RNA–Protein interactions for RNA: ENST00000494268.1

MSL3-217, Transcript of MSL complex subunit 3, humanhuman

TSL 2

Gene MSL3, Length 1,124 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3-217ENST00000494268 ECHS1P30084 290 aa7.61□□□□□ -1.19
MSL3-217ENST00000494268 SELENOPP49908 381 aa7.61□□□□□ -1.19
MSL3-217ENST00000494268 KRTAP10-2P60368 255 aa7.61□□□□□ -1.19
MSL3-217ENST00000494268 KRT85P78386 507 aa7.61□□□□□ -1.19
MSL3-217ENST00000494268 HHEXQ03014 270 aa7.61□□□□□ -1.19
MSL3-217ENST00000494268 EFCAB2Q5VUJ9 269 aa7.61□□□□□ -1.19
MSL3-217ENST00000494268 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.61□□□□□ -1.19
MSL3-217ENST00000494268 OR7D4Q8NG98 312 aa7.61□□□□□ -1.19
MSL3-217ENST00000494268 STON2Q8WXE9 905 aa7.61□□□□□ -1.19
MSL3-217ENST00000494268 CEP95Q96GE4 821 aa7.61□□□□□ -1.19
MSL3-217ENST00000494268 BORCS6Q96GS4 357 aa7.61□□□□□ -1.19
MSL3-217ENST00000494268 C1QTNF3Q9BXJ4 246 aa7.61□□□□□ -1.19
MSL3-217ENST00000494268 SIK3Q9Y2K2 1263 aa7.61□□□□□ -1.19
MSL3-217ENST00000494268 PLSCR1O15162 318 aa7.6□□□□□ -1.19
MSL3-217ENST00000494268 CRHR1P34998 444 aa7.6□□□□□ -1.19
MSL3-217ENST00000494268 PTPN7P35236 360 aa7.6□□□□□ -1.19
MSL3-217ENST00000494268 SREBF1P36956 1147 aa7.6□□□□□ -1.19
MSL3-217ENST00000494268 SLC6A9P48067 706 aa7.6□□□□□ -1.19
MSL3-217ENST00000494268 NEK2P51955 445 aa7.6□□□□□ -1.19
MSL3-217ENST00000494268 MGAT2Q10469 447 aa7.6□□□□□ -1.19
MSL3-217ENST00000494268 PRKD1Q15139 912 aaPredicted RBP7.6□□□□□ -1.19
MSL3-217ENST00000494268 MFSD14BQ5SR56 506 aa7.6□□□□□ -1.19
MSL3-217ENST00000494268 ANKS6Q68DC2 871 aa7.6□□□□□ -1.19
MSL3-217ENST00000494268 FAM180AQ6UWF9 173 aa7.6□□□□□ -1.19
MSL3-217ENST00000494268 THEMISQ8N1K5 641 aaPredicted RBP7.6□□□□□ -1.19
MSL3-217ENST00000494268 PQLC1Q8N2U9 271 aa7.6□□□□□ -1.19
MSL3-217ENST00000494268 FAM89AQ96GI7 184 aa7.6□□□□□ -1.19
MSL3-217ENST00000494268 LDAHQ9H6V9 325 aa7.6□□□□□ -1.19
MSL3-217ENST00000494268 BCO1Q9HAY6 547 aa7.6□□□□□ -1.19
MSL3-217ENST00000494268 MUSKO15146 869 aa7.59□□□□□ -1.19
MSL3-217ENST00000494268 SNUPNO95149 360 aaKnown RBP7.59□□□□□ -1.19
MSL3-217ENST00000494268 ZRANB2O95218 330 aaKnown RBP eCLIP7.59□□□□□ -1.19
MSL3-217ENST00000494268 PER3P56645 1201 aa7.59□□□□□ -1.19
MSL3-217ENST00000494268 KIF23Q02241 960 aaPredicted RBP7.59□□□□□ -1.19
MSL3-217ENST00000494268 TTF1Q15361 905 aaPredicted RBP7.59□□□□□ -1.19
MSL3-217ENST00000494268 MFSD5Q6N075 450 aa7.59□□□□□ -1.19
MSL3-217ENST00000494268 Q6ZRM9 215 aa7.59□□□□□ -1.19
MSL3-217ENST00000494268 ZBTB46Q86UZ6 589 aa7.59□□□□□ -1.19
MSL3-217ENST00000494268 GSPT2Q8IYD1 628 aaKnown RBP7.59□□□□□ -1.19
MSL3-217ENST00000494268 TRMT2AQ8IZ69 625 aaKnown RBP7.59□□□□□ -1.19
MSL3-217ENST00000494268 MB21D1Q8N884 522 aa7.59□□□□□ -1.19
MSL3-217ENST00000494268 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.59□□□□□ -1.19
MSL3-217ENST00000494268 MIEF2Q96C03 454 aa7.59□□□□□ -1.19
MSL3-217ENST00000494268 CHMP4CQ96CF2 233 aa7.59□□□□□ -1.19
MSL3-217ENST00000494268 UHRF1Q96T88 793 aaPredicted RBP7.59□□□□□ -1.19
MSL3-217ENST00000494268 CPPED1Q9BRF8 314 aaPredicted RBP7.59□□□□□ -1.19
MSL3-217ENST00000494268 PDCD2LQ9BRP1 358 aa7.59□□□□□ -1.19
MSL3-217ENST00000494268 LSM14BQ9BX40 385 aaKnown RBP7.59□□□□□ -1.19
MSL3-217ENST00000494268 AASDHPPTQ9NRN7 309 aa7.59□□□□□ -1.19
MSL3-217ENST00000494268 SERPINB13Q9UIV8 391 aa7.59□□□□□ -1.19
MSL3-217ENST00000494268 LIMCH1Q9UPQ0 1083 aa7.59□□□□□ -1.19
MSL3-217ENST00000494268 MFAP3LO75121 409 aa7.58□□□□□ -1.2
MSL3-217ENST00000494268 GNAT2P19087 354 aa7.58□□□□□ -1.2
MSL3-217ENST00000494268 HK1P19367 917 aa7.58□□□□□ -1.2
MSL3-217ENST00000494268 EDNRBP24530 442 aa7.58□□□□□ -1.2
MSL3-217ENST00000494268 RECQLP46063 649 aaPredicted RBP7.58□□□□□ -1.2
MSL3-217ENST00000494268 SPDYAQ5MJ70 313 aa7.58□□□□□ -1.2
MSL3-217ENST00000494268 ANKRD35Q8N283 1001 aa7.58□□□□□ -1.2
MSL3-217ENST00000494268 MDGA1Q8NFP4 955 aa7.58□□□□□ -1.2
MSL3-217ENST00000494268 ST8SIA2Q92186 375 aa7.58□□□□□ -1.2
MSL3-217ENST00000494268 COA7Q96BR5 231 aa7.58□□□□□ -1.2
MSL3-217ENST00000494268 HOOK2Q96ED9 719 aa7.58□□□□□ -1.2
MSL3-217ENST00000494268 CEP89Q96ST8 783 aa7.58□□□□□ -1.2
MSL3-217ENST00000494268 LUC7L2Q9Y383 392 aaKnown RBP7.58□□□□□ -1.2
MSL3-217ENST00000494268 TSC22D4Q9Y3Q8 395 aa7.58□□□□□ -1.2
MSL3-217ENST00000494268 PCDHA13Q9Y5I0 950 aa7.58□□□□□ -1.2
MSL3-217ENST00000494268 WASP42768 502 aa7.57□□□□□ -1.2
MSL3-217ENST00000494268 SCNN1GP51170 649 aa7.57□□□□□ -1.2
MSL3-217ENST00000494268 RABGGTBP53611 331 aa7.57□□□□□ -1.2
MSL3-217ENST00000494268 CSRP2Q16527 193 aa7.57□□□□□ -1.2
MSL3-217ENST00000494268 C1QL3Q5VWW1 255 aa7.57□□□□□ -1.2
MSL3-217ENST00000494268 APBB1IPQ7Z5R6 666 aaPredicted RBP7.57□□□□□ -1.2
MSL3-217ENST00000494268 SLC35B2Q8TB61 432 aa7.57□□□□□ -1.2
MSL3-217ENST00000494268 CCHCR1Q8TD31 782 aa7.57□□□□□ -1.2
MSL3-217ENST00000494268 ATXN2LQ8WWM7 1075 aaKnown RBP7.57□□□□□ -1.2
MSL3-217ENST00000494268 EXTL1Q92935 676 aa7.57□□□□□ -1.2
MSL3-217ENST00000494268 PGBD4Q96DM1 585 aa7.57□□□□□ -1.2
MSL3-217ENST00000494268 CPEB1Q9BZB8 566 aaKnown RBP7.57□□□□□ -1.2
MSL3-217ENST00000494268 KCNH6Q9H252 994 aa7.57□□□□□ -1.2
MSL3-217ENST00000494268 TESMINQ9Y4I5 508 aa7.57□□□□□ -1.2
MSL3-217ENST00000494268 IPPQ9Y573 584 aa7.57□□□□□ -1.2
MSL3-217ENST00000494268 ATRNL1Q5VV63 1379 aa7.57□□□□□ -1.2
MSL3-217ENST00000494268 HTRA2O43464 458 aaPredicted RBP7.56□□□□□ -1.2
MSL3-217ENST00000494268 ADRB1P08588 477 aa7.56□□□□□ -1.2
MSL3-217ENST00000494268 PTTG1IPP53801 180 aa7.56□□□□□ -1.2
MSL3-217ENST00000494268 MCL1Q07820 350 aa7.56□□□□□ -1.2
MSL3-217ENST00000494268 IL10RAQ13651 578 aa7.56□□□□□ -1.2
MSL3-217ENST00000494268 UAP1L1Q3KQV9 507 aa7.56□□□□□ -1.2
MSL3-217ENST00000494268 PLEKHG6Q3KR16 790 aa7.56□□□□□ -1.2
MSL3-217ENST00000494268 C3orf36Q3SXR2 165 aa7.56□□□□□ -1.2
MSL3-217ENST00000494268 FAM47AQ5JRC9 791 aa7.56□□□□□ -1.2
MSL3-217ENST00000494268 PDZD4Q76G19 769 aaPredicted RBP7.56□□□□□ -1.2
MSL3-217ENST00000494268 ZNF572Q7Z3I7 529 aaPredicted RBP7.56□□□□□ -1.2
MSL3-217ENST00000494268 FAM83AQ86UY5 434 aa7.56□□□□□ -1.2
MSL3-217ENST00000494268 RHOT1Q8IXI2 618 aa7.56□□□□□ -1.2
MSL3-217ENST00000494268 RAVER1Q8IY67 606 aaKnown RBP7.56□□□□□ -1.2
MSL3-217ENST00000494268 CMTR2Q8IYT2 770 aaKnown RBP7.56□□□□□ -1.2
MSL3-217ENST00000494268 ANKRD13AQ8IZ07 590 aa7.56□□□□□ -1.2
MSL3-217ENST00000494268 CPA6Q8N4T0 437 aa7.56□□□□□ -1.2
MSL3-217ENST00000494268 RAB24Q969Q5 203 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms