RNA–Protein interactions for RNA: ENST00000496050.1

SSR3-208, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 4 BASIC

Gene SSR3, Length 579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-208ENST00000496050 CAPN8A6NHC0 703 aa6.84□□□□□ -1.31
SSR3-208ENST00000496050 A6NNZ2 444 aa6.84□□□□□ -1.31
SSR3-208ENST00000496050 CRHR1P34998 444 aa6.84□□□□□ -1.31
SSR3-208ENST00000496050 MAP2K6P52564 334 aa6.84□□□□□ -1.31
SSR3-208ENST00000496050 HK3P52790 923 aa6.84□□□□□ -1.31
SSR3-208ENST00000496050 GPSM2P81274 684 aa6.84□□□□□ -1.31
SSR3-208ENST00000496050 RAB39AQ14964 217 aa6.84□□□□□ -1.31
SSR3-208ENST00000496050 VWA3BQ502W6 1294 aa6.84□□□□□ -1.31
SSR3-208ENST00000496050 FAM26FQ5R3K3 315 aa6.84□□□□□ -1.31
SSR3-208ENST00000496050 RNF220Q5VTB9 566 aa6.84□□□□□ -1.31
SSR3-208ENST00000496050 USP30Q70CQ3 517 aa6.84□□□□□ -1.31
SSR3-208ENST00000496050 CARFQ8N187 725 aa6.84□□□□□ -1.31
SSR3-208ENST00000496050 MORC4Q8TE76 937 aa6.84□□□□□ -1.31
SSR3-208ENST00000496050 LCORQ96JN0 433 aaPredicted RBP6.84□□□□□ -1.31
SSR3-208ENST00000496050 FAM167AQ96KS9 214 aa6.84□□□□□ -1.31
SSR3-208ENST00000496050 SLC6A15Q9H2J7 730 aa6.84□□□□□ -1.31
SSR3-208ENST00000496050 GPRC5DQ9NZD1 345 aa6.84□□□□□ -1.31
SSR3-208ENST00000496050 CALCOCO1Q9P1Z2 691 aa6.84□□□□□ -1.31
SSR3-208ENST00000496050 NR2E3Q9Y5X4 410 aa6.84□□□□□ -1.31
SSR3-208ENST00000496050 A0A088AWK7 358 aa6.83□□□□□ -1.32
SSR3-208ENST00000496050 PLEKHD1A6NEE1 506 aa6.83□□□□□ -1.32
SSR3-208ENST00000496050 GOLIM4O00461 696 aa6.83□□□□□ -1.32
SSR3-208ENST00000496050 JUNP05412 331 aaKnown RBP6.83□□□□□ -1.32
SSR3-208ENST00000496050 GYPEP15421 78 aa6.83□□□□□ -1.32
SSR3-208ENST00000496050 CSF2RBP32927 897 aa6.83□□□□□ -1.32
SSR3-208ENST00000496050 SLC6A9P48067 706 aa6.83□□□□□ -1.32
SSR3-208ENST00000496050 NEK3P51956 506 aa6.83□□□□□ -1.32
SSR3-208ENST00000496050 RRADP55042 308 aa6.83□□□□□ -1.32
SSR3-208ENST00000496050 FGL2Q14314 439 aa6.83□□□□□ -1.32
SSR3-208ENST00000496050 KHDC1Q4VXA5 237 aaKnown RBP6.83□□□□□ -1.32
SSR3-208ENST00000496050 AGBL4Q5VU57 503 aa6.83□□□□□ -1.32
SSR3-208ENST00000496050 KRT40Q6A162 431 aa6.83□□□□□ -1.32
SSR3-208ENST00000496050 PDZD4Q76G19 769 aaPredicted RBP6.83□□□□□ -1.32
SSR3-208ENST00000496050 TMEM151BQ8IW70 566 aa6.83□□□□□ -1.32
SSR3-208ENST00000496050 MSL3Q8N5Y2 521 aaKnown RBP6.83□□□□□ -1.32
SSR3-208ENST00000496050 CCHCR1Q8TD31 782 aa6.83□□□□□ -1.32
SSR3-208ENST00000496050 DACT3Q96B18 629 aaPredicted RBP6.83□□□□□ -1.32
SSR3-208ENST00000496050 LRFN3Q9BTN0 628 aa6.83□□□□□ -1.32
SSR3-208ENST00000496050 CHMP4AQ9BY43 222 aa6.83□□□□□ -1.32
SSR3-208ENST00000496050 B3GNT5Q9BYG0 378 aa6.83□□□□□ -1.32
SSR3-208ENST00000496050 MYH16Q9H6N6 1097 aa6.83□□□□□ -1.32
SSR3-208ENST00000496050 JADE2Q9NQC1 790 aa6.83□□□□□ -1.32
SSR3-208ENST00000496050 SIK3Q9Y2K2 1263 aa6.83□□□□□ -1.32
SSR3-208ENST00000496050 MYBBP1AQ9BQG0 1328 aaKnown RBP6.82□□□□□ -1.32
SSR3-208ENST00000496050 H3BUI4 141 aa6.82□□□□□ -1.32
SSR3-208ENST00000496050 PMM2O15305 246 aa6.82□□□□□ -1.32
SSR3-208ENST00000496050 MTSS1O43312 755 aa6.82□□□□□ -1.32
SSR3-208ENST00000496050 C1QTNF9P0C862 333 aa6.82□□□□□ -1.32
SSR3-208ENST00000496050 ZNF888P0CJ79 500 aaPredicted RBP6.82□□□□□ -1.32
SSR3-208ENST00000496050 VSIG10L2P0DP72 767 aa6.82□□□□□ -1.32
SSR3-208ENST00000496050 SYN1P17600 705 aa6.82□□□□□ -1.32
SSR3-208ENST00000496050 SMARCA1P28370 1054 aa6.82□□□□□ -1.32
SSR3-208ENST00000496050 SREBF1P36956 1147 aa6.82□□□□□ -1.32
SSR3-208ENST00000496050 ADCY7P51828 1080 aa6.82□□□□□ -1.32
SSR3-208ENST00000496050 ATP2C1P98194 919 aaPredicted RBP6.82□□□□□ -1.32
SSR3-208ENST00000496050 DUSP2Q05923 314 aa6.82□□□□□ -1.32
SSR3-208ENST00000496050 GAGE13Q4V321 117 aa6.82□□□□□ -1.32
SSR3-208ENST00000496050 GADL1Q6ZQY3 521 aa6.82□□□□□ -1.32
SSR3-208ENST00000496050 FAM124AQ86V42 546 aa6.82□□□□□ -1.32
SSR3-208ENST00000496050 BHLHE22Q8NFJ8 381 aaPredicted RBP6.82□□□□□ -1.32
SSR3-208ENST00000496050 ADAMTS17Q8TE56 1095 aa6.82□□□□□ -1.32
SSR3-208ENST00000496050 SLC39A13Q96H72 371 aa6.82□□□□□ -1.32
SSR3-208ENST00000496050 DMRTA2Q96SC8 542 aa6.82□□□□□ -1.32
SSR3-208ENST00000496050 SENP6Q9GZR1 1112 aaPredicted RBP6.82□□□□□ -1.32
SSR3-208ENST00000496050 TMEM140Q9NV12 185 aa6.82□□□□□ -1.32
SSR3-208ENST00000496050 TRPS1Q9UHF7 1281 aa6.82□□□□□ -1.32
SSR3-208ENST00000496050 RIPOR2Q9Y4F9 1068 aa6.82□□□□□ -1.32
SSR3-208ENST00000496050 PCDHA3Q9Y5H8 950 aa6.82□□□□□ -1.32
SSR3-208ENST00000496050 NRP1O14786 923 aa6.81□□□□□ -1.32
SSR3-208ENST00000496050 FFAR3O14843 346 aa6.81□□□□□ -1.32
SSR3-208ENST00000496050 PQBP1O60828 265 aaKnown RBP6.81□□□□□ -1.32
SSR3-208ENST00000496050 ITGA10O75578 1167 aa6.81□□□□□ -1.32
SSR3-208ENST00000496050 TOX4O94842 621 aa6.81□□□□□ -1.32
SSR3-208ENST00000496050 IL2RBP14784 551 aa6.81□□□□□ -1.32
SSR3-208ENST00000496050 DDCP20711 480 aa6.81□□□□□ -1.32
SSR3-208ENST00000496050 PTPN7P35236 360 aa6.81□□□□□ -1.32
SSR3-208ENST00000496050 AFF3P51826 1226 aaKnown RBP6.81□□□□□ -1.32
SSR3-208ENST00000496050 BPIFB4P59827 614 aa6.81□□□□□ -1.32
SSR3-208ENST00000496050 KIAA2012Q0VF49 1180 aa6.81□□□□□ -1.32
SSR3-208ENST00000496050 NOGQ13253 232 aa6.81□□□□□ -1.32
SSR3-208ENST00000496050 SEMA5AQ13591 1074 aa6.81□□□□□ -1.32
SSR3-208ENST00000496050 CNN3Q15417 329 aaKnown RBP6.81□□□□□ -1.32
SSR3-208ENST00000496050 VPS72Q15906 364 aa6.81□□□□□ -1.32
SSR3-208ENST00000496050 ZNF568Q3ZCX4 644 aa6.81□□□□□ -1.32
SSR3-208ENST00000496050 GORABQ5T7V8 394 aa6.81□□□□□ -1.32
SSR3-208ENST00000496050 MAEAQ7L5Y9 396 aa6.81□□□□□ -1.32
SSR3-208ENST00000496050 MTFMTQ96DP5 389 aaKnown RBP6.81□□□□□ -1.32
SSR3-208ENST00000496050 TMX3Q96JJ7 454 aa6.81□□□□□ -1.32
SSR3-208ENST00000496050 TNIP3Q96KP6 325 aa6.81□□□□□ -1.32
SSR3-208ENST00000496050 MRGPRX4Q96LA9 322 aa6.81□□□□□ -1.32
SSR3-208ENST00000496050 CDC5LQ99459 802 aaKnown RBP6.81□□□□□ -1.32
SSR3-208ENST00000496050 PTPN18Q99952 460 aa6.81□□□□□ -1.32
SSR3-208ENST00000496050 VRK1Q99986 396 aaPredicted RBP6.81□□□□□ -1.32
SSR3-208ENST00000496050 PDCD2LQ9BRP1 358 aa6.81□□□□□ -1.32
SSR3-208ENST00000496050 KIAA1683Q9H0B3 1180 aa6.81□□□□□ -1.32
SSR3-208ENST00000496050 LANCL2Q9NS86 450 aa6.81□□□□□ -1.32
SSR3-208ENST00000496050 LMBRD1Q9NUN5 540 aa6.81□□□□□ -1.32
SSR3-208ENST00000496050 CFAP69A5D8W1 941 aa6.8□□□□□ -1.32
SSR3-208ENST00000496050 MGEA5O60502 916 aa6.8□□□□□ -1.32
SSR3-208ENST00000496050 KRT1P04264 644 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms