RNA–Protein interactions for RNA: ENST00000496136.5

ECHDC3-205, Transcript of enoyl-CoA hydratase domain containing 3, humanhuman

TSL 1 (best)

Gene ECHDC3, Length 1,767 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3-205ENST00000496136 XXYLT1Q8NBI6 393 aa23.8■■□□□ 1.4
ECHDC3-205ENST00000496136 MSTO1Q9BUK6 570 aa23.8■■□□□ 1.4
ECHDC3-205ENST00000496136 CDT1Q9H211 546 aa23.8■■□□□ 1.4
ECHDC3-205ENST00000496136 CXCL10P02778 98 aa23.79■■□□□ 1.4
ECHDC3-205ENST00000496136 CASP4P49662 377 aa23.79■■□□□ 1.4
ECHDC3-205ENST00000496136 NOLC1Q14978 699 aaKnown RBP eCLIP23.79■■□□□ 1.4
ECHDC3-205ENST00000496136 FILIP1Q7Z7B0 1213 aa23.79■■□□□ 1.4
ECHDC3-205ENST00000496136 IRF2BP1Q8IU81 584 aa23.79■■□□□ 1.4
ECHDC3-205ENST00000496136 DBF4BQ8NFT6 615 aa23.79■■□□□ 1.4
ECHDC3-205ENST00000496136 SAAL1Q96ER3 474 aa23.79■■□□□ 1.4
ECHDC3-205ENST00000496136 CEP63Q96MT8 703 aa23.79■■□□□ 1.4
ECHDC3-205ENST00000496136 ADPGKQ9BRR6 497 aa23.79■■□□□ 1.4
ECHDC3-205ENST00000496136 GOLGA8IPA6NC78 632 aa23.78■■□□□ 1.4
ECHDC3-205ENST00000496136 GOLGA8JA6NMD2 632 aa23.78■■□□□ 1.4
ECHDC3-205ENST00000496136 KIAA0391O15091 583 aaKnown RBP23.78■■□□□ 1.4
ECHDC3-205ENST00000496136 EXOC3O60645 756 aa23.78■■□□□ 1.4
ECHDC3-205ENST00000496136 AKAP3O75969 853 aa23.78■■□□□ 1.4
ECHDC3-205ENST00000496136 FGFR1OPO95684 399 aaKnown RBP23.78■■□□□ 1.4
ECHDC3-205ENST00000496136 MCF2P10911 925 aa23.78■■□□□ 1.4
ECHDC3-205ENST00000496136 HARSP12081 509 aaKnown RBP23.78■■□□□ 1.4
ECHDC3-205ENST00000496136 ZSCAN20P17040 1043 aaPredicted RBP23.78■■□□□ 1.4
ECHDC3-205ENST00000496136 HSP90AA4PQ58FG1 418 aa23.78■■□□□ 1.4
ECHDC3-205ENST00000496136 UBXN11Q5T124 520 aa23.78■■□□□ 1.4
ECHDC3-205ENST00000496136 CEP135Q66GS9 1140 aa23.78■■□□□ 1.4
ECHDC3-205ENST00000496136 MFSD5Q6N075 450 aa23.78■■□□□ 1.4
ECHDC3-205ENST00000496136 C7orf61Q8IZ16 206 aa23.78■■□□□ 1.4
ECHDC3-205ENST00000496136 FBXL18Q96ME1 805 aa23.78■■□□□ 1.4
ECHDC3-205ENST00000496136 EIF2AQ9BY44 585 aaKnown RBP23.78■■□□□ 1.4
ECHDC3-205ENST00000496136 FAM189A1O60320 539 aa23.78■■□□□ 1.4
ECHDC3-205ENST00000496136 EVI5O60447 810 aa23.78■■□□□ 1.4
ECHDC3-205ENST00000496136 MGEA5O60502 916 aa23.78■■□□□ 1.4
ECHDC3-205ENST00000496136 DSC3Q14574 896 aa23.78■■□□□ 1.4
ECHDC3-205ENST00000496136 TWF2Q6IBS0 349 aaKnown RBP23.78■■□□□ 1.4
ECHDC3-205ENST00000496136 DEFB128Q7Z7B8 93 aa23.78■■□□□ 1.4
ECHDC3-205ENST00000496136 GPD1LQ8N335 351 aa23.78■■□□□ 1.4
ECHDC3-205ENST00000496136 RDH13Q8NBN7 331 aa23.78■■□□□ 1.4
ECHDC3-205ENST00000496136 NOC3LQ8WTT2 800 aaKnown RBP23.78■■□□□ 1.4
ECHDC3-205ENST00000496136 VWCEQ96DN2 955 aa23.78■■□□□ 1.4
ECHDC3-205ENST00000496136 CCDC51Q96ER9 411 aa23.78■■□□□ 1.4
ECHDC3-205ENST00000496136 THAP9Q9H5L6 903 aa23.78■■□□□ 1.4
ECHDC3-205ENST00000496136 PCDH10Q9P2E7 1040 aa23.78■■□□□ 1.4
ECHDC3-205ENST00000496136 PRKAG2Q9UGJ0 569 aa23.78■■□□□ 1.4
ECHDC3-205ENST00000496136 GOLGA6L19H0YKK7 550 aa23.77■■□□□ 1.4
ECHDC3-205ENST00000496136 OGTO15294 1046 aa23.77■■□□□ 1.4
ECHDC3-205ENST00000496136 NPTXRO95502 500 aa23.77■■□□□ 1.4
ECHDC3-205ENST00000496136 LDHAP00338 332 aaKnown RBP23.77■■□□□ 1.4
ECHDC3-205ENST00000496136 ACOT2P49753 483 aa23.77■■□□□ 1.4
ECHDC3-205ENST00000496136 SEZ6Q53EL9 994 aa23.77■■□□□ 1.4
ECHDC3-205ENST00000496136 ZBTB41Q5SVQ8 909 aa23.77■■□□□ 1.4
ECHDC3-205ENST00000496136 CDKAL1Q5VV42 579 aa23.77■■□□□ 1.4
ECHDC3-205ENST00000496136 CRELD2Q6UXH1 353 aaPredicted RBP23.77■■□□□ 1.4
ECHDC3-205ENST00000496136 RTN4RL1Q86UN2 441 aaPredicted RBP23.77■■□□□ 1.4
ECHDC3-205ENST00000496136 THNSL1Q8IYQ7 743 aa23.77■■□□□ 1.4
ECHDC3-205ENST00000496136 FAM213AQ9BRX8 229 aa23.77■■□□□ 1.4
ECHDC3-205ENST00000496136 FRMD4BQ9Y2L6 1034 aa23.77■■□□□ 1.4
ECHDC3-205ENST00000496136 EXTL3O43909 919 aa23.76■■□□□ 1.39
ECHDC3-205ENST00000496136 CSF2RAP15509 400 aa23.76■■□□□ 1.39
ECHDC3-205ENST00000496136 ZNF18P17022 549 aa23.76■■□□□ 1.39
ECHDC3-205ENST00000496136 RFC2P35250 354 aa23.76■■□□□ 1.39
ECHDC3-205ENST00000496136 DCAF4L1Q3SXM0 396 aa23.76■■□□□ 1.39
ECHDC3-205ENST00000496136 CEP120Q8N960 986 aa23.76■■□□□ 1.39
ECHDC3-205ENST00000496136 SEPT8Q92599 483 aa23.76■■□□□ 1.39
ECHDC3-205ENST00000496136 ADAM2Q99965 735 aa23.76■■□□□ 1.39
ECHDC3-205ENST00000496136 TRAIPQ9BWF2 469 aa23.76■■□□□ 1.39
ECHDC3-205ENST00000496136 PSMC2P35998 433 aaKnown RBP23.75■■□□□ 1.39
ECHDC3-205ENST00000496136 APBB1IPQ7Z5R6 666 aaPredicted RBP23.75■■□□□ 1.39
ECHDC3-205ENST00000496136 CBWD2Q8IUF1 395 aa23.75■■□□□ 1.39
ECHDC3-205ENST00000496136 TMEM199Q8N511 208 aa23.75■■□□□ 1.39
ECHDC3-205ENST00000496136 DPF3Q92784 378 aa23.75■■□□□ 1.39
ECHDC3-205ENST00000496136 MKNK1Q9BUB5 465 aa23.75■■□□□ 1.39
ECHDC3-205ENST00000496136 FTHL17Q9BXU8 183 aa23.75■■□□□ 1.39
ECHDC3-205ENST00000496136 KIAA1586Q9HCI6 787 aa23.75■■□□□ 1.39
ECHDC3-205ENST00000496136 TNFSF9P41273 254 aa23.75■■□□□ 1.39
ECHDC3-205ENST00000496136 SNRNP35Q16560 246 aaKnown RBP23.75■■□□□ 1.39
ECHDC3-205ENST00000496136 TCTN1Q2MV58 587 aa23.75■■□□□ 1.39
ECHDC3-205ENST00000496136 APBB2Q92870 758 aa23.75■■□□□ 1.39
ECHDC3-205ENST00000496136 TRIM6Q9C030 488 aaPredicted RBP23.75■■□□□ 1.39
ECHDC3-205ENST00000496136 SLC16A3O15427 465 aaKnown RBP23.74■■□□□ 1.39
ECHDC3-205ENST00000496136 GNA14O95837 355 aa23.74■■□□□ 1.39
ECHDC3-205ENST00000496136 OSTNP61366 133 aa23.74■■□□□ 1.39
ECHDC3-205ENST00000496136 FAM43BQ6ZT52 329 aaPredicted RBP23.74■■□□□ 1.39
ECHDC3-205ENST00000496136 CREBRFQ8IUR6 639 aa23.74■■□□□ 1.39
ECHDC3-205ENST00000496136 TMEM192Q8IY95 271 aa23.74■■□□□ 1.39
ECHDC3-205ENST00000496136 BORCS6Q96GS4 357 aa23.74■■□□□ 1.39
ECHDC3-205ENST00000496136 RGS18Q9NS28 235 aa23.74■■□□□ 1.39
ECHDC3-205ENST00000496136 FAM105AQ9NUU6 356 aa23.74■■□□□ 1.39
ECHDC3-205ENST00000496136 CPSF3Q9UKF6 684 aaKnown RBP23.74■■□□□ 1.39
ECHDC3-205ENST00000496136 HES2Q9Y543 173 aa23.74■■□□□ 1.39
ECHDC3-205ENST00000496136 ZNF233A6NK53 670 aa23.73■■□□□ 1.39
ECHDC3-205ENST00000496136 MAPK13O15264 365 aa23.73■■□□□ 1.39
ECHDC3-205ENST00000496136 STAG3L1P0CL83 205 aa23.73■■□□□ 1.39
ECHDC3-205ENST00000496136 ATP1A3P13637 1013 aa23.73■■□□□ 1.39
ECHDC3-205ENST00000496136 FAM114A1Q8IWE2 563 aa23.73■■□□□ 1.39
ECHDC3-205ENST00000496136 FAM186BQ8IYM0 893 aa23.73■■□□□ 1.39
ECHDC3-205ENST00000496136 SMG8Q8ND04 991 aaKnown RBP23.73■■□□□ 1.39
ECHDC3-205ENST00000496136 PCDHB2Q9Y5E7 798 aa23.73■■□□□ 1.39
ECHDC3-205ENST00000496136 A0A0U1RQF3 1178 aa23.73■■□□□ 1.39
ECHDC3-205ENST00000496136 ADRB2P07550 413 aa23.73■■□□□ 1.39
ECHDC3-205ENST00000496136 EPB41P11171 864 aaKnown RBP23.73■■□□□ 1.39
ECHDC3-205ENST00000496136 CDK11BP21127 795 aaKnown RBP23.73■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms