RNA–Protein interactions for RNA: ENST00000494185.1

LMNB1-207, Transcript of lamin B1, humanhuman

TSL 2

Gene LMNB1, Length 579 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-207ENST00000494185 ZFP28Q8NHY6 868 aa3.12□□□□□ -1.91
LMNB1-207ENST00000494185 TSPEARQ8WU66 669 aa3.12□□□□□ -1.91
LMNB1-207ENST00000494185 SNX33Q8WV41 574 aa3.12□□□□□ -1.91
LMNB1-207ENST00000494185 ST8SIA2Q92186 375 aa3.12□□□□□ -1.91
LMNB1-207ENST00000494185 CHMP4CQ96CF2 233 aa3.12□□□□□ -1.91
LMNB1-207ENST00000494185 GNRHR2Q96P88 292 aa3.12□□□□□ -1.91
LMNB1-207ENST00000494185 RBM15Q96T37 977 aaKnown RBP eCLIP3.12□□□□□ -1.91
LMNB1-207ENST00000494185 SLC13A1Q9BZW2 595 aa3.12□□□□□ -1.91
LMNB1-207ENST00000494185 CSRNP2Q9H175 543 aa3.12□□□□□ -1.91
LMNB1-207ENST00000494185 TNKSO95271 1327 aa3.12□□□□□ -1.91
LMNB1-207ENST00000494185 A0A1W2PR48 441 aa3.11□□□□□ -1.91
LMNB1-207ENST00000494185 E2F8A0AVK6 867 aa3.11□□□□□ -1.91
LMNB1-207ENST00000494185 C2orf78A6NCI8 922 aa3.11□□□□□ -1.91
LMNB1-207ENST00000494185 FZD9O00144 591 aa3.11□□□□□ -1.91
LMNB1-207ENST00000494185 AKR1B10O60218 316 aa3.11□□□□□ -1.91
LMNB1-207ENST00000494185 SNUPNO95149 360 aaKnown RBP3.11□□□□□ -1.91
LMNB1-207ENST00000494185 PARNO95453 639 aaKnown RBP3.11□□□□□ -1.91
LMNB1-207ENST00000494185 PEX11BO96011 259 aa3.11□□□□□ -1.91
LMNB1-207ENST00000494185 SNRPA1P09661 255 aaKnown RBP3.11□□□□□ -1.91
LMNB1-207ENST00000494185 ZNF20P17024 532 aa3.11□□□□□ -1.91
LMNB1-207ENST00000494185 PTGS2P35354 604 aa3.11□□□□□ -1.91
LMNB1-207ENST00000494185 CREMQ03060 361 aa3.11□□□□□ -1.91
LMNB1-207ENST00000494185 TTF1Q15361 905 aaPredicted RBP3.11□□□□□ -1.91
LMNB1-207ENST00000494185 PCBP2Q15366 365 aaKnown RBP eCLIP3.11□□□□□ -1.91
LMNB1-207ENST00000494185 ADRM1Q16186 407 aa3.11□□□□□ -1.91
LMNB1-207ENST00000494185 NRN1LQ496H8 165 aa3.11□□□□□ -1.91
LMNB1-207ENST00000494185 RRP12Q5JTH9 1297 aaKnown RBP3.11□□□□□ -1.91
LMNB1-207ENST00000494185 ODR4Q5SWX8 454 aa3.11□□□□□ -1.91
LMNB1-207ENST00000494185 THEMIS2Q5TEJ8 643 aa3.11□□□□□ -1.91
LMNB1-207ENST00000494185 EFCAB2Q5VUJ9 269 aa3.11□□□□□ -1.91
LMNB1-207ENST00000494185 ARMC6Q6NXE6 501 aa3.11□□□□□ -1.91
LMNB1-207ENST00000494185 DOK3Q7L591 496 aa3.11□□□□□ -1.91
LMNB1-207ENST00000494185 PALM2Q8IXS6 379 aa3.11□□□□□ -1.91
LMNB1-207ENST00000494185 MIER2Q8N344 545 aa3.11□□□□□ -1.91
LMNB1-207ENST00000494185 PIK3C3Q8NEB9 887 aa3.11□□□□□ -1.91
LMNB1-207ENST00000494185 GPR156Q8NFN8 814 aa3.11□□□□□ -1.91
LMNB1-207ENST00000494185 Q8TCH9 128 aa3.11□□□□□ -1.91
LMNB1-207ENST00000494185 JADE3Q92613 823 aa3.11□□□□□ -1.91
LMNB1-207ENST00000494185 HDAC10Q969S8 669 aa3.11□□□□□ -1.91
LMNB1-207ENST00000494185 TMEM176AQ96HP8 235 aa3.11□□□□□ -1.91
LMNB1-207ENST00000494185 ZNF512Q96ME7 567 aaPredicted RBP3.11□□□□□ -1.91
LMNB1-207ENST00000494185 DCLRE1CQ96SD1 692 aaKnown RBP3.11□□□□□ -1.91
LMNB1-207ENST00000494185 C7orf25Q9BPX7 421 aa3.11□□□□□ -1.91
LMNB1-207ENST00000494185 CPPED1Q9BRF8 314 aaPredicted RBP3.11□□□□□ -1.91
LMNB1-207ENST00000494185 GPR87Q9BY21 358 aa3.11□□□□□ -1.91
LMNB1-207ENST00000494185 SENP6Q9GZR1 1112 aaPredicted RBP3.11□□□□□ -1.91
LMNB1-207ENST00000494185 BCO1Q9HAY6 547 aa3.11□□□□□ -1.91
LMNB1-207ENST00000494185 TLR9Q9NR96 1032 aa3.11□□□□□ -1.91
LMNB1-207ENST00000494185 ZNF277Q9NRM2 450 aaPredicted RBP3.11□□□□□ -1.91
LMNB1-207ENST00000494185 AASDHPPTQ9NRN7 309 aa3.11□□□□□ -1.91
LMNB1-207ENST00000494185 CHPF2Q9P2E5 772 aa3.11□□□□□ -1.91
LMNB1-207ENST00000494185 ST6GALNAC2Q9UJ37 374 aa3.11□□□□□ -1.91
LMNB1-207ENST00000494185 TRIM24O15164 1050 aa3.1□□□□□ -1.91
LMNB1-207ENST00000494185 PJA2O43164 708 aa3.1□□□□□ -1.91
LMNB1-207ENST00000494185 PCDHGA12O60330 932 aa3.1□□□□□ -1.91
LMNB1-207ENST00000494185 NDUFS2O75306 463 aa3.1□□□□□ -1.91
LMNB1-207ENST00000494185 ITGA10O75578 1167 aa3.1□□□□□ -1.91
LMNB1-207ENST00000494185 CTSSP25774 331 aa3.1□□□□□ -1.91
LMNB1-207ENST00000494185 MCM7P33993 719 aa3.1□□□□□ -1.91
LMNB1-207ENST00000494185 RECQLP46063 649 aaPredicted RBP3.1□□□□□ -1.91
LMNB1-207ENST00000494185 FLT3LGP49771 235 aa3.1□□□□□ -1.91
LMNB1-207ENST00000494185 EPHB1P54762 984 aa3.1□□□□□ -1.91
LMNB1-207ENST00000494185 APBA1Q02410 837 aa3.1□□□□□ -1.91
LMNB1-207ENST00000494185 SP140Q13342 867 aa3.1□□□□□ -1.91
LMNB1-207ENST00000494185 ICAM4Q14773 271 aa3.1□□□□□ -1.91
LMNB1-207ENST00000494185 MST1LQ2TV78 715 aa3.1□□□□□ -1.91
LMNB1-207ENST00000494185 EFCAB12Q6NXP0 572 aa3.1□□□□□ -1.91
LMNB1-207ENST00000494185 DRC7Q8IY82 874 aa3.1□□□□□ -1.91
LMNB1-207ENST00000494185 MDGA1Q8NFP4 955 aa3.1□□□□□ -1.91
LMNB1-207ENST00000494185 OR7D4Q8NG98 312 aa3.1□□□□□ -1.91
LMNB1-207ENST00000494185 ATXN2LQ8WWM7 1075 aaKnown RBP3.1□□□□□ -1.91
LMNB1-207ENST00000494185 CASKIN2Q8WXE0 1202 aa3.1□□□□□ -1.91
LMNB1-207ENST00000494185 CFHR4Q92496 578 aa3.1□□□□□ -1.91
LMNB1-207ENST00000494185 TEKT5Q96M29 485 aa3.1□□□□□ -1.91
LMNB1-207ENST00000494185 SLC2A13Q96QE2 648 aa3.1□□□□□ -1.91
LMNB1-207ENST00000494185 GNL3LQ9NVN8 582 aaKnown RBP3.1□□□□□ -1.91
LMNB1-207ENST00000494185 GPRC5DQ9NZD1 345 aa3.1□□□□□ -1.91
LMNB1-207ENST00000494185 HECAQ9UBI9 543 aaPredicted RBP3.1□□□□□ -1.91
LMNB1-207ENST00000494185 LUC7L2Q9Y383 392 aaKnown RBP3.1□□□□□ -1.91
LMNB1-207ENST00000494185 PCDHGA9Q9Y5G4 932 aaKnown RBP3.1□□□□□ -1.91
LMNB1-207ENST00000494185 PCDHGA8Q9Y5G5 932 aa3.1□□□□□ -1.91
LMNB1-207ENST00000494185 PCDHGA7Q9Y5G6 932 aa3.1□□□□□ -1.91
LMNB1-207ENST00000494185 PCDHGA6Q9Y5G7 932 aa3.1□□□□□ -1.91
LMNB1-207ENST00000494185 PCDHGA3Q9Y5H0 932 aa3.1□□□□□ -1.91
LMNB1-207ENST00000494185 PCDHGA2Q9Y5H1 932 aa3.1□□□□□ -1.91
LMNB1-207ENST00000494185 MATN2O00339 956 aa3.09□□□□□ -1.91
LMNB1-207ENST00000494185 FOXS1O43638 330 aa3.09□□□□□ -1.91
LMNB1-207ENST00000494185 TMEM127O75204 238 aa3.09□□□□□ -1.91
LMNB1-207ENST00000494185 ARIH2O95376 493 aa3.09□□□□□ -1.91
LMNB1-207ENST00000494185 C5AR1P21730 350 aa3.09□□□□□ -1.91
LMNB1-207ENST00000494185 PTPN7P35236 360 aa3.09□□□□□ -1.91
LMNB1-207ENST00000494185 GDF5P43026 501 aa3.09□□□□□ -1.91
LMNB1-207ENST00000494185 MCL1Q07820 350 aa3.09□□□□□ -1.91
LMNB1-207ENST00000494185 MGAT2Q10469 447 aa3.09□□□□□ -1.91
LMNB1-207ENST00000494185 PIN1Q13526 163 aaPredicted RBP3.09□□□□□ -1.91
LMNB1-207ENST00000494185 ACAP1Q15027 740 aa3.09□□□□□ -1.91
LMNB1-207ENST00000494185 UBE3CQ15386 1083 aa3.09□□□□□ -1.91
LMNB1-207ENST00000494185 SPDYE7PQ495Y7 208 aa3.09□□□□□ -1.91
LMNB1-207ENST00000494185 TMEM240Q5SV17 173 aa3.09□□□□□ -1.91
LMNB1-207ENST00000494185 MAMDC4Q6UXC1 1216 aa3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms