RNA–Protein interactions for RNA: ENST00000494255.5

TRA2A-209, Transcript of transformer 2 alpha homolog, humanhuman

TSL 1 (best)

Gene TRA2A, Length 1,653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-209ENST00000494255 NOLC1Q14978 699 aaKnown RBP eCLIP13.66□□□□□ -0.22
TRA2A-209ENST00000494255 NOMO2Q5JPE7 1267 aa13.66□□□□□ -0.22
TRA2A-209ENST00000494255 L1TD1Q5T7N2 865 aaKnown RBP13.66□□□□□ -0.22
TRA2A-209ENST00000494255 AGMOQ6ZNB7 445 aa13.66□□□□□ -0.22
TRA2A-209ENST00000494255 SYCP3Q8IZU3 236 aa13.66□□□□□ -0.22
TRA2A-209ENST00000494255 LRRC43Q8N309 656 aa13.66□□□□□ -0.22
TRA2A-209ENST00000494255 DEFB123Q8N688 67 aa13.66□□□□□ -0.22
TRA2A-209ENST00000494255 ENGASEQ8NFI3 743 aa13.66□□□□□ -0.22
TRA2A-209ENST00000494255 TIGD1Q96MW7 591 aa13.66□□□□□ -0.22
TRA2A-209ENST00000494255 SAMD11Q96NU1 681 aa13.66□□□□□ -0.22
TRA2A-209ENST00000494255 SEMA6BQ9H3T3 888 aa13.66□□□□□ -0.22
TRA2A-209ENST00000494255 GIT1Q9Y2X7 761 aa13.66□□□□□ -0.22
TRA2A-209ENST00000494255 MEIS3P2A8K0S8 358 aa13.66□□□□□ -0.22
TRA2A-209ENST00000494255 GOLGA6L22H0YM25 854 aa13.66□□□□□ -0.22
TRA2A-209ENST00000494255 CLDN3O15551 220 aa13.66□□□□□ -0.22
TRA2A-209ENST00000494255 NR1I2O75469 434 aa13.66□□□□□ -0.22
TRA2A-209ENST00000494255 OFD1O75665 1012 aa13.66□□□□□ -0.22
TRA2A-209ENST00000494255 PPP1R37O75864 691 aa13.66□□□□□ -0.22
TRA2A-209ENST00000494255 ARHGEF15O94989 841 aa13.66□□□□□ -0.22
TRA2A-209ENST00000494255 MYBP10242 640 aa13.66□□□□□ -0.22
TRA2A-209ENST00000494255 HARSP12081 509 aaKnown RBP13.66□□□□□ -0.22
TRA2A-209ENST00000494255 PROZP22891 400 aa13.66□□□□□ -0.22
TRA2A-209ENST00000494255 ERVK-21P61565 698 aa13.66□□□□□ -0.22
TRA2A-209ENST00000494255 RNASELQ05823 741 aaKnown RBP13.66□□□□□ -0.22
TRA2A-209ENST00000494255 SNW1Q13573 536 aaKnown RBP13.66□□□□□ -0.22
TRA2A-209ENST00000494255 POSTNQ15063 836 aa13.66□□□□□ -0.22
TRA2A-209ENST00000494255 FAM161BQ96MY7 647 aa13.66□□□□□ -0.22
TRA2A-209ENST00000494255 STRA6Q9BX79 667 aa13.66□□□□□ -0.22
TRA2A-209ENST00000494255 CDT1Q9H211 546 aa13.66□□□□□ -0.22
TRA2A-209ENST00000494255 TTYH1Q9H313 450 aaPredicted RBP13.66□□□□□ -0.22
TRA2A-209ENST00000494255 CERS4Q9HA82 394 aa13.66□□□□□ -0.22
TRA2A-209ENST00000494255 PTPRHQ9HD43 1115 aa13.66□□□□□ -0.22
TRA2A-209ENST00000494255 KANSL3Q9P2N6 904 aa13.66□□□□□ -0.22
TRA2A-209ENST00000494255 MRPL42Q9Y6G3 142 aaKnown RBP13.66□□□□□ -0.22
TRA2A-209ENST00000494255 NLRC5Q86WI3 1866 aa13.65□□□□□ -0.22
TRA2A-209ENST00000494255 RANBP2P49792 3224 aaKnown RBP13.65□□□□□ -0.22
TRA2A-209ENST00000494255 ZMYM2Q9UBW7 1377 aa13.65□□□□□ -0.22
TRA2A-209ENST00000494255 RALGAPA2Q2PPJ7 1873 aa13.65□□□□□ -0.22
TRA2A-209ENST00000494255 EIF3DO15371 548 aaKnown RBP eCLIP13.65□□□□□ -0.22
TRA2A-209ENST00000494255 RPN1P04843 607 aaKnown RBP13.65□□□□□ -0.22
TRA2A-209ENST00000494255 PRR29P0C7W0 189 aa13.65□□□□□ -0.22
TRA2A-209ENST00000494255 AKAP5P24588 427 aa13.65□□□□□ -0.22
TRA2A-209ENST00000494255 CTNNB1P35222 781 aa13.65□□□□□ -0.22
TRA2A-209ENST00000494255 CASP5P51878 434 aa13.65□□□□□ -0.22
TRA2A-209ENST00000494255 DPYDQ12882 1025 aa13.65□□□□□ -0.22
TRA2A-209ENST00000494255 PSMD2Q13200 908 aa13.65□□□□□ -0.22
TRA2A-209ENST00000494255 KMT5BQ4FZB7 885 aa13.65□□□□□ -0.22
TRA2A-209ENST00000494255 SLFN12LQ6IEE8 588 aa13.65□□□□□ -0.22
TRA2A-209ENST00000494255 Q7L0L9 218 aa13.65□□□□□ -0.22
TRA2A-209ENST00000494255 TMEM192Q8IY95 271 aa13.65□□□□□ -0.22
TRA2A-209ENST00000494255 FBXO22Q8NEZ5 403 aa13.65□□□□□ -0.22
TRA2A-209ENST00000494255 ARNTL2Q8WYA1 636 aa13.65□□□□□ -0.22
TRA2A-209ENST00000494255 HPS3Q969F9 1004 aa13.65□□□□□ -0.22
TRA2A-209ENST00000494255 ZBTB45Q96K62 511 aaPredicted RBP13.65□□□□□ -0.22
TRA2A-209ENST00000494255 RPS6KC1Q96S38 1066 aa13.65□□□□□ -0.22
TRA2A-209ENST00000494255 CCDC94Q9BW85 323 aaPredicted RBP13.65□□□□□ -0.22
TRA2A-209ENST00000494255 RNF39Q9H2S5 420 aa13.65□□□□□ -0.22
TRA2A-209ENST00000494255 TMEM206Q9H813 350 aa13.65□□□□□ -0.22
TRA2A-209ENST00000494255 AAASQ9NRG9 546 aa13.65□□□□□ -0.22
TRA2A-209ENST00000494255 TYW1Q9NV66 732 aaKnown RBP13.65□□□□□ -0.22
TRA2A-209ENST00000494255 SNTG2Q9NY99 539 aa13.65□□□□□ -0.22
TRA2A-209ENST00000494255 MTUS1Q9ULD2 1270 aa13.65□□□□□ -0.22
TRA2A-209ENST00000494255 GDAQ9Y2T3 454 aa13.65□□□□□ -0.22
TRA2A-209ENST00000494255 ARL5CA6NH57 179 aa13.64□□□□□ -0.23
TRA2A-209ENST00000494255 KLRC4O43908 158 aa13.64□□□□□ -0.23
TRA2A-209ENST00000494255 RECQL4O94761 1208 aa13.64□□□□□ -0.23
TRA2A-209ENST00000494255 PRPF6O94906 941 aaKnown RBP13.64□□□□□ -0.23
TRA2A-209ENST00000494255 LAG3P18627 525 aa13.64□□□□□ -0.23
TRA2A-209ENST00000494255 MLH1P40692 756 aa13.64□□□□□ -0.23
TRA2A-209ENST00000494255 GRM5P41594 1212 aa13.64□□□□□ -0.23
TRA2A-209ENST00000494255 YARSP54577 528 aaKnown RBP13.64□□□□□ -0.23
TRA2A-209ENST00000494255 MCL1Q07820 350 aa13.64□□□□□ -0.23
TRA2A-209ENST00000494255 EHHADHQ08426 723 aa13.64□□□□□ -0.23
TRA2A-209ENST00000494255 KYAT1Q16773 422 aa13.64□□□□□ -0.23
TRA2A-209ENST00000494255 THNSL1Q8IYQ7 743 aa13.64□□□□□ -0.23
TRA2A-209ENST00000494255 CLP1Q92989 425 aaKnown RBP13.64□□□□□ -0.23
TRA2A-209ENST00000494255 GAD1Q99259 594 aa13.64□□□□□ -0.23
TRA2A-209ENST00000494255 C17orf80Q9BSJ5 609 aa13.64□□□□□ -0.23
TRA2A-209ENST00000494255 FGFBP2Q9BYJ0 223 aa13.64□□□□□ -0.23
TRA2A-209ENST00000494255 SLC39A2Q9NP94 309 aa13.64□□□□□ -0.23
TRA2A-209ENST00000494255 TOPORSQ9NS56 1045 aaPredicted RBP13.64□□□□□ -0.23
TRA2A-209ENST00000494255 ABLIM1O14639 778 aa13.63□□□□□ -0.23
TRA2A-209ENST00000494255 SMC2O95347 1197 aa13.63□□□□□ -0.23
TRA2A-209ENST00000494255 BMPR1AP36894 532 aa13.63□□□□□ -0.23
TRA2A-209ENST00000494255 OSTNP61366 133 aa13.63□□□□□ -0.23
TRA2A-209ENST00000494255 PNOCQ13519 176 aa13.63□□□□□ -0.23
TRA2A-209ENST00000494255 EPC2Q52LR7 807 aa13.63□□□□□ -0.23
TRA2A-209ENST00000494255 FAM193BQ96PV7 902 aaPredicted RBP13.63□□□□□ -0.23
TRA2A-209ENST00000494255 MSTO1Q9BUK6 570 aa13.63□□□□□ -0.23
TRA2A-209ENST00000494255 TBC1D13Q9NVG8 400 aa13.63□□□□□ -0.23
TRA2A-209ENST00000494255 KLK14Q9P0G3 267 aa13.63□□□□□ -0.23
TRA2A-209ENST00000494255 PCDHB12Q9Y5F1 795 aa13.63□□□□□ -0.23
TRA2A-209ENST00000494255 UBE4BO95155 1302 aa13.63□□□□□ -0.23
TRA2A-209ENST00000494255 KIAA1671Q9BY89 1806 aa13.63□□□□□ -0.23
TRA2A-209ENST00000494255 A0A0B4J269 797 aa13.63□□□□□ -0.23
TRA2A-209ENST00000494255 CARNS1A5YM72 827 aa13.63□□□□□ -0.23
TRA2A-209ENST00000494255 INPPL1O15357 1258 aa13.63□□□□□ -0.23
TRA2A-209ENST00000494255 RB1P06400 928 aa13.63□□□□□ -0.23
TRA2A-209ENST00000494255 KCNA1Q09470 495 aa13.63□□□□□ -0.23
TRA2A-209ENST00000494255 GRIN2CQ14957 1233 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 93.6 ms