RNA–Protein interactions for RNA: ENST00000494458.1

MSH5-217, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 520 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-217ENST00000494458 AGO2Q9UKV8 859 aaKnown RBP7.39□□□□□ -1.23
MSH5-217ENST00000494458 ZNF215Q9UL58 517 aaPredicted RBP7.39□□□□□ -1.23
MSH5-217ENST00000494458 TNFSF13BQ9Y275 285 aa7.39□□□□□ -1.23
MSH5-217ENST00000494458 BZW2Q9Y6E2 419 aaKnown RBP7.39□□□□□ -1.23
MSH5-217ENST00000494458 SMIM35A0A1B0GVV1 85 aa7.38□□□□□ -1.23
MSH5-217ENST00000494458 ZNF233A6NK53 670 aa7.38□□□□□ -1.23
MSH5-217ENST00000494458 HNRNPDLO14979 420 aaKnown RBP7.38□□□□□ -1.23
MSH5-217ENST00000494458 DYNC1LI2O43237 492 aaPredicted RBP7.38□□□□□ -1.23
MSH5-217ENST00000494458 ZC3H11AO75152 810 aaKnown RBP eCLIP7.38□□□□□ -1.23
MSH5-217ENST00000494458 GFPT2O94808 682 aa7.38□□□□□ -1.23
MSH5-217ENST00000494458 GNRH1P01148 92 aa7.38□□□□□ -1.23
MSH5-217ENST00000494458 C4BPAP04003 597 aaKnown RBP7.38□□□□□ -1.23
MSH5-217ENST00000494458 SERPING1P05155 500 aa7.38□□□□□ -1.23
MSH5-217ENST00000494458 IQCF3P0C7M6 154 aa7.38□□□□□ -1.23
MSH5-217ENST00000494458 ACTN1P12814 892 aa7.38□□□□□ -1.23
MSH5-217ENST00000494458 KRT13P13646 458 aa7.38□□□□□ -1.23
MSH5-217ENST00000494458 CYP2B6P20813 491 aa7.38□□□□□ -1.23
MSH5-217ENST00000494458 MARK3P27448 753 aa7.38□□□□□ -1.23
MSH5-217ENST00000494458 CST5P28325 142 aaPredicted RBP7.38□□□□□ -1.23
MSH5-217ENST00000494458 CYP2C19P33261 490 aa7.38□□□□□ -1.23
MSH5-217ENST00000494458 GTF2F1P35269 517 aaKnown RBP eCLIP7.38□□□□□ -1.23
MSH5-217ENST00000494458 PSMC4P43686 418 aa7.38□□□□□ -1.23
MSH5-217ENST00000494458 FCGRTP55899 365 aa7.38□□□□□ -1.23
MSH5-217ENST00000494458 POLR2FP61218 127 aaKnown RBP7.38□□□□□ -1.23
MSH5-217ENST00000494458 KRT83P78385 493 aa7.38□□□□□ -1.23
MSH5-217ENST00000494458 APBA1Q02410 837 aa7.38□□□□□ -1.23
MSH5-217ENST00000494458 STRN3Q13033 797 aa7.38□□□□□ -1.23
MSH5-217ENST00000494458 TFDP1Q14186 410 aa7.38□□□□□ -1.23
MSH5-217ENST00000494458 HIC1Q14526 733 aa7.38□□□□□ -1.23
MSH5-217ENST00000494458 PTPN14Q15678 1187 aa7.38□□□□□ -1.23
MSH5-217ENST00000494458 MAPK6Q16659 721 aa7.38□□□□□ -1.23
MSH5-217ENST00000494458 TSR1Q2NL82 804 aaKnown RBP7.38□□□□□ -1.23
MSH5-217ENST00000494458 ZACNQ401N2 412 aa7.38□□□□□ -1.23
MSH5-217ENST00000494458 KRT39Q6A163 491 aa7.38□□□□□ -1.23
MSH5-217ENST00000494458 IQCEQ6IPM2 695 aa7.38□□□□□ -1.23
MSH5-217ENST00000494458 CCSAPQ6IQ19 270 aaPredicted RBP7.38□□□□□ -1.23
MSH5-217ENST00000494458 RRAGAQ7L523 313 aa7.38□□□□□ -1.23
MSH5-217ENST00000494458 TRMT1LQ7Z2T5 733 aaKnown RBP7.38□□□□□ -1.23
MSH5-217ENST00000494458 RPAINQ86UA6 219 aa7.38□□□□□ -1.23
MSH5-217ENST00000494458 TLK2Q86UE8 772 aa7.38□□□□□ -1.23
MSH5-217ENST00000494458 ZNF410Q86VK4 478 aa7.38□□□□□ -1.23
MSH5-217ENST00000494458 FMNL3Q8IVF7 1028 aa7.38□□□□□ -1.23
MSH5-217ENST00000494458 SLC30A5Q8TAD4 765 aa7.38□□□□□ -1.23
MSH5-217ENST00000494458 DEPTORQ8TB45 409 aa7.38□□□□□ -1.23
MSH5-217ENST00000494458 TRAPPC12Q8WVT3 735 aa7.38□□□□□ -1.23
MSH5-217ENST00000494458 POMGNT1Q8WZA1 660 aa7.38□□□□□ -1.23
MSH5-217ENST00000494458 ZNF516Q92618 1163 aa7.38□□□□□ -1.23
MSH5-217ENST00000494458 ZBTB45Q96K62 511 aaPredicted RBP7.38□□□□□ -1.23
MSH5-217ENST00000494458 CAPNS2Q96L46 248 aa7.38□□□□□ -1.23
MSH5-217ENST00000494458 CRACR2AQ9BSW2 395 aa7.38□□□□□ -1.23
MSH5-217ENST00000494458 TARS2Q9BW92 718 aaKnown RBP7.38□□□□□ -1.23
MSH5-217ENST00000494458 LSM14BQ9BX40 385 aaKnown RBP7.38□□□□□ -1.23
MSH5-217ENST00000494458 MRPL4Q9BYD3 311 aaKnown RBP7.38□□□□□ -1.23
MSH5-217ENST00000494458 ADAMTS10Q9H324 1103 aa7.38□□□□□ -1.23
MSH5-217ENST00000494458 MINDY3Q9H8M7 445 aa7.38□□□□□ -1.23
MSH5-217ENST00000494458 L2HGDHQ9H9P8 463 aa7.38□□□□□ -1.23
MSH5-217ENST00000494458 ZNHIT6Q9NWK9 470 aaKnown RBP7.38□□□□□ -1.23
MSH5-217ENST00000494458 TRMT1Q9NXH9 659 aaKnown RBP7.38□□□□□ -1.23
MSH5-217ENST00000494458 MYO1AQ9UBC5 1043 aa7.38□□□□□ -1.23
MSH5-217ENST00000494458 APEX2Q9UBZ4 518 aa7.38□□□□□ -1.23
MSH5-217ENST00000494458 AJAP1Q9UKB5 411 aaPredicted RBP7.38□□□□□ -1.23
MSH5-217ENST00000494458 CPSF3Q9UKF6 684 aaKnown RBP7.38□□□□□ -1.23
MSH5-217ENST00000494458 ZHX1Q9UKY1 873 aaPredicted RBP7.38□□□□□ -1.23
MSH5-217ENST00000494458 ABT1Q9ULW3 272 aaKnown RBP7.38□□□□□ -1.23
MSH5-217ENST00000494458 PAXBP1Q9Y5B6 917 aa7.38□□□□□ -1.23
MSH5-217ENST00000494458 MGAMO43451 1857 aa7.37□□□□□ -1.23
MSH5-217ENST00000494458 A0A1B0GUA9 196 aa7.37□□□□□ -1.23
MSH5-217ENST00000494458 LRRIQ4A6NIV6 560 aa7.37□□□□□ -1.23
MSH5-217ENST00000494458 BTNL10A8MVZ5 291 aa7.37□□□□□ -1.23
MSH5-217ENST00000494458 PES1O00541 588 aaKnown RBP7.37□□□□□ -1.23
MSH5-217ENST00000494458 OGTO15294 1046 aa7.37□□□□□ -1.23
MSH5-217ENST00000494458 B4GALT4O60513 344 aa7.37□□□□□ -1.23
MSH5-217ENST00000494458 GPR32O75388 356 aa7.37□□□□□ -1.23
MSH5-217ENST00000494458 PLEKP08567 350 aaPredicted RBP7.37□□□□□ -1.23
MSH5-217ENST00000494458 ZNF286BP0CG31 522 aa7.37□□□□□ -1.23
MSH5-217ENST00000494458 TRIM49P0CI25 452 aa7.37□□□□□ -1.23
MSH5-217ENST00000494458 TRIM49CP0CI26 452 aa7.37□□□□□ -1.23
MSH5-217ENST00000494458 CHRM1P11229 460 aaPredicted RBP7.37□□□□□ -1.23
MSH5-217ENST00000494458 TNNT1P13805 278 aa7.37□□□□□ -1.23
MSH5-217ENST00000494458 AKR1A1P14550 325 aa7.37□□□□□ -1.23
MSH5-217ENST00000494458 TMOD1P28289 359 aa7.37□□□□□ -1.23
MSH5-217ENST00000494458 CYLC1P35663 651 aaPredicted RBP7.37□□□□□ -1.23
MSH5-217ENST00000494458 FLT3LGP49771 235 aa7.37□□□□□ -1.23
MSH5-217ENST00000494458 LIG4P49917 911 aa7.37□□□□□ -1.23
MSH5-217ENST00000494458 CPT1AP50416 773 aa7.37□□□□□ -1.23
MSH5-217ENST00000494458 AP3M2P53677 418 aa7.37□□□□□ -1.23
MSH5-217ENST00000494458 NLRP11P59045 1033 aaKnown RBP7.37□□□□□ -1.23
MSH5-217ENST00000494458 PURAQ00577 322 aaKnown RBP7.37□□□□□ -1.23
MSH5-217ENST00000494458 SP3Q02447 781 aa7.37□□□□□ -1.23
MSH5-217ENST00000494458 GCNT1Q02742 428 aa7.37□□□□□ -1.23
MSH5-217ENST00000494458 PPFIA1Q13136 1202 aa7.37□□□□□ -1.23
MSH5-217ENST00000494458 PRPF4BQ13523 1007 aaKnown RBP7.37□□□□□ -1.23
MSH5-217ENST00000494458 KIF22Q14807 665 aa7.37□□□□□ -1.23
MSH5-217ENST00000494458 GRIK4Q16099 956 aa7.37□□□□□ -1.23
MSH5-217ENST00000494458 SLC9C1Q4G0N8 1177 aa7.37□□□□□ -1.23
MSH5-217ENST00000494458 C10orf76Q5T2E6 689 aa7.37□□□□□ -1.23
MSH5-217ENST00000494458 SFMBT2Q5VUG0 894 aa7.37□□□□□ -1.23
MSH5-217ENST00000494458 SV2AQ7L0J3 742 aa7.37□□□□□ -1.23
MSH5-217ENST00000494458 SRGAP1Q7Z6B7 1085 aa7.37□□□□□ -1.23
MSH5-217ENST00000494458 USP37Q86T82 979 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms