496462 MMRN2Q9H8L6 949 aa9.37□□□□□ -0.91
U2AF1-212ENST00000496462 ZMYM2Q9UBW7 1377 aa9.37□□□□□ -0.91
U2AF1-212ENST00000496462 HSFX4A0A1B0GTS1 333 aaPredicted RBP9.37□□□□□ -0.91
U2AF1-212ENST00000496462 HSFX3A0A1B0GWH4 333 aaPredicted RBP9.37□□□□□ -0.91
U2AF1-212ENST00000496462 EXTL3O43909 919 aa9.37□□□□□ -0.91
U2AF1-212ENST00000496462 ALDH2P05091 517 aa9.37□□□□□ -0.91
U2AF1-212ENST00000496462 THP07101 528 aa9.37□□□□□ -0.91
U2AF1-212ENST00000496462 DLATP10515 647 aaKnown RBP9.37□□□□□ -0.91
U2AF1-212ENST00000496462 ATP2A2P16615 1042 aaKnown RBP9.37□□□□□ -0.91
U2AF1-212ENST00000496462 LAG3P18627 525 aa9.37□□□□□ -0.91
U2AF1-212ENST00000496462 DUOXA2Q1HG44 320 aa9.37□□□□□ -0.91
U2AF1-212ENST00000496462 EDRF1Q3B7T1 1238 aa9.37□□□□□ -0.91
U2AF1-212ENST00000496462 TXLNBQ8N3L3 684 aa9.37□□□□□ -0.91
U2AF1-212ENST00000496462 KIF12Q96FN5 646 aa9.37□□□□□ -0.91
U2AF1-212ENST00000496462 UROC1Q96N76 676 aa9.37□□□□□ -0.91
U2AF1-212ENST00000496462 MMTAG2Q9BU76 263 aaKnown RBP9.37□□□□□ -0.91
U2AF1-212ENST00000496462 TMEM161AQ9NX61 479 aa9.37□□□□□ -0.91
U2AF1-212ENST00000496462 RBAKQ9NYW8 714 aaPredicted RBP9.37□□□□□ -0.91
U2AF1-212ENST00000496462 INSL6Q9Y581 213 aa9.37□□□□□ -0.91
U2AF1-212ENST00000496462 ZNF236Q9UL36 1845 aa9.37□□□□□ -0.91
U2AF1-212ENST00000496462 NPHP3-ACAD11A0A0J9YXS1 232 aa9.37□□□□□ -0.91
U2AF1-212ENST00000496462 ADCY6O43306 1168 aa9.37□□□□□ -0.91
U2AF1-212ENST00000496462 NR3C1P04150 777 aa9.37□□□□□ -0.91
U2AF1-212ENST00000496462 CDK7P50613 346 aa9.37□□□□□ -0.91
U2AF1-212ENST00000496462 STX17P56962 302 aa9.37□□□□□ -0.91
U2AF1-212ENST00000496462 OTOP2Q7RTS6 562 aa9.37□□□□□ -0.91
U2AF1-212ENST00000496462 LRRC43Q8N309 656 aa9.37□□□□□ -0.91
U2AF1-212ENST00000496462 CCDC127Q96BQ5 260 aa9.37□□□□□ -0.91
U2AF1-212ENST00000496462 SCLYQ96I15 445 aa9.37□□□□□ -0.91
U2AF1-212ENST00000496462 ZNF558Q96NG5 402 aa9.37□□□□□ -0.91
U2AF1-212ENST00000496462 FAM213AQ9BRX8 229 aa9.37□□□□□ -0.91
U2AF1-212ENST00000496462 ST6GALNAC4Q9H4F1 302 aa9.37□□□□□ -0.91
U2AF1-212ENST00000496462 PDLIM7Q9NR12 457 aa9.37□□□□□ -0.91
U2AF1-212ENST00000496462 RWDD2AQ9UIY3 292 aa9.37□□□□□ -0.91
U2AF1-212ENST00000496462 MAN1B1Q9UKM7 699 aa9.37□□□□□ -0.91
U2AF1-212ENST00000496462 SMCHD1A6NHR9 2005 aa9.36□□□□□ -0.91
U2AF1-212ENST00000496462 TMEM150BA6NC51 233 aa9.36□□□□□ -0.91
U2AF1-212ENST00000496462 SARSP49591 514 aaKnown RBP9.36□□□□□ -0.91
U2AF1-212ENST00000496462 POU5F1Q01860 360 aaKnown RBP9.36□□□□□ -0.91
U2AF1-212ENST00000496462 CREMQ03060 361 aa9.36□□□□□ -0.91
U2AF1-212ENST00000496462 TMEM132DQ14C87 1099 aa9.36□□□□□ -0.91
U2AF1-212ENST00000496462 MAP4K3Q8IVH8 894 aa9.36□□□□□ -0.91
U2AF1-212ENST00000496462 SLC43A3Q8NBI5 491 aa9.36□□□□□ -0.91
U2AF1-212ENST00000496462 IQCDQ96DY2 449 aa9.36□□□□□ -0.91
U2AF1-212ENST00000496462 CEP89Q96ST8 783 aa9.36□□□□□ -0.91
U2AF1-212ENST00000496462 MKNK1Q9BUB5 465 aa9.36□□□□□ -0.91
U2AF1-212ENST00000496462 PCIF1Q9H4Z3 704 aa9.36□□□□□ -0.91
U2AF1-212ENST00000496462 ASB7Q9H672 318 aa9.36□□□□□ -0.91
U2AF1-212ENST00000496462 PLEKHA5Q9HAU0 1116 aa9.36□□□□□ -0.91
U2AF1-212ENST00000496462 NOC2LQ9Y3T9 749 aaKnown RBP9.36□□□□□ -0.91
U2AF1-212ENST00000496462 MYO9BQ13459 2157 aa9.36□□□□□ -0.91
U2AF1-212ENST00000496462 ADAMTS3O15072 1205 aa9.36□□□□□ -0.91
U2AF1-212ENST00000496462 DPYDQ12882 1025 aa9.36□□□□□ -0.91
U2AF1-212ENST00000496462 GRAMD1CQ8IYS0 662 aa9.36□□□□□ -0.91
U2AF1-212ENST00000496462 APPL2Q8NEU8 664 aa9.36□□□□□ -0.91
U2AF1-212ENST00000496462 BCAS3Q9H6U6 928 aa9.36□□□□□ -0.91
U2AF1-212ENST00000496462 FAM105AQ9NUU6 356 aa9.36□□□□□ -0.91
U2AF1-212ENST00000496462 FAN1Q9Y2M0 1017 aa9.36□□□□□ -0.91
U2AF1-212ENST00000496462 CEP83Q9Y592 693 aa9.36□□□□□ -0.91
U2AF1-212ENST00000496462 PCDHB2Q9Y5E7 798 aa9.36□□□□□ -0.91
U2AF1-212ENST00000496462 PLXNB2O15031 1838 aa9.36□□□□□ -0.91
U2AF1-212ENST00000496462 RANBP2P49792 3224 aaKnown RBP9.36□□□□□ -0.91
U2AF1-212ENST00000496462 WNT7AO00755 349 aa9.36□□□□□ -0.91
U2AF1-212ENST00000496462 RBP5P82980 135 aa9.36□□□□□ -0.91
U2AF1-212ENST00000496462 GTF2BQ00403 316 aa9.36□□□□□ -0.91
U2AF1-212ENST00000496462 SMC1AQ14683 1233 aaKnown RBP9.36□□□□□ -0.91
U2AF1-212ENST00000496462 IL17AQ16552 155 aa9.36□□□□□ -0.91
U2AF1-212ENST00000496462 FAM187BQ17R55 369 aa9.36□□□□□ -0.91
U2AF1-212ENST00000496462 RUFY4Q6ZNE9 571 aa9.36□□□□□ -0.91
U2AF1-212ENST00000496462 FAM200AQ8TCP9 573 aa9.36□□□□□ -0.91
U2AF1-212ENST00000496462 SRRTQ9BXP5 876 aaKnown RBP9.36□□□□□ -0.91
U2AF1-212ENST00000496462 TRIM5Q9C035 493 aa9.36□□□□□ -0.91
U2AF1-212ENST00000496462 SNX25Q9H3E2 840 aa9.36□□□□□ -0.91
U2AF1-212ENST00000496462 IGKV6-21A0A0C4DH24 114 aa9.35□□□□□ -0.91
U2AF1-212ENST00000496462 FSD2A1L4K1 749 aa9.35□□□□□ -0.91
U2AF1-212ENST00000496462 H7C4K7 107 aa9.35□□□□□ -0.91
U2AF1-212ENST00000496462 CLIC2O15247 247 aa9.35□□□□□ -0.91
U2AF1-212ENST00000496462 SLC16A3O15427 465 aaKnown RBP9.35□□□□□ -0.91
U2AF1-212ENST00000496462 HUS1O60921 280 aa9.35□□□□□ -0.91
U2AF1-212ENST00000496462 NCKAP1LP55160 1127 aa9.35□□□□□ -0.91
U2AF1-212ENST00000496462 FAAP100Q0VG06 881 aa9.35□□□□□ -0.91
U2AF1-212ENST00000496462 NOMO2Q5JPE7 1267 aa9.35□□□□□ -0.91
U2AF1-212ENST00000496462 FAM26DQ5JW98 314 aa9.35□□□□□ -0.91
U2AF1-212ENST00000496462 SPATA1Q5VX52 437 aa9.35□□□□□ -0.91
U2AF1-212ENST00000496462 CCSAPQ6IQ19 270 aaPredicted RBP9.35□□□□□ -0.91
U2AF1-212ENST00000496462 SPAG5Q96R06 1193 aa9.35□□□□□ -0.91
U2AF1-212ENST00000496462 GAS2L1Q99501 681 aaPredicted RBP9.35□□□□□ -0.91
U2AF1-212ENST00000496462 NTPCRQ9BSD7 190 aaKnown RBP9.35□□□□□ -0.91
U2AF1-212ENST00000496462 GOLPH3LQ9H4A5 285 aa9.35□□□□□ -0.91
U2AF1-212ENST00000496462 ELAC1Q9H777 363 aaKnown RBP9.35□□□□□ -0.91
U2AF1-212ENST00000496462 AGPAT5Q9NUQ2 364 aa9.35□□□□□ -0.91
U2AF1-212ENST00000496462 CSF2RAP15509 400 aa9.35□□□□□ -0.91
U2AF1-212ENST00000496462 OR1G1P47890 313 aa9.35□□□□□ -0.91
U2AF1-212ENST00000496462 HABP4Q5JVS0 413 aaKnown RBP9.35□□□□□ -0.91
U2AF1-212ENST00000496462 KSR1Q8IVT5 923 aa9.35□□□□□ -0.91
U2AF1-212ENST00000496462 HSPBP1Q9NZL4 362 aa9.35□□□□□ -0.91
U2AF1-212ENST00000496462 ZBTB39O15060 712 aa9.35□□□□□ -0.91
U2AF1-212ENST00000496462 PIK3CAP42336 1068 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms