RNA–Protein interactions for RNA: ENST00000494620.1

SCRN1-209, Transcript of secernin 1, humanhuman

TSL 4

Gene SCRN1, Length 553 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRN1-209ENST00000494620 CDR2LQ86X02 465 aaPredicted RBP12.12□□□□□ -0.47
SCRN1-209ENST00000494620 HSCBQ8IWL3 235 aa12.12□□□□□ -0.47
SCRN1-209ENST00000494620 PLIN2Q99541 437 aa12.12□□□□□ -0.47
SCRN1-209ENST00000494620 MRPL4Q9BYD3 311 aaKnown RBP12.12□□□□□ -0.47
SCRN1-209ENST00000494620 RNF39Q9H2S5 420 aa12.12□□□□□ -0.47
SCRN1-209ENST00000494620 POLD4Q9HCU8 107 aa12.12□□□□□ -0.47
SCRN1-209ENST00000494620 LARSQ9P2J5 1176 aaKnown RBP12.12□□□□□ -0.47
SCRN1-209ENST00000494620 DNAJB4Q9UDY4 337 aa12.12□□□□□ -0.47
SCRN1-209ENST00000494620 BARX2Q9UMQ3 279 aaPredicted RBP12.12□□□□□ -0.47
SCRN1-209ENST00000494620 PRG3Q9Y2Y8 225 aaPredicted RBP12.12□□□□□ -0.47
SCRN1-209ENST00000494620 PCDHGC5Q9Y5F6 944 aa12.12□□□□□ -0.47
SCRN1-209ENST00000494620 IRAK3Q9Y616 596 aa12.12□□□□□ -0.47
SCRN1-209ENST00000494620 CDH23Q9H251 3354 aa12.12□□□□□ -0.47
SCRN1-209ENST00000494620 ZMYM2Q9UBW7 1377 aa12.11□□□□□ -0.47
SCRN1-209ENST00000494620 TBX10O75333 385 aa12.11□□□□□ -0.47
SCRN1-209ENST00000494620 THP07101 528 aa12.11□□□□□ -0.47
SCRN1-209ENST00000494620 SYT1P21579 422 aa12.11□□□□□ -0.47
SCRN1-209ENST00000494620 SCP2P22307 547 aa12.11□□□□□ -0.47
SCRN1-209ENST00000494620 KLRC2P26717 231 aa12.11□□□□□ -0.47
SCRN1-209ENST00000494620 NPTX2P47972 431 aa12.11□□□□□ -0.47
SCRN1-209ENST00000494620 ANKRD54Q6NXT1 300 aa12.11□□□□□ -0.47
SCRN1-209ENST00000494620 COLGALT2Q8IYK4 626 aa12.11□□□□□ -0.47
SCRN1-209ENST00000494620 BSNDQ8WZ55 320 aa12.11□□□□□ -0.47
SCRN1-209ENST00000494620 MSLNLQ96KJ4 702 aa12.11□□□□□ -0.47
SCRN1-209ENST00000494620 ZFP42Q96MM3 310 aa12.11□□□□□ -0.47
SCRN1-209ENST00000494620 NTPCRQ9BSD7 190 aaKnown RBP12.11□□□□□ -0.47
SCRN1-209ENST00000494620 MMTAG2Q9BU76 263 aaKnown RBP12.11□□□□□ -0.47
SCRN1-209ENST00000494620 CCDC94Q9BW85 323 aaPredicted RBP12.11□□□□□ -0.47
SCRN1-209ENST00000494620 ZBP1Q9H171 429 aa12.11□□□□□ -0.47
SCRN1-209ENST00000494620 NXF3Q9H4D5 531 aaKnown RBP12.11□□□□□ -0.47
SCRN1-209ENST00000494620 TOPORSQ9NS56 1045 aaPredicted RBP12.11□□□□□ -0.47
SCRN1-209ENST00000494620 DZANK1Q9NVP4 752 aa12.11□□□□□ -0.47
SCRN1-209ENST00000494620 SNTG2Q9NY99 539 aa12.11□□□□□ -0.47
SCRN1-209ENST00000494620 KLK14Q9P0G3 267 aa12.11□□□□□ -0.47
SCRN1-209ENST00000494620 CLEC1BQ9P126 229 aa12.11□□□□□ -0.47
SCRN1-209ENST00000494620 TNFSF13BQ9Y275 285 aa12.11□□□□□ -0.47
SCRN1-209ENST00000494620 GTF3C3Q9Y5Q9 886 aa12.11□□□□□ -0.47
SCRN1-209ENST00000494620 SFI1A8K8P3 1242 aa12.1□□□□□ -0.47
SCRN1-209ENST00000494620 CLASP2O75122 1294 aaKnown RBP12.1□□□□□ -0.47
SCRN1-209ENST00000494620 SOD2P04179 222 aa12.1□□□□□ -0.47
SCRN1-209ENST00000494620 PLS3P13797 630 aa12.1□□□□□ -0.47
SCRN1-209ENST00000494620 ABCD1P33897 745 aa12.1□□□□□ -0.47
SCRN1-209ENST00000494620 ITIH3Q06033 890 aa12.1□□□□□ -0.47
SCRN1-209ENST00000494620 TUSC3Q13454 348 aa12.1□□□□□ -0.47
SCRN1-209ENST00000494620 ATAT1Q5SQI0 421 aa12.1□□□□□ -0.47
SCRN1-209ENST00000494620 SMRP1Q8NCR6 262 aa12.1□□□□□ -0.47
SCRN1-209ENST00000494620 SPIRE2Q8WWL2 714 aa12.1□□□□□ -0.47
SCRN1-209ENST00000494620 SNX21Q969T3 373 aa12.1□□□□□ -0.47
SCRN1-209ENST00000494620 NECTIN4Q96NY8 510 aa12.1□□□□□ -0.47
SCRN1-209ENST00000494620 KIFC3Q9BVG8 833 aa12.1□□□□□ -0.47
SCRN1-209ENST00000494620 RUSC1Q9BVN2 902 aa12.1□□□□□ -0.47
SCRN1-209ENST00000494620 PHF7Q9BWX1 381 aaPredicted RBP12.1□□□□□ -0.47
SCRN1-209ENST00000494620 CCDC113Q9H0I3 377 aa12.1□□□□□ -0.47
SCRN1-209ENST00000494620 PDZD7Q9H5P4 517 aa12.1□□□□□ -0.47
SCRN1-209ENST00000494620 FOXD4L1Q9NU39 408 aa12.1□□□□□ -0.47
SCRN1-209ENST00000494620 MIOSQ9NXC5 875 aa12.1□□□□□ -0.47
SCRN1-209ENST00000494620 NLRC5Q86WI3 1866 aa12.1□□□□□ -0.47
SCRN1-209ENST00000494620 COL4A4P53420 1690 aaPredicted RBP12.1□□□□□ -0.47
SCRN1-209ENST00000494620 TCF20Q9UGU0 1960 aaKnown RBP12.09□□□□□ -0.47
SCRN1-209ENST00000494620 SLC16A4O15374 487 aa12.09□□□□□ -0.47
SCRN1-209ENST00000494620 STX6O43752 255 aa12.09□□□□□ -0.47
SCRN1-209ENST00000494620 FAM13AO94988 1023 aa12.09□□□□□ -0.47
SCRN1-209ENST00000494620 ADH1AP07327 375 aa12.09□□□□□ -0.47
SCRN1-209ENST00000494620 DDIT3P35638 169 aa12.09□□□□□ -0.47
SCRN1-209ENST00000494620 MATR3P43243 847 aaKnown RBP eCLIP12.09□□□□□ -0.47
SCRN1-209ENST00000494620 GLUD2P49448 558 aa12.09□□□□□ -0.47
SCRN1-209ENST00000494620 AFF1P51825 1210 aaKnown RBP12.09□□□□□ -0.47
SCRN1-209ENST00000494620 CREMQ03060 361 aa12.09□□□□□ -0.47
SCRN1-209ENST00000494620 ZP2Q05996 745 aa12.09□□□□□ -0.47
SCRN1-209ENST00000494620 DSC1Q08554 894 aa12.09□□□□□ -0.47
SCRN1-209ENST00000494620 RAD51AP2Q09MP3 1159 aa12.09□□□□□ -0.47
SCRN1-209ENST00000494620 ELAVL2Q12926 359 aaKnown RBP12.09□□□□□ -0.47
SCRN1-209ENST00000494620 DHX8Q14562 1220 aaKnown RBP12.09□□□□□ -0.47
SCRN1-209ENST00000494620 USP41Q3LFD5 358 aa12.09□□□□□ -0.47
SCRN1-209ENST00000494620 TMEM173Q86WV6 379 aaPredicted RBP12.09□□□□□ -0.47
SCRN1-209ENST00000494620 MYCT1Q8N699 235 aa12.09□□□□□ -0.47
SCRN1-209ENST00000494620 KRI1Q8N9T8 703 aaKnown RBP12.09□□□□□ -0.47
SCRN1-209ENST00000494620 RIPOR3Q96MK2 946 aa12.09□□□□□ -0.47
SCRN1-209ENST00000494620 ZNF396Q96N95 335 aaPredicted RBP12.09□□□□□ -0.47
SCRN1-209ENST00000494620 PNMA5Q96PV4 448 aa12.09□□□□□ -0.47
SCRN1-209ENST00000494620 ZHX3Q9H4I2 956 aa12.09□□□□□ -0.47
SCRN1-209ENST00000494620 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.09□□□□□ -0.47
SCRN1-209ENST00000494620 ODF2LQ9ULJ1 636 aa12.09□□□□□ -0.47
SCRN1-209ENST00000494620 GDAQ9Y2T3 454 aa12.09□□□□□ -0.47
SCRN1-209ENST00000494620 USP15Q9Y4E8 981 aaPredicted RBP12.09□□□□□ -0.47
SCRN1-209ENST00000494620 HCFC2Q9Y5Z7 792 aa12.09□□□□□ -0.47
SCRN1-209ENST00000494620 FNDC1Q4ZHG4 1894 aaPredicted RBP12.08□□□□□ -0.48
SCRN1-209ENST00000494620 BRWD1Q9NSI6 2320 aa12.08□□□□□ -0.48
SCRN1-209ENST00000494620 PI4K2BG5E9Z4 385 aa12.08□□□□□ -0.48
SCRN1-209ENST00000494620 C2CD2LO14523 706 aa12.08□□□□□ -0.48
SCRN1-209ENST00000494620 TRAPPC3O43617 180 aa12.08□□□□□ -0.48
SCRN1-209ENST00000494620 TBCAO75347 108 aaKnown RBP12.08□□□□□ -0.48
SCRN1-209ENST00000494620 RECQL4O94761 1208 aa12.08□□□□□ -0.48
SCRN1-209ENST00000494620 GLP2RO95838 553 aa12.08□□□□□ -0.48
SCRN1-209ENST00000494620 MCF2P10911 925 aa12.08□□□□□ -0.48
SCRN1-209ENST00000494620 MTHFRP42898 656 aa12.08□□□□□ -0.48
SCRN1-209ENST00000494620 SLC12A3P55017 1021 aa12.08□□□□□ -0.48
SCRN1-209ENST00000494620 CEBPZQ03701 1054 aaKnown RBP12.08□□□□□ -0.48
SCRN1-209ENST00000494620 HSP90AA2PQ14568 343 aaPredicted RBP12.08□□□□□ -0.48
SCRN1-209ENST00000494620 CBX2Q14781 532 aaPredicted RBP12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms