RNA–Protein interactions for RNA: ENST00000494980.5

CHMP2B-205, Transcript of charged multivesicular body protein 2B, humanhuman

TSL 3 BASIC

Gene CHMP2B, Length 1,175 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-205ENST00000494980 ATP4AP20648 1035 aa16.48■□□□□ 0.23
CHMP2B-205ENST00000494980 CCNE1P24864 410 aa16.48■□□□□ 0.23
CHMP2B-205ENST00000494980 ITGB3BPQ13352 177 aaPredicted RBP16.48■□□□□ 0.23
CHMP2B-205ENST00000494980 UAP1L1Q3KQV9 507 aa16.48■□□□□ 0.23
CHMP2B-205ENST00000494980 PABPC1LQ4VXU2 614 aaKnown RBP16.48■□□□□ 0.23
CHMP2B-205ENST00000494980 IFIT1BQ5T764 474 aaKnown RBP16.48■□□□□ 0.23
CHMP2B-205ENST00000494980 CKAP2LQ8IYA6 745 aa16.48■□□□□ 0.23
CHMP2B-205ENST00000494980 NLRP7Q8WX94 980 aa16.48■□□□□ 0.23
CHMP2B-205ENST00000494980 ZNF302Q9NR11 478 aa16.48■□□□□ 0.23
CHMP2B-205ENST00000494980 KCNH3Q9ULD8 1083 aa16.48■□□□□ 0.23
CHMP2B-205ENST00000494980 PIN4Q9Y237 131 aaKnown RBP16.48■□□□□ 0.23
CHMP2B-205ENST00000494980 ATG2BQ96BY7 2078 aa16.47■□□□□ 0.23
CHMP2B-205ENST00000494980 DDX39AO00148 427 aaKnown RBP16.47■□□□□ 0.23
CHMP2B-205ENST00000494980 CCNE2O96020 404 aa16.47■□□□□ 0.23
CHMP2B-205ENST00000494980 OR1G1P47890 313 aa16.47■□□□□ 0.23
CHMP2B-205ENST00000494980 CREB5Q02930 508 aa16.47■□□□□ 0.23
CHMP2B-205ENST00000494980 EFCAB12Q6NXP0 572 aa16.47■□□□□ 0.23
CHMP2B-205ENST00000494980 ABHD15Q6UXT9 468 aa16.47■□□□□ 0.23
CHMP2B-205ENST00000494980 ZNF605Q86T29 641 aa16.47■□□□□ 0.23
CHMP2B-205ENST00000494980 LINC01465Q8N7H1 131 aa16.47■□□□□ 0.23
CHMP2B-205ENST00000494980 IRF7Q92985 503 aa16.47■□□□□ 0.23
CHMP2B-205ENST00000494980 ZNF334Q9HCZ1 680 aaPredicted RBP16.47■□□□□ 0.23
CHMP2B-205ENST00000494980 CHST7Q9NS84 486 aa16.47■□□□□ 0.23
CHMP2B-205ENST00000494980 ZBTB40Q9NUA8 1239 aa16.47■□□□□ 0.23
CHMP2B-205ENST00000494980 FNIP2Q9P278 1114 aa16.47■□□□□ 0.23
CHMP2B-205ENST00000494980 RAXQ9Y2V3 346 aa16.47■□□□□ 0.23
CHMP2B-205ENST00000494980 MRPS23Q9Y3D9 190 aaKnown RBP16.47■□□□□ 0.23
CHMP2B-205ENST00000494980 TTC41PQ6P2S7 1318 aa16.46■□□□□ 0.23
CHMP2B-205ENST00000494980 ABCA7Q8IZY2 2146 aa16.46■□□□□ 0.23
CHMP2B-205ENST00000494980 A0A0D9SFI3 127 aa16.46■□□□□ 0.23
CHMP2B-205ENST00000494980 FAM221BA6H8Z2 402 aa16.46■□□□□ 0.23
CHMP2B-205ENST00000494980 CAVIN2O95810 425 aa16.46■□□□□ 0.23
CHMP2B-205ENST00000494980 FCARP24071 287 aa16.46■□□□□ 0.23
CHMP2B-205ENST00000494980 TMOD1P28289 359 aa16.46■□□□□ 0.23
CHMP2B-205ENST00000494980 RAB27AP51159 221 aa16.46■□□□□ 0.23
CHMP2B-205ENST00000494980 SIM1P81133 766 aaPredicted RBP16.46■□□□□ 0.23
CHMP2B-205ENST00000494980 PLK5Q496M5 336 aa16.46■□□□□ 0.23
CHMP2B-205ENST00000494980 WDR44Q5JSH3 913 aa16.46■□□□□ 0.23
CHMP2B-205ENST00000494980 POTEHQ6S545 545 aa16.46■□□□□ 0.23
CHMP2B-205ENST00000494980 AGMOQ6ZNB7 445 aa16.46■□□□□ 0.23
CHMP2B-205ENST00000494980 ZNF589Q86UQ0 364 aaPredicted RBP16.46■□□□□ 0.23
CHMP2B-205ENST00000494980 ZNF710Q8N1W2 664 aa16.46■□□□□ 0.23
CHMP2B-205ENST00000494980 CHCHD4Q8N4Q1 142 aa16.46■□□□□ 0.23
CHMP2B-205ENST00000494980 ZC3H10Q96K80 434 aaKnown RBP16.46■□□□□ 0.23
CHMP2B-205ENST00000494980 FAM227BQ96M60 508 aa16.46■□□□□ 0.23
CHMP2B-205ENST00000494980 UBAC1Q9BSL1 405 aa16.46■□□□□ 0.23
CHMP2B-205ENST00000494980 TRMT61BQ9BVS5 477 aaKnown RBP16.46■□□□□ 0.23
CHMP2B-205ENST00000494980 SCUBE2Q9NQ36 999 aa16.46■□□□□ 0.23
CHMP2B-205ENST00000494980 HELLSQ9NRZ9 838 aa16.46■□□□□ 0.23
CHMP2B-205ENST00000494980 GDE1Q9NZC3 331 aa16.46■□□□□ 0.23
CHMP2B-205ENST00000494980 ZSWIM5Q9P217 1185 aa16.46■□□□□ 0.23
CHMP2B-205ENST00000494980 PLXNB3Q9ULL4 1909 aa16.45■□□□□ 0.22
CHMP2B-205ENST00000494980 CDX4O14627 284 aaPredicted RBP16.45■□□□□ 0.22
CHMP2B-205ENST00000494980 MAGEB2O15479 319 aa16.45■□□□□ 0.22
CHMP2B-205ENST00000494980 ZNF623O75123 536 aa16.45■□□□□ 0.22
CHMP2B-205ENST00000494980 GDI1P31150 447 aa16.45■□□□□ 0.22
CHMP2B-205ENST00000494980 HOXA9P31269 272 aa16.45■□□□□ 0.22
CHMP2B-205ENST00000494980 NT5C2P49902 561 aa16.45■□□□□ 0.22
CHMP2B-205ENST00000494980 GRM4Q14833 912 aa16.45■□□□□ 0.22
CHMP2B-205ENST00000494980 MAP4K3Q8IVH8 894 aa16.45■□□□□ 0.22
CHMP2B-205ENST00000494980 SLC39A7Q92504 469 aa16.45■□□□□ 0.22
CHMP2B-205ENST00000494980 PGBD4Q96DM1 585 aa16.45■□□□□ 0.22
CHMP2B-205ENST00000494980 UBL7Q96S82 380 aaPredicted RBP16.45■□□□□ 0.22
CHMP2B-205ENST00000494980 CCDC86Q9H6F5 360 aaKnown RBP16.45■□□□□ 0.22
CHMP2B-205ENST00000494980 RSAD1Q9HA92 442 aa16.45■□□□□ 0.22
CHMP2B-205ENST00000494980 DNMT3BQ9UBC3 853 aaKnown RBP16.45■□□□□ 0.22
CHMP2B-205ENST00000494980 SPTAN1Q13813 2472 aaKnown RBP16.45■□□□□ 0.22
CHMP2B-205ENST00000494980 ATMQ13315 3056 aa16.44■□□□□ 0.22
CHMP2B-205ENST00000494980 ARHGAP6O43182 974 aa16.44■□□□□ 0.22
CHMP2B-205ENST00000494980 AKAP3O75969 853 aa16.44■□□□□ 0.22
CHMP2B-205ENST00000494980 CEBPBP17676 345 aa16.44■□□□□ 0.22
CHMP2B-205ENST00000494980 KIF5BP33176 963 aa16.44■□□□□ 0.22
CHMP2B-205ENST00000494980 CREMQ03060 361 aa16.44■□□□□ 0.22
CHMP2B-205ENST00000494980 SLC5A9Q2M3M2 681 aa16.44■□□□□ 0.22
CHMP2B-205ENST00000494980 SWSAP1Q6NVH7 229 aa16.44■□□□□ 0.22
CHMP2B-205ENST00000494980 COLGALT2Q8IYK4 626 aa16.44■□□□□ 0.22
CHMP2B-205ENST00000494980 SLC7A14Q8TBB6 771 aa16.44■□□□□ 0.22
CHMP2B-205ENST00000494980 PIK3R5Q8WYR1 880 aa16.44■□□□□ 0.22
CHMP2B-205ENST00000494980 CRELD1Q96HD1 420 aa16.44■□□□□ 0.22
CHMP2B-205ENST00000494980 SLC32A1Q9H598 525 aa16.44■□□□□ 0.22
CHMP2B-205ENST00000494980 KANSL3Q9P2N6 904 aa16.44■□□□□ 0.22
CHMP2B-205ENST00000494980 PCDHB2Q9Y5E7 798 aa16.44■□□□□ 0.22
CHMP2B-205ENST00000494980 PI4KAP42356 2102 aa16.43■□□□□ 0.22
CHMP2B-205ENST00000494980 VWA8A3KMH1 1905 aa16.43■□□□□ 0.22
CHMP2B-205ENST00000494980 BCLAF3A2AJT9 711 aaKnown RBP16.43■□□□□ 0.22
CHMP2B-205ENST00000494980 EXTL3O43909 919 aa16.43■□□□□ 0.22
CHMP2B-205ENST00000494980 SFPQP23246 707 aaKnown RBP eCLIP16.43■□□□□ 0.22
CHMP2B-205ENST00000494980 UBE2SQ16763 222 aa16.43■□□□□ 0.22
CHMP2B-205ENST00000494980 USP41Q3LFD5 358 aa16.43■□□□□ 0.22
CHMP2B-205ENST00000494980 PRSS55Q6UWB4 352 aaPredicted RBP16.43■□□□□ 0.22
CHMP2B-205ENST00000494980 MXRA8Q9BRK3 442 aa16.43■□□□□ 0.22
CHMP2B-205ENST00000494980 GPR62Q9BZJ7 368 aa16.43■□□□□ 0.22
CHMP2B-205ENST00000494980 DUSP15Q9H1R2 295 aaPredicted RBP16.43■□□□□ 0.22
CHMP2B-205ENST00000494980 AGO4Q9HCK5 861 aaKnown RBP16.43■□□□□ 0.22
CHMP2B-205ENST00000494980 TRPV5Q9NQA5 729 aa16.43■□□□□ 0.22
CHMP2B-205ENST00000494980 CEP131Q9UPN4 1083 aa16.43■□□□□ 0.22
CHMP2B-205ENST00000494980 THADAQ6YHU6 1953 aa16.43■□□□□ 0.22
CHMP2B-205ENST00000494980 H0Y626 953 aa16.42■□□□□ 0.22
CHMP2B-205ENST00000494980 J3QKU1 62 aa16.42■□□□□ 0.22
CHMP2B-205ENST00000494980 NRG2O14511 850 aaPredicted RBP16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms