RNA–Protein interactions for RNA: ENST00000494402.5

SNX13-210, Transcript of sorting nexin 13, humanhuman

TSL 3

Gene SNX13, Length 453 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-210ENST00000494402 TATDN1Q6P1N9 297 aa7.58□□□□□ -1.2
SNX13-210ENST00000494402 KLHDC10Q6PID8 442 aa7.58□□□□□ -1.2
SNX13-210ENST00000494402 FBXO38Q6PIJ6 1188 aa7.58□□□□□ -1.2
SNX13-210ENST00000494402 ABRAXAS1Q6UWZ7 409 aa7.58□□□□□ -1.2
SNX13-210ENST00000494402 ESPNLQ6ZVH7 1005 aa7.58□□□□□ -1.2
SNX13-210ENST00000494402 MCM10Q7L590 875 aa7.58□□□□□ -1.2
SNX13-210ENST00000494402 KSR1Q8IVT5 923 aa7.58□□□□□ -1.2
SNX13-210ENST00000494402 SAMD14Q8IZD0 417 aaPredicted RBP7.58□□□□□ -1.2
SNX13-210ENST00000494402 CCAR2Q8N163 923 aaKnown RBP7.58□□□□□ -1.2
SNX13-210ENST00000494402 RUFY2Q8WXA3 655 aa7.58□□□□□ -1.2
SNX13-210ENST00000494402 HDAC10Q969S8 669 aa7.58□□□□□ -1.2
SNX13-210ENST00000494402 IQCDQ96DY2 449 aa7.58□□□□□ -1.2
SNX13-210ENST00000494402 ACE2Q9BYF1 805 aaPredicted RBP7.58□□□□□ -1.2
SNX13-210ENST00000494402 FOXQ1Q9C009 403 aa7.58□□□□□ -1.2
SNX13-210ENST00000494402 ATP13A2Q9NQ11 1180 aa7.58□□□□□ -1.2
SNX13-210ENST00000494402 NDFIP2Q9NV92 336 aa7.58□□□□□ -1.2
SNX13-210ENST00000494402 TMOD4Q9NZQ9 345 aa7.58□□□□□ -1.2
SNX13-210ENST00000494402 FRRS1LQ9P0K9 344 aa7.58□□□□□ -1.2
SNX13-210ENST00000494402 RASAL2Q9UJF2 1139 aa7.58□□□□□ -1.2
SNX13-210ENST00000494402 RPS6KA6Q9UK32 745 aa7.58□□□□□ -1.2
SNX13-210ENST00000494402 PCDHA2Q9Y5H9 948 aa7.58□□□□□ -1.2
SNX13-210ENST00000494402 MYO1BO43795 1136 aa7.57□□□□□ -1.2
SNX13-210ENST00000494402 FAM155BO75949 473 aa7.57□□□□□ -1.2
SNX13-210ENST00000494402 MT-ND3P03897 115 aa7.57□□□□□ -1.2
SNX13-210ENST00000494402 THBS1P07996 1170 aa7.57□□□□□ -1.2
SNX13-210ENST00000494402 WASP42768 502 aa7.57□□□□□ -1.2
SNX13-210ENST00000494402 MSH2P43246 934 aa7.57□□□□□ -1.2
SNX13-210ENST00000494402 IFI35P80217 286 aaPredicted RBP7.57□□□□□ -1.2
SNX13-210ENST00000494402 EIF4A2Q14240 407 aaKnown RBP7.57□□□□□ -1.2
SNX13-210ENST00000494402 UBE3CQ15386 1083 aa7.57□□□□□ -1.2
SNX13-210ENST00000494402 PITRM1Q5JRX3 1037 aa7.57□□□□□ -1.2
SNX13-210ENST00000494402 METTL24Q5JXM2 366 aa7.57□□□□□ -1.2
SNX13-210ENST00000494402 ARMC4Q5T2S8 1044 aa7.57□□□□□ -1.2
SNX13-210ENST00000494402 FAM182BQ5T319 152 aa7.57□□□□□ -1.2
SNX13-210ENST00000494402 TIGD7Q6NT04 549 aaPredicted RBP7.57□□□□□ -1.2
SNX13-210ENST00000494402 CNSTQ6PJW8 725 aa7.57□□□□□ -1.2
SNX13-210ENST00000494402 UNC5DQ6UXZ4 953 aa7.57□□□□□ -1.2
SNX13-210ENST00000494402 DNAJB7Q7Z6W7 309 aaPredicted RBP7.57□□□□□ -1.2
SNX13-210ENST00000494402 NOSTRINQ8IVI9 506 aa7.57□□□□□ -1.2
SNX13-210ENST00000494402 DZIP1LQ8IYY4 767 aaKnown RBP7.57□□□□□ -1.2
SNX13-210ENST00000494402 RTKN2Q8IZC4 609 aa7.57□□□□□ -1.2
SNX13-210ENST00000494402 DNAJB8Q8NHS0 232 aa7.57□□□□□ -1.2
SNX13-210ENST00000494402 CYP2W1Q8TAV3 490 aa7.57□□□□□ -1.2
SNX13-210ENST00000494402 OTUD7AQ8TE49 926 aaPredicted RBP7.57□□□□□ -1.2
SNX13-210ENST00000494402 CREB3L4Q8TEY5 395 aa7.57□□□□□ -1.2
SNX13-210ENST00000494402 RNF141Q8WVD5 230 aa7.57□□□□□ -1.2
SNX13-210ENST00000494402 NRG4Q8WWG1 115 aa7.57□□□□□ -1.2
SNX13-210ENST00000494402 SUCLG2Q96I99 432 aa7.57□□□□□ -1.2
SNX13-210ENST00000494402 KCNJ15Q99712 375 aa7.57□□□□□ -1.2
SNX13-210ENST00000494402 NUCKS1Q9H1E3 243 aaKnown RBP7.57□□□□□ -1.2
SNX13-210ENST00000494402 C2orf40Q9H1Z8 148 aa7.57□□□□□ -1.2
SNX13-210ENST00000494402 CCDC177Q9NQR7 707 aaPredicted RBP7.57□□□□□ -1.2
SNX13-210ENST00000494402 RAD18Q9NS91 495 aa7.57□□□□□ -1.2
SNX13-210ENST00000494402 GJB4Q9NTQ9 266 aa7.57□□□□□ -1.2
SNX13-210ENST00000494402 CLEC1BQ9P126 229 aa7.57□□□□□ -1.2
SNX13-210ENST00000494402 SLC6A14Q9UN76 642 aa7.57□□□□□ -1.2
SNX13-210ENST00000494402 AGTPBP1Q9UPW5 1226 aa7.57□□□□□ -1.2
SNX13-210ENST00000494402 MAN2B2Q9Y2E5 1009 aa7.57□□□□□ -1.2
SNX13-210ENST00000494402 ZFP37Q9Y6Q3 630 aaPredicted RBP7.57□□□□□ -1.2
SNX13-210ENST00000494402 H0Y3Z8 333 aa7.56□□□□□ -1.2
SNX13-210ENST00000494402 H0Y626 953 aa7.56□□□□□ -1.2
SNX13-210ENST00000494402 PODXLO00592 558 aa7.56□□□□□ -1.2
SNX13-210ENST00000494402 AP3D1O14617 1153 aa7.56□□□□□ -1.2
SNX13-210ENST00000494402 LPLP06858 475 aa7.56□□□□□ -1.2
SNX13-210ENST00000494402 ITGA5P08648 1049 aa7.56□□□□□ -1.2
SNX13-210ENST00000494402 KITP10721 976 aa7.56□□□□□ -1.2
SNX13-210ENST00000494402 ACADMP11310 421 aa7.56□□□□□ -1.2
SNX13-210ENST00000494402 HNF4AP41235 474 aa7.56□□□□□ -1.2
SNX13-210ENST00000494402 PHKA1P46020 1223 aa7.56□□□□□ -1.2
SNX13-210ENST00000494402 CCR5P51681 352 aa7.56□□□□□ -1.2
SNX13-210ENST00000494402 POLE2P56282 527 aa7.56□□□□□ -1.2
SNX13-210ENST00000494402 HSD17B7P56937 341 aa7.56□□□□□ -1.2
SNX13-210ENST00000494402 CHRNDQ07001 517 aa7.56□□□□□ -1.2
SNX13-210ENST00000494402 SNW1Q13573 536 aaKnown RBP7.56□□□□□ -1.2
SNX13-210ENST00000494402 SLC12A1Q13621 1099 aa7.56□□□□□ -1.2
SNX13-210ENST00000494402 ACVR2BQ13705 512 aa7.56□□□□□ -1.2
SNX13-210ENST00000494402 EPHA7Q15375 998 aa7.56□□□□□ -1.2
SNX13-210ENST00000494402 CCDC73Q6ZRK6 1079 aa7.56□□□□□ -1.2
SNX13-210ENST00000494402 EP400NLQ6ZTU2 488 aa7.56□□□□□ -1.2
SNX13-210ENST00000494402 TMTC3Q6ZXV5 915 aa7.56□□□□□ -1.2
SNX13-210ENST00000494402 MIGA2Q7L4E1 593 aa7.56□□□□□ -1.2
SNX13-210ENST00000494402 TMC6Q7Z403 805 aa7.56□□□□□ -1.2
SNX13-210ENST00000494402 PRPF39Q86UA1 669 aaKnown RBP7.56□□□□□ -1.2
SNX13-210ENST00000494402 CHD1LQ86WJ1 897 aa7.56□□□□□ -1.2
SNX13-210ENST00000494402 NME9Q86XW9 330 aa7.56□□□□□ -1.2
SNX13-210ENST00000494402 NAT8LQ8N9F0 302 aa7.56□□□□□ -1.2
SNX13-210ENST00000494402 TRIML1Q8N9V2 468 aa7.56□□□□□ -1.2
SNX13-210ENST00000494402 MFSD2AQ8NA29 543 aa7.56□□□□□ -1.2
SNX13-210ENST00000494402 GOT1L1Q8NHS2 421 aaPredicted RBP7.56□□□□□ -1.2
SNX13-210ENST00000494402 STYXQ8WUJ0 223 aa7.56□□□□□ -1.2
SNX13-210ENST00000494402 THAP4Q8WY91 577 aa7.56□□□□□ -1.2
SNX13-210ENST00000494402 JAKMIP2Q96AA8 810 aa7.56□□□□□ -1.2
SNX13-210ENST00000494402 SLC35A4Q96G79 324 aa7.56□□□□□ -1.2
SNX13-210ENST00000494402 MAML3Q96JK9 1138 aa7.56□□□□□ -1.2
SNX13-210ENST00000494402 LPIN3Q9BQK8 851 aa7.56□□□□□ -1.2
SNX13-210ENST00000494402 OR10A4Q9H209 315 aa7.56□□□□□ -1.2
SNX13-210ENST00000494402 SYNCQ9H7C4 482 aa7.56□□□□□ -1.2
SNX13-210ENST00000494402 STK17AQ9UEE5 414 aa7.56□□□□□ -1.2
SNX13-210ENST00000494402 DPP7Q9UHL4 492 aa7.56□□□□□ -1.2
SNX13-210ENST00000494402 TMEM5Q9Y2B1 443 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms