RNA–Protein interactions for RNA: ENST00000494274.5

RBM39-239, Transcript of RNA binding motif protein 39, humanhuman

TSL 3

Gene RBM39, Length 704 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-239ENST00000494274 SYT2Q8N9I0 419 aaPredicted RBP7.97□□□□□ -1.13
RBM39-239ENST00000494274 VN1R2Q8NFZ6 395 aa7.97□□□□□ -1.13
RBM39-239ENST00000494274 CLIC6Q96NY7 704 aa7.97□□□□□ -1.13
RBM39-239ENST00000494274 CDCA3Q99618 268 aaPredicted RBP7.97□□□□□ -1.13
RBM39-239ENST00000494274 TMEM175Q9BSA9 504 aa7.97□□□□□ -1.13
RBM39-239ENST00000494274 COLEC11Q9BWP8 271 aa7.97□□□□□ -1.13
RBM39-239ENST00000494274 PANK2Q9BZ23 570 aa7.97□□□□□ -1.13
RBM39-239ENST00000494274 CCDC113Q9H0I3 377 aa7.97□□□□□ -1.13
RBM39-239ENST00000494274 ZHX3Q9H4I2 956 aa7.97□□□□□ -1.13
RBM39-239ENST00000494274 CD320Q9NPF0 282 aa7.97□□□□□ -1.13
RBM39-239ENST00000494274 MTMR6Q9Y217 621 aa7.97□□□□□ -1.13
RBM39-239ENST00000494274 RBM19Q9Y4C8 960 aaKnown RBP7.97□□□□□ -1.13
RBM39-239ENST00000494274 TTC3P53804 2025 aa7.96□□□□□ -1.13
RBM39-239ENST00000494274 COL4A6Q14031 1691 aa7.96□□□□□ -1.13
RBM39-239ENST00000494274 SPDYE4A6NLX3 237 aa7.96□□□□□ -1.14
RBM39-239ENST00000494274 F8W810 466 aa7.96□□□□□ -1.14
RBM39-239ENST00000494274 CLASP2O75122 1294 aaKnown RBP7.96□□□□□ -1.14
RBM39-239ENST00000494274 TADA2AO75478 443 aa7.96□□□□□ -1.14
RBM39-239ENST00000494274 SRGAP2BP0DMP2 458 aa7.96□□□□□ -1.14
RBM39-239ENST00000494274 MYBP10242 640 aa7.96□□□□□ -1.14
RBM39-239ENST00000494274 CTSAP10619 480 aa7.96□□□□□ -1.14
RBM39-239ENST00000494274 HARSP12081 509 aaKnown RBP7.96□□□□□ -1.14
RBM39-239ENST00000494274 PLS3P13797 630 aa7.96□□□□□ -1.14
RBM39-239ENST00000494274 PLCG1P19174 1290 aa7.96□□□□□ -1.14
RBM39-239ENST00000494274 GUCY2CP25092 1073 aa7.96□□□□□ -1.14
RBM39-239ENST00000494274 KLRC2P26717 231 aa7.96□□□□□ -1.14
RBM39-239ENST00000494274 SLC12A3P55017 1021 aa7.96□□□□□ -1.14
RBM39-239ENST00000494274 OSTNP61366 133 aa7.96□□□□□ -1.14
RBM39-239ENST00000494274 STRN3Q13033 797 aa7.96□□□□□ -1.14
RBM39-239ENST00000494274 MAPK7Q13164 816 aa7.96□□□□□ -1.14
RBM39-239ENST00000494274 SMAD4Q13485 552 aaKnown RBP7.96□□□□□ -1.14
RBM39-239ENST00000494274 MCM6Q14566 821 aa7.96□□□□□ -1.14
RBM39-239ENST00000494274 SMAD2Q15796 467 aaKnown RBP7.96□□□□□ -1.14
RBM39-239ENST00000494274 FOXD4L6Q3SYB3 417 aaPredicted RBP7.96□□□□□ -1.14
RBM39-239ENST00000494274 TMEM119Q4V9L6 283 aa7.96□□□□□ -1.14
RBM39-239ENST00000494274 KIAA1841Q6NSI8 718 aa7.96□□□□□ -1.14
RBM39-239ENST00000494274 FOXD4L3Q6VB84 417 aaPredicted RBP7.96□□□□□ -1.14
RBM39-239ENST00000494274 USP49Q70CQ1 688 aa7.96□□□□□ -1.14
RBM39-239ENST00000494274 GPBP1Q86WP2 473 aa7.96□□□□□ -1.14
RBM39-239ENST00000494274 KCTD17Q8N5Z5 321 aa7.96□□□□□ -1.14
RBM39-239ENST00000494274 GSTCDQ8NEC7 633 aa7.96□□□□□ -1.14
RBM39-239ENST00000494274 SNX21Q969T3 373 aa7.96□□□□□ -1.14
RBM39-239ENST00000494274 EPSTI1Q96J88 318 aa7.96□□□□□ -1.14
RBM39-239ENST00000494274 MSLNLQ96KJ4 702 aa7.96□□□□□ -1.14
RBM39-239ENST00000494274 ACO2Q99798 780 aaKnown RBP7.96□□□□□ -1.14
RBM39-239ENST00000494274 NTPCRQ9BSD7 190 aaKnown RBP7.96□□□□□ -1.14
RBM39-239ENST00000494274 TIPINQ9BVW5 301 aa7.96□□□□□ -1.14
RBM39-239ENST00000494274 TARS2Q9BW92 718 aaKnown RBP7.96□□□□□ -1.14
RBM39-239ENST00000494274 MRPL4Q9BYD3 311 aaKnown RBP7.96□□□□□ -1.14
RBM39-239ENST00000494274 ZBP1Q9H171 429 aa7.96□□□□□ -1.14
RBM39-239ENST00000494274 ZSCAN16Q9H4T2 348 aaPredicted RBP7.96□□□□□ -1.14
RBM39-239ENST00000494274 EPHX3Q9H6B9 360 aa7.96□□□□□ -1.14
RBM39-239ENST00000494274 C17orf75Q9HAS0 396 aa7.96□□□□□ -1.14
RBM39-239ENST00000494274 LARSQ9P2J5 1176 aaKnown RBP7.96□□□□□ -1.14
RBM39-239ENST00000494274 TFIP11Q9UBB9 837 aaKnown RBP7.96□□□□□ -1.14
RBM39-239ENST00000494274 KCNG1Q9UIX4 513 aa7.96□□□□□ -1.14
RBM39-239ENST00000494274 TNFSF13BQ9Y275 285 aa7.96□□□□□ -1.14
RBM39-239ENST00000494274 USP15Q9Y4E8 981 aaPredicted RBP7.96□□□□□ -1.14
RBM39-239ENST00000494274 HCFC2Q9Y5Z7 792 aa7.96□□□□□ -1.14
RBM39-239ENST00000494274 EYSQ5T1H1 3165 aa7.96□□□□□ -1.14
RBM39-239ENST00000494274 PRUNE2Q8WUY3 3088 aa7.96□□□□□ -1.14
RBM39-239ENST00000494274 MICAL3Q7RTP6 2002 aa7.95□□□□□ -1.14
RBM39-239ENST00000494274 FSD2A1L4K1 749 aa7.95□□□□□ -1.14
RBM39-239ENST00000494274 CASTOR2A6NHX0 329 aa7.95□□□□□ -1.14
RBM39-239ENST00000494274 INPPL1O15357 1258 aa7.95□□□□□ -1.14
RBM39-239ENST00000494274 RECQL4O94761 1208 aa7.95□□□□□ -1.14
RBM39-239ENST00000494274 FAM13AO94988 1023 aa7.95□□□□□ -1.14
RBM39-239ENST00000494274 THP07101 528 aa7.95□□□□□ -1.14
RBM39-239ENST00000494274 EPCAMP16422 314 aa7.95□□□□□ -1.14
RBM39-239ENST00000494274 DDIT3P35638 169 aa7.95□□□□□ -1.14
RBM39-239ENST00000494274 MATR3P43243 847 aaKnown RBP eCLIP7.95□□□□□ -1.14
RBM39-239ENST00000494274 YARSP54577 528 aaKnown RBP7.95□□□□□ -1.14
RBM39-239ENST00000494274 DSC1Q08554 894 aa7.95□□□□□ -1.14
RBM39-239ENST00000494274 GRIK3Q13003 919 aa7.95□□□□□ -1.14
RBM39-239ENST00000494274 COASYQ13057 564 aa7.95□□□□□ -1.14
RBM39-239ENST00000494274 GIT2Q14161 759 aa7.95□□□□□ -1.14
RBM39-239ENST00000494274 PTPAQ15257 358 aa7.95□□□□□ -1.14
RBM39-239ENST00000494274 PTPN14Q15678 1187 aa7.95□□□□□ -1.14
RBM39-239ENST00000494274 DCAF4L1Q3SXM0 396 aa7.95□□□□□ -1.14
RBM39-239ENST00000494274 ZNF568Q3ZCX4 644 aa7.95□□□□□ -1.14
RBM39-239ENST00000494274 ARSHQ5FYA8 562 aa7.95□□□□□ -1.14
RBM39-239ENST00000494274 ANKRD54Q6NXT1 300 aa7.95□□□□□ -1.14
RBM39-239ENST00000494274 KANK3Q6NY19 840 aa7.95□□□□□ -1.14
RBM39-239ENST00000494274 TAS1R3Q7RTX0 852 aa7.95□□□□□ -1.14
RBM39-239ENST00000494274 APBB1IPQ7Z5R6 666 aaPredicted RBP7.95□□□□□ -1.14
RBM39-239ENST00000494274 ADHFE1Q8IWW8 467 aa7.95□□□□□ -1.14
RBM39-239ENST00000494274 MYCT1Q8N699 235 aa7.95□□□□□ -1.14
RBM39-239ENST00000494274 C12orf76Q8N812 135 aaPredicted RBP7.95□□□□□ -1.14
RBM39-239ENST00000494274 CEP120Q8N960 986 aa7.95□□□□□ -1.14
RBM39-239ENST00000494274 LRRC15Q8TF66 581 aa7.95□□□□□ -1.14
RBM39-239ENST00000494274 SPIRE2Q8WWL2 714 aa7.95□□□□□ -1.14
RBM39-239ENST00000494274 ZBTB45Q96K62 511 aaPredicted RBP7.95□□□□□ -1.14
RBM39-239ENST00000494274 RPGRIP1Q96KN7 1286 aa7.95□□□□□ -1.14
RBM39-239ENST00000494274 B3GALT6Q96L58 329 aa7.95□□□□□ -1.14
RBM39-239ENST00000494274 USP28Q96RU2 1077 aa7.95□□□□□ -1.14
RBM39-239ENST00000494274 REEP2Q9BRK0 252 aa7.95□□□□□ -1.14
RBM39-239ENST00000494274 PAAF1Q9BRP4 392 aa7.95□□□□□ -1.14
RBM39-239ENST00000494274 VN1R3Q9BXE9 311 aa7.95□□□□□ -1.14
RBM39-239ENST00000494274 EMILIN2Q9BXX0 1053 aa7.95□□□□□ -1.14
RBM39-239ENST00000494274 CXCL16Q9H2A7 254 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms