RNA–Protein interactions for RNA: ENST00000496360.5

MACF1-223, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 2

Gene MACF1, Length 2,080 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-223ENST00000496360 ARMCX3Q9UH62 379 aaPredicted RBP16.04■□□□□ 0.16
MACF1-223ENST00000496360 PHF24Q9UPV7 400 aa16.04■□□□□ 0.16
MACF1-223ENST00000496360 ADGRA3Q8IWK6 1321 aa16.04■□□□□ 0.16
MACF1-223ENST00000496360 WTIPA6NIX2 430 aaPredicted RBP16.04■□□□□ 0.16
MACF1-223ENST00000496360 CTNNA2P26232 953 aa16.04■□□□□ 0.16
MACF1-223ENST00000496360 RANBP1P43487 201 aa16.04■□□□□ 0.16
MACF1-223ENST00000496360 POLE2P56282 527 aa16.04■□□□□ 0.16
MACF1-223ENST00000496360 RNASELQ05823 741 aaKnown RBP16.04■□□□□ 0.16
MACF1-223ENST00000496360 MGAT5Q09328 741 aa16.04■□□□□ 0.16
MACF1-223ENST00000496360 COASYQ13057 564 aa16.04■□□□□ 0.16
MACF1-223ENST00000496360 SBK1Q52WX2 424 aa16.04■□□□□ 0.16
MACF1-223ENST00000496360 DPY19L2P1Q6NXN4 242 aa16.04■□□□□ 0.16
MACF1-223ENST00000496360 GBP5Q96PP8 586 aa16.04■□□□□ 0.16
MACF1-223ENST00000496360 PIDD1Q9HB75 910 aa16.04■□□□□ 0.16
MACF1-223ENST00000496360 IL1RAPL1Q9NZN1 696 aa16.04■□□□□ 0.16
MACF1-223ENST00000496360 ZMYND8Q9ULU4 1186 aaPredicted RBP16.04■□□□□ 0.16
MACF1-223ENST00000496360 ZBTB12Q9Y330 459 aaPredicted RBP16.04■□□□□ 0.16
MACF1-223ENST00000496360 PASKQ96RG2 1323 aa16.04■□□□□ 0.16
MACF1-223ENST00000496360 SCN9AQ15858 1988 aa16.03■□□□□ 0.16
MACF1-223ENST00000496360 SIGLEC16A6NMB1 481 aa16.03■□□□□ 0.16
MACF1-223ENST00000496360 ITGBL1O95965 494 aaPredicted RBP16.03■□□□□ 0.16
MACF1-223ENST00000496360 MARK3P27448 753 aa16.03■□□□□ 0.16
MACF1-223ENST00000496360 PTPN4P29074 926 aa16.03■□□□□ 0.16
MACF1-223ENST00000496360 RPL21P46778 160 aaKnown RBP16.03■□□□□ 0.16
MACF1-223ENST00000496360 JAM2P57087 298 aa16.03■□□□□ 0.16
MACF1-223ENST00000496360 CHRNDQ07001 517 aa16.03■□□□□ 0.16
MACF1-223ENST00000496360 CYP1B1Q16678 543 aa16.03■□□□□ 0.16
MACF1-223ENST00000496360 LETM2Q2VYF4 491 aa16.03■□□□□ 0.16
MACF1-223ENST00000496360 KRT79Q5XKE5 535 aa16.03■□□□□ 0.16
MACF1-223ENST00000496360 MAP1SQ66K74 1059 aaPredicted RBP16.03■□□□□ 0.16
MACF1-223ENST00000496360 DYMQ7RTS9 669 aa16.03■□□□□ 0.16
MACF1-223ENST00000496360 LONP2Q86WA8 852 aa16.03■□□□□ 0.16
MACF1-223ENST00000496360 NCAPG2Q86XI2 1143 aa16.03■□□□□ 0.16
MACF1-223ENST00000496360 CCDC65Q8IXS2 484 aa16.03■□□□□ 0.16
MACF1-223ENST00000496360 PPFIBP2Q8ND30 876 aa16.03■□□□□ 0.16
MACF1-223ENST00000496360 MORC4Q8TE76 937 aa16.03■□□□□ 0.16
MACF1-223ENST00000496360 PITPNM3Q9BZ71 974 aa16.03■□□□□ 0.16
MACF1-223ENST00000496360 MYLK2Q9H1R3 596 aa16.03■□□□□ 0.16
MACF1-223ENST00000496360 PCMTD2Q9NV79 361 aa16.03■□□□□ 0.16
MACF1-223ENST00000496360 LMCD1Q9NZU5 365 aa16.03■□□□□ 0.16
MACF1-223ENST00000496360 DBR1Q9UK59 544 aaKnown RBP16.03■□□□□ 0.16
MACF1-223ENST00000496360 PCDHA3Q9Y5H8 950 aa16.03■□□□□ 0.16
MACF1-223ENST00000496360 GMEB1Q9Y692 573 aa16.03■□□□□ 0.16
MACF1-223ENST00000496360 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.03■□□□□ 0.16
MACF1-223ENST00000496360 RPS6KL1Q9Y6S9 549 aa16.03■□□□□ 0.16
MACF1-223ENST00000496360 ZNF804BA4D1E1 1349 aa16.03■□□□□ 0.16
MACF1-223ENST00000496360 GTPBP10A4D1E9 387 aaKnown RBP16.03■□□□□ 0.16
MACF1-223ENST00000496360 PYGLP06737 847 aa16.03■□□□□ 0.16
MACF1-223ENST00000496360 VCAM1P19320 739 aa16.03■□□□□ 0.16
MACF1-223ENST00000496360 RPS12P25398 132 aaKnown RBP16.03■□□□□ 0.16
MACF1-223ENST00000496360 SLC18A1P54219 525 aa16.03■□□□□ 0.16
MACF1-223ENST00000496360 TCEAL1Q15170 157 aa16.03■□□□□ 0.16
MACF1-223ENST00000496360 EXOC3L4Q17RC7 722 aa16.03■□□□□ 0.16
MACF1-223ENST00000496360 CGB2Q6NT52 195 aa16.03■□□□□ 0.16
MACF1-223ENST00000496360 NELFCDQ8IXH7 590 aa16.03■□□□□ 0.16
MACF1-223ENST00000496360 RIBC1Q8N443 379 aaPredicted RBP16.03■□□□□ 0.16
MACF1-223ENST00000496360 UBL4BQ8N7F7 174 aa16.03■□□□□ 0.16
MACF1-223ENST00000496360 ANKLE1Q8NAG6 615 aa16.03■□□□□ 0.16
MACF1-223ENST00000496360 ZNF398Q8TD17 642 aa16.03■□□□□ 0.16
MACF1-223ENST00000496360 CTNNBL1Q8WYA6 563 aaPredicted RBP16.03■□□□□ 0.16
MACF1-223ENST00000496360 MTMR9Q96QG7 549 aa16.03■□□□□ 0.16
MACF1-223ENST00000496360 DDX23Q9BUQ8 820 aaKnown RBP16.03■□□□□ 0.16
MACF1-223ENST00000496360 TBC1D10AQ9BXI6 508 aa16.03■□□□□ 0.16
MACF1-223ENST00000496360 MIS12Q9H081 205 aa16.03■□□□□ 0.16
MACF1-223ENST00000496360 NMRK1Q9NWW6 199 aa16.03■□□□□ 0.16
MACF1-223ENST00000496360 ARPP21Q9UBL0 812 aaPredicted RBP16.03■□□□□ 0.16
MACF1-223ENST00000496360 ROBO3Q96MS0 1386 aa16.02■□□□□ 0.16
MACF1-223ENST00000496360 VIL1P09327 827 aaKnown RBP16.02■□□□□ 0.15
MACF1-223ENST00000496360 GALCP54803 685 aa16.02■□□□□ 0.15
MACF1-223ENST00000496360 SF3A3Q12874 501 aaKnown RBP eCLIP16.02■□□□□ 0.15
MACF1-223ENST00000496360 NR1H3Q13133 447 aa16.02■□□□□ 0.15
MACF1-223ENST00000496360 CALCOCO2Q13137 446 aa16.02■□□□□ 0.15
MACF1-223ENST00000496360 RRP1BQ14684 758 aaKnown RBP16.02■□□□□ 0.15
MACF1-223ENST00000496360 LRRC14Q15048 493 aa16.02■□□□□ 0.15
MACF1-223ENST00000496360 CCDC6Q16204 474 aa16.02■□□□□ 0.15
MACF1-223ENST00000496360 DCAF12L1Q5VU92 463 aa16.02■□□□□ 0.15
MACF1-223ENST00000496360 PODNQ7Z5L7 613 aa16.02■□□□□ 0.15
MACF1-223ENST00000496360 ANKRD35Q8N283 1001 aa16.02■□□□□ 0.15
MACF1-223ENST00000496360 STKLD1Q8NE28 680 aa16.02■□□□□ 0.15
MACF1-223ENST00000496360 SLC30A5Q8TAD4 765 aa16.02■□□□□ 0.15
MACF1-223ENST00000496360 GLG1Q92896 1179 aa16.02■□□□□ 0.15
MACF1-223ENST00000496360 KCNK9Q9NPC2 374 aa16.02■□□□□ 0.15
MACF1-223ENST00000496360 WHRNQ9P202 907 aa16.02■□□□□ 0.15
MACF1-223ENST00000496360 MTUS1Q9ULD2 1270 aa16.02■□□□□ 0.15
MACF1-223ENST00000496360 LAMB1P07942 1786 aa16.02■□□□□ 0.15
MACF1-223ENST00000496360 ESYT2A0FGR8 921 aa16.01■□□□□ 0.15
MACF1-223ENST00000496360 DDX3XO00571 662 aaKnown RBP eCLIP16.01■□□□□ 0.15
MACF1-223ENST00000496360 TJP3O95049 919 aa16.01■□□□□ 0.15
MACF1-223ENST00000496360 KRT13P13646 458 aa16.01■□□□□ 0.15
MACF1-223ENST00000496360 BRAFP15056 766 aa16.01■□□□□ 0.15
MACF1-223ENST00000496360 TAC1P20366 129 aa16.01■□□□□ 0.15
MACF1-223ENST00000496360 SLCO1A2P46721 670 aa16.01■□□□□ 0.15
MACF1-223ENST00000496360 CACNA2D1P54289 1103 aa16.01■□□□□ 0.15
MACF1-223ENST00000496360 CAV1Q03135 178 aa16.01■□□□□ 0.15
MACF1-223ENST00000496360 PRPF4BQ13523 1007 aaKnown RBP16.01■□□□□ 0.15
MACF1-223ENST00000496360 ENOX2Q16206 610 aaKnown RBP16.01■□□□□ 0.15
MACF1-223ENST00000496360 PABPC1LQ4VXU2 614 aaKnown RBP16.01■□□□□ 0.15
MACF1-223ENST00000496360 SH2D4BQ5SQS7 431 aa16.01■□□□□ 0.15
MACF1-223ENST00000496360 RNF220Q5VTB9 566 aa16.01■□□□□ 0.15
MACF1-223ENST00000496360 HHATQ5VTY9 493 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms