RNA–Protein interactions for RNA: ENST00000494612.1

SMC4-224, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 622 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-224ENST00000494612 PPP2R5AQ15172 486 aa5.87□□□□□ -1.47
SMC4-224ENST00000494612 LYSMD2Q8IV50 215 aa5.87□□□□□ -1.47
SMC4-224ENST00000494612 JADE3Q92613 823 aa5.87□□□□□ -1.47
SMC4-224ENST00000494612 RTFDC1Q9BY42 306 aaPredicted RBP5.87□□□□□ -1.47
SMC4-224ENST00000494612 REXO2Q9Y3B8 237 aaKnown RBP5.87□□□□□ -1.47
SMC4-224ENST00000494612 SPEF1Q9Y4P9 236 aa5.87□□□□□ -1.47
SMC4-224ENST00000494612 MRFAP1Q9Y605 127 aa5.87□□□□□ -1.47
SMC4-224ENST00000494612 OPHN1O60890 802 aa5.86□□□□□ -1.47
SMC4-224ENST00000494612 SCGB1D2O95969 90 aa5.86□□□□□ -1.47
SMC4-224ENST00000494612 PFKMP08237 780 aa5.86□□□□□ -1.47
SMC4-224ENST00000494612 COL10A1Q03692 680 aa5.86□□□□□ -1.47
SMC4-224ENST00000494612 PIN1Q13526 163 aaPredicted RBP5.86□□□□□ -1.47
SMC4-224ENST00000494612 EFCAB2Q5VUJ9 269 aa5.86□□□□□ -1.47
SMC4-224ENST00000494612 Q6ZRM9 215 aa5.86□□□□□ -1.47
SMC4-224ENST00000494612 GAREM2Q75VX8 874 aa5.86□□□□□ -1.47
SMC4-224ENST00000494612 CHPFQ8IZ52 775 aa5.86□□□□□ -1.47
SMC4-224ENST00000494612 ANKRD35Q8N283 1001 aa5.86□□□□□ -1.47
SMC4-224ENST00000494612 GAB3Q8WWW8 586 aa5.86□□□□□ -1.47
SMC4-224ENST00000494612 JPH3Q8WXH2 748 aaPredicted RBP5.86□□□□□ -1.47
SMC4-224ENST00000494612 TEKT5Q96M29 485 aa5.86□□□□□ -1.47
SMC4-224ENST00000494612 SLC6A15Q9H2J7 730 aa5.86□□□□□ -1.47
SMC4-224ENST00000494612 GPRC5BQ9NZH0 403 aa5.86□□□□□ -1.47
SMC4-224ENST00000494612 PRSS50Q9UI38 385 aa5.86□□□□□ -1.47
SMC4-224ENST00000494612 DENND2AQ9ULE3 1009 aa5.86□□□□□ -1.47
SMC4-224ENST00000494612 PCDHB6Q9Y5E3 794 aa5.86□□□□□ -1.47
SMC4-224ENST00000494612 GPR45Q9Y5Y3 372 aa5.86□□□□□ -1.47
SMC4-224ENST00000494612 NUMBLQ9Y6R0 609 aa5.86□□□□□ -1.47
SMC4-224ENST00000494612 A0A1W2PRX2 142 aa5.85□□□□□ -1.47
SMC4-224ENST00000494612 C2orf78A6NCI8 922 aa5.85□□□□□ -1.47
SMC4-224ENST00000494612 PF4V1P10720 104 aa5.85□□□□□ -1.47
SMC4-224ENST00000494612 IL12RB1P42701 662 aa5.85□□□□□ -1.47
SMC4-224ENST00000494612 NFE2Q16621 373 aaPredicted RBP5.85□□□□□ -1.47
SMC4-224ENST00000494612 DGKDQ16760 1214 aa5.85□□□□□ -1.47
SMC4-224ENST00000494612 KLHDC10Q6PID8 442 aa5.85□□□□□ -1.47
SMC4-224ENST00000494612 KCNK18Q7Z418 384 aa5.85□□□□□ -1.47
SMC4-224ENST00000494612 TPH2Q8IWU9 490 aa5.85□□□□□ -1.47
SMC4-224ENST00000494612 OR5AN1Q8NGI8 311 aa5.85□□□□□ -1.47
SMC4-224ENST00000494612 AUTS2Q8WXX7 1259 aa5.85□□□□□ -1.47
SMC4-224ENST00000494612 MIEF2Q96C03 454 aa5.85□□□□□ -1.47
SMC4-224ENST00000494612 LRGUKQ96M69 825 aa5.85□□□□□ -1.47
SMC4-224ENST00000494612 ORAI2Q96SN7 254 aa5.85□□□□□ -1.47
SMC4-224ENST00000494612 GPHA2Q96T91 129 aa5.85□□□□□ -1.47
SMC4-224ENST00000494612 IFT122Q9HBG6 1241 aa5.85□□□□□ -1.47
SMC4-224ENST00000494612 KCMF1Q9P0J7 381 aa5.85□□□□□ -1.47
SMC4-224ENST00000494612 EVLQ9UI08 416 aaPredicted RBP5.85□□□□□ -1.47
SMC4-224ENST00000494612 A0A0A6YYJ9 748 aa5.84□□□□□ -1.47
SMC4-224ENST00000494612 TRIM75PA6NK02 468 aa5.84□□□□□ -1.47
SMC4-224ENST00000494612 FOXN1O15353 648 aa5.84□□□□□ -1.47
SMC4-224ENST00000494612 PRPF3O43395 683 aaKnown RBP5.84□□□□□ -1.47
SMC4-224ENST00000494612 TSPAN6O43657 245 aa5.84□□□□□ -1.47
SMC4-224ENST00000494612 IL33O95760 270 aa5.84□□□□□ -1.47
SMC4-224ENST00000494612 HNRNPLP14866 589 aaKnown RBP eCLIP5.84□□□□□ -1.47
SMC4-224ENST00000494612 AGXTP21549 392 aa5.84□□□□□ -1.47
SMC4-224ENST00000494612 C5AR1P21730 350 aa5.84□□□□□ -1.47
SMC4-224ENST00000494612 BMP5P22003 454 aa5.84□□□□□ -1.47
SMC4-224ENST00000494612 RECQLP46063 649 aaPredicted RBP5.84□□□□□ -1.47
SMC4-224ENST00000494612 SESN2P58004 480 aaPredicted RBP5.84□□□□□ -1.47
SMC4-224ENST00000494612 MAP3K12Q12852 859 aa5.84□□□□□ -1.47
SMC4-224ENST00000494612 CRHR2Q13324 411 aa5.84□□□□□ -1.47
SMC4-224ENST00000494612 TCIRG1Q13488 830 aa5.84□□□□□ -1.47
SMC4-224ENST00000494612 TOB2Q14106 344 aaPredicted RBP5.84□□□□□ -1.47
SMC4-224ENST00000494612 CCDC142Q17RM4 750 aa5.84□□□□□ -1.47
SMC4-224ENST00000494612 C14orf80Q86SX3 495 aa5.84□□□□□ -1.47
SMC4-224ENST00000494612 CPA6Q8N4T0 437 aa5.84□□□□□ -1.47
SMC4-224ENST00000494612 TSPEARQ8WU66 669 aa5.84□□□□□ -1.47
SMC4-224ENST00000494612 SLC7A6OSQ96CW6 309 aaPredicted RBP5.84□□□□□ -1.47
SMC4-224ENST00000494612 DYDC2Q96IM9 177 aa5.84□□□□□ -1.47
SMC4-224ENST00000494612 RAX2Q96IS3 184 aa5.84□□□□□ -1.47
SMC4-224ENST00000494612 RHOBTB2Q9BYZ6 727 aa5.84□□□□□ -1.47
SMC4-224ENST00000494612 SAE1Q9UBE0 346 aaPredicted RBP5.84□□□□□ -1.47
SMC4-224ENST00000494612 XPAP23025 273 aaPredicted RBP5.83□□□□□ -1.48
SMC4-224ENST00000494612 MTNR1BP49286 362 aa5.83□□□□□ -1.48
SMC4-224ENST00000494612 MRPS9P82933 396 aaKnown RBP5.83□□□□□ -1.48
SMC4-224ENST00000494612 KIF23Q02241 960 aaPredicted RBP5.83□□□□□ -1.48
SMC4-224ENST00000494612 MGAT5Q09328 741 aa5.83□□□□□ -1.48
SMC4-224ENST00000494612 SPIDRQ14159 915 aa5.83□□□□□ -1.48
SMC4-224ENST00000494612 MUM1Q2TAK8 710 aa5.83□□□□□ -1.48
SMC4-224ENST00000494612 SLC41A1Q8IVJ1 513 aa5.83□□□□□ -1.48
SMC4-224ENST00000494612 CDYL2Q8N8U2 506 aa5.83□□□□□ -1.48
SMC4-224ENST00000494612 OR14C36Q8NHC7 312 aa5.83□□□□□ -1.48
SMC4-224ENST00000494612 NKD2Q969F2 451 aaPredicted RBP5.83□□□□□ -1.48
SMC4-224ENST00000494612 GFM2Q969S9 779 aaKnown RBP5.83□□□□□ -1.48
SMC4-224ENST00000494612 HIST1H2AHQ96KK5 128 aa5.83□□□□□ -1.48
SMC4-224ENST00000494612 HIST1H2AJQ99878 128 aa5.83□□□□□ -1.48
SMC4-224ENST00000494612 TTPALQ9BTX7 342 aa5.83□□□□□ -1.48
SMC4-224ENST00000494612 SLC13A1Q9BZW2 595 aa5.83□□□□□ -1.48
SMC4-224ENST00000494612 PITHD1Q9GZP4 211 aaPredicted RBP5.83□□□□□ -1.48
SMC4-224ENST00000494612 CDH19Q9H159 772 aa5.83□□□□□ -1.48
SMC4-224ENST00000494612 SLTMQ9NWH9 1034 aaKnown RBP eCLIP5.83□□□□□ -1.48
SMC4-224ENST00000494612 ZBTB21Q9ULJ3 1066 aa5.83□□□□□ -1.48
SMC4-224ENST00000494612 SYNPO2Q9UMS6 1093 aa5.83□□□□□ -1.48
SMC4-224ENST00000494612 DNM3Q9UQ16 869 aa5.83□□□□□ -1.48
SMC4-224ENST00000494612 CDY2AQ9Y6F7 541 aa5.83□□□□□ -1.48
SMC4-224ENST00000494612 XDHP47989 1333 aa5.82□□□□□ -1.48
SMC4-224ENST00000494612 A0A0A6YYK5 440 aaPredicted RBP5.82□□□□□ -1.48
SMC4-224ENST00000494612 NDUFS2O75306 463 aa5.82□□□□□ -1.48
SMC4-224ENST00000494612 ABLIM3O94929 683 aa5.82□□□□□ -1.48
SMC4-224ENST00000494612 CD69Q07108 199 aa5.82□□□□□ -1.48
SMC4-224ENST00000494612 FAM111BQ6SJ93 734 aa5.82□□□□□ -1.48
SMC4-224ENST00000494612 HSPBAP1Q96EW2 488 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms