RNA–Protein interactions for RNA: ENST00000496438.5

HM13-223, Transcript of histocompatibility minor 13, human

TSL 5

Gene HM13, Length 699 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HM13-223	ENST00000496438	SNRNP35	Q16560	246 aa	Known RBP	13.44	□□□□□ -0.26
HM13-223	ENST00000496438	AMHR2	Q16671	573 aa		13.44	□□□□□ -0.26
HM13-223	ENST00000496438	PTPN21	Q16825	1174 aa		13.44	□□□□□ -0.26
HM13-223	ENST00000496438	TSHZ1	Q6ZSZ6	1077 aa		13.44	□□□□□ -0.26
HM13-223	ENST00000496438	CCDC186	Q7Z3E2	898 aa		13.44	□□□□□ -0.26
HM13-223	ENST00000496438	GPD1L	Q8N335	351 aa		13.44	□□□□□ -0.26
HM13-223	ENST00000496438	NME8	Q8N427	588 aa		13.44	□□□□□ -0.26
HM13-223	ENST00000496438	CCDC150	Q8NCX0	1101 aa		13.44	□□□□□ -0.26
HM13-223	ENST00000496438	NLRP7	Q8WX94	980 aa		13.44	□□□□□ -0.26
HM13-223	ENST00000496438	TRIM44	Q96DX7	344 aa	Predicted RBP	13.44	□□□□□ -0.26
HM13-223	ENST00000496438	ZNF668	Q96K58	619 aa	Predicted RBP	13.44	□□□□□ -0.26
HM13-223	ENST00000496438	SCLT1	Q96NL6	688 aa		13.44	□□□□□ -0.26
HM13-223	ENST00000496438	LBHD1	Q9BQE6	289 aa	Predicted RBP	13.44	□□□□□ -0.26
HM13-223	ENST00000496438	SIK3	Q9Y2K2	1263 aa		13.44	□□□□□ -0.26
HM13-223	ENST00000496438	UCHL5	Q9Y5K5	329 aa	Known RBP eCLIP	13.44	□□□□□ -0.26	7e-9	■■□□□ 12.1
HM13-223	ENST00000496438	GRIN2D	O15399	1336 aa		13.43	□□□□□ -0.26
HM13-223	ENST00000496438		A0A1W2PPC1	479 aa		13.43	□□□□□ -0.26
HM13-223	ENST00000496438	GTPBP10	A4D1E9	387 aa	Known RBP	13.43	□□□□□ -0.26
HM13-223	ENST00000496438	TTLL13P	A6NNM8	815 aa		13.43	□□□□□ -0.26
HM13-223	ENST00000496438	DCDC2C	A8MYV0	355 aa		13.43	□□□□□ -0.26
HM13-223	ENST00000496438	ARVCF	O00192	962 aa		13.43	□□□□□ -0.26
HM13-223	ENST00000496438	EXTL3	O43909	919 aa		13.43	□□□□□ -0.26
HM13-223	ENST00000496438	IQCF3	P0C7M6	154 aa		13.43	□□□□□ -0.26
HM13-223	ENST00000496438	BMP8B	P34820	402 aa		13.43	□□□□□ -0.26
HM13-223	ENST00000496438	MCL1	Q07820	350 aa		13.43	□□□□□ -0.26
HM13-223	ENST00000496438	KCNH2	Q12809	1159 aa		13.43	□□□□□ -0.26
HM13-223	ENST00000496438	SYCP1	Q15431	976 aa		13.43	□□□□□ -0.26
HM13-223	ENST00000496438	DCAF17	Q5H9S7	520 aa	Predicted RBP	13.43	□□□□□ -0.26
HM13-223	ENST00000496438	FIGN	Q5HY92	759 aa		13.43	□□□□□ -0.26
HM13-223	ENST00000496438	GDF6	Q6KF10	455 aa	Predicted RBP	13.43	□□□□□ -0.26
HM13-223	ENST00000496438	ANKRD33	Q7Z3H0	272 aa		13.43	□□□□□ -0.26
HM13-223	ENST00000496438	RPAIN	Q86UA6	219 aa		13.43	□□□□□ -0.26
HM13-223	ENST00000496438	SERINC5	Q86VE9	423 aa		13.43	□□□□□ -0.26
HM13-223	ENST00000496438	CBWD2	Q8IUF1	395 aa		13.43	□□□□□ -0.26
HM13-223	ENST00000496438	ZSWIM2	Q8NEG5	633 aa		13.43	□□□□□ -0.26
HM13-223	ENST00000496438	TMC2	Q8TDI7	906 aa		13.43	□□□□□ -0.26
HM13-223	ENST00000496438	DNAJB3	Q8WWF6	145 aa		13.43	□□□□□ -0.26
HM13-223	ENST00000496438	IQCD	Q96DY2	449 aa		13.43	□□□□□ -0.26
HM13-223	ENST00000496438	SAAL1	Q96ER3	474 aa		13.43	□□□□□ -0.26
HM13-223	ENST00000496438	TOX2	Q96NM4	488 aa		13.43	□□□□□ -0.26
HM13-223	ENST00000496438	MSTO1	Q9BUK6	570 aa		13.43	□□□□□ -0.26
HM13-223	ENST00000496438	GCOM2	Q9BZD3	368 aa	Predicted RBP	13.43	□□□□□ -0.26
HM13-223	ENST00000496438	UBE2O	Q9C0C9	1292 aa	Known RBP	13.43	□□□□□ -0.26
HM13-223	ENST00000496438	HAPLN2	Q9GZV7	340 aa		13.43	□□□□□ -0.26
HM13-223	ENST00000496438	PTPRH	Q9HD43	1115 aa		13.43	□□□□□ -0.26
HM13-223	ENST00000496438	ANKFY1	Q9P2R3	1169 aa		13.43	□□□□□ -0.26
HM13-223	ENST00000496438	AGO2	Q9UKV8	859 aa	Known RBP	13.43	□□□□□ -0.26
HM13-223	ENST00000496438	TNFSF13B	Q9Y275	285 aa		13.43	□□□□□ -0.26
HM13-223	ENST00000496438	USP20	Q9Y2K6	914 aa		13.43	□□□□□ -0.26
HM13-223	ENST00000496438	GOLGA8IP	A6NC78	632 aa		13.42	□□□□□ -0.26
HM13-223	ENST00000496438	GOLGA8J	A6NMD2	632 aa		13.42	□□□□□ -0.26
HM13-223	ENST00000496438	CLDN3	O15551	220 aa		13.42	□□□□□ -0.26
HM13-223	ENST00000496438	B4GALT5	O43286	388 aa		13.42	□□□□□ -0.26
HM13-223	ENST00000496438	FAM189A1	O60320	539 aa		13.42	□□□□□ -0.26
HM13-223	ENST00000496438	LDHA	P00338	332 aa	Known RBP	13.42	□□□□□ -0.26
HM13-223	ENST00000496438	DARS	P14868	501 aa	Known RBP	13.42	□□□□□ -0.26
HM13-223	ENST00000496438	VAMP7	P51809	220 aa		13.42	□□□□□ -0.26
HM13-223	ENST00000496438	CYP24A1	Q07973	514 aa		13.42	□□□□□ -0.26
HM13-223	ENST00000496438	ITGA7	Q13683	1181 aa		13.42	□□□□□ -0.26
HM13-223	ENST00000496438	NOLC1	Q14978	699 aa	Known RBP eCLIP	13.42	□□□□□ -0.26	2e-12	■■□□□ 13
HM13-223	ENST00000496438	KIZ	Q2M2Z5	673 aa		13.42	□□□□□ -0.26
HM13-223	ENST00000496438	FAM47C	Q5HY64	1035 aa		13.42	□□□□□ -0.26
HM13-223	ENST00000496438	ATF7IP2	Q5U623	682 aa		13.42	□□□□□ -0.26
HM13-223	ENST00000496438	TCERG1L	Q5VWI1	586 aa		13.42	□□□□□ -0.26
HM13-223	ENST00000496438	MPZL3	Q6UWV2	235 aa		13.42	□□□□□ -0.26
HM13-223	ENST00000496438	USP37	Q86T82	979 aa		13.42	□□□□□ -0.26
HM13-223	ENST00000496438	ZBTB45	Q96K62	511 aa	Predicted RBP	13.42	□□□□□ -0.26
HM13-223	ENST00000496438	MFSD14A	Q96MC6	490 aa		13.42	□□□□□ -0.26
HM13-223	ENST00000496438	PPP1R16B	Q96T49	567 aa		13.42	□□□□□ -0.26
HM13-223	ENST00000496438	NUP58	Q9BVL2	599 aa		13.42	□□□□□ -0.26
HM13-223	ENST00000496438	TRIM43B	A6NCK2	446 aa		13.41	□□□□□ -0.26
HM13-223	ENST00000496438	ZNF233	A6NK53	670 aa		13.41	□□□□□ -0.26
HM13-223	ENST00000496438	KIAA0355	O15063	1070 aa		13.41	□□□□□ -0.26
HM13-223	ENST00000496438	OGT	O15294	1046 aa		13.41	□□□□□ -0.26
HM13-223	ENST00000496438	PMM2	O15305	246 aa		13.41	□□□□□ -0.26
HM13-223	ENST00000496438	TLR3	O15455	904 aa	Known RBP	13.41	□□□□□ -0.26
HM13-223	ENST00000496438	TSPAN1	O60635	241 aa		13.41	□□□□□ -0.26
HM13-223	ENST00000496438	N4BP1	O75113	896 aa	Known RBP	13.41	□□□□□ -0.26
HM13-223	ENST00000496438	ERLIN2	O94905	339 aa		13.41	□□□□□ -0.26
HM13-223	ENST00000496438	GYPC	P04921	128 aa		13.41	□□□□□ -0.26
HM13-223	ENST00000496438	TPM1	P09493	284 aa		13.41	□□□□□ -0.26
HM13-223	ENST00000496438	TRIM49	P0CI25	452 aa		13.41	□□□□□ -0.26
HM13-223	ENST00000496438	TRIM49C	P0CI26	452 aa		13.41	□□□□□ -0.26
HM13-223	ENST00000496438	SFPQ	P23246	707 aa	Known RBP eCLIP	13.41	□□□□□ -0.26
HM13-223	ENST00000496438	FMO5	P49326	533 aa		13.41	□□□□□ -0.26
HM13-223	ENST00000496438	CDK7	P50613	346 aa		13.41	□□□□□ -0.26
HM13-223	ENST00000496438	FXR1	P51114	621 aa	Known RBP eCLIP	13.41	□□□□□ -0.26
HM13-223	ENST00000496438	CRYBB1	P53674	252 aa	Predicted RBP	13.41	□□□□□ -0.26
HM13-223	ENST00000496438	MRPS6	P82932	125 aa	Known RBP	13.41	□□□□□ -0.26
HM13-223	ENST00000496438	FAAP100	Q0VG06	881 aa		13.41	□□□□□ -0.26
HM13-223	ENST00000496438	ZNF568	Q3ZCX4	644 aa		13.41	□□□□□ -0.26
HM13-223	ENST00000496438	C1orf220	Q5T0J3	134 aa		13.41	□□□□□ -0.26
HM13-223	ENST00000496438	EEF1DP3	Q658K8	133 aa		13.41	□□□□□ -0.26
HM13-223	ENST00000496438	RSPH3	Q86UC2	560 aa		13.41	□□□□□ -0.26
HM13-223	ENST00000496438	PPFIBP1	Q86W92	1011 aa		13.41	□□□□□ -0.26
HM13-223	ENST00000496438	SLC43A3	Q8NBI5	491 aa		13.41	□□□□□ -0.26
HM13-223	ENST00000496438	RDH13	Q8NBN7	331 aa		13.41	□□□□□ -0.26
HM13-223	ENST00000496438	PLEKHO2	Q8TD55	490 aa		13.41	□□□□□ -0.26
HM13-223	ENST00000496438	TRIM43	Q96BQ3	446 aa	Predicted RBP	13.41	□□□□□ -0.26
HM13-223	ENST00000496438	OSMR	Q99650	979 aa		13.41	□□□□□ -0.26

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