RNA–Protein interactions for RNA: ENST00000494047.5

RFC4-214, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 1,393 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-214ENST00000494047 BPIFB4P59827 614 aa12.36□□□□□ -0.43
RFC4-214ENST00000494047 DHX9Q08211 1270 aaKnown RBP12.36□□□□□ -0.43
RFC4-214ENST00000494047 CALCOCO2Q13137 446 aa12.36□□□□□ -0.43
RFC4-214ENST00000494047 ENOX2Q16206 610 aaKnown RBP12.36□□□□□ -0.43
RFC4-214ENST00000494047 TRMT10CQ7L0Y3 403 aaKnown RBP12.36□□□□□ -0.43
RFC4-214ENST00000494047 MIER3Q7Z3K6 550 aa12.36□□□□□ -0.43
RFC4-214ENST00000494047 SIAH1Q8IUQ4 282 aa12.36□□□□□ -0.43
RFC4-214ENST00000494047 GLYCTKQ8IVS8 523 aa12.36□□□□□ -0.43
RFC4-214ENST00000494047 GBP7Q8N8V2 638 aaPredicted RBP12.36□□□□□ -0.43
RFC4-214ENST00000494047 LNX1Q8TBB1 728 aaPredicted RBP12.36□□□□□ -0.43
RFC4-214ENST00000494047 TLCD1Q96CP7 247 aa12.36□□□□□ -0.43
RFC4-214ENST00000494047 FIZ1Q96SL8 496 aa12.36□□□□□ -0.43
RFC4-214ENST00000494047 ZSWIM1Q9BR11 485 aa12.36□□□□□ -0.43
RFC4-214ENST00000494047 CCDC134Q9H6E4 229 aa12.36□□□□□ -0.43
RFC4-214ENST00000494047 KIAA1586Q9HCI6 787 aa12.36□□□□□ -0.43
RFC4-214ENST00000494047 ANKEF1Q9NU02 776 aa12.36□□□□□ -0.43
RFC4-214ENST00000494047 CTTNBP2NLQ9P2B4 639 aa12.36□□□□□ -0.43
RFC4-214ENST00000494047 AMACRQ9UHK6 382 aa12.36□□□□□ -0.43
RFC4-214ENST00000494047 PACSIN2Q9UNF0 486 aaPredicted RBP12.36□□□□□ -0.43
RFC4-214ENST00000494047 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.36□□□□□ -0.43
RFC4-214ENST00000494047 PCDHAC2Q9Y5I4 1007 aa12.36□□□□□ -0.43
RFC4-214ENST00000494047 RPTORQ8N122 1335 aa12.36□□□□□ -0.43
RFC4-214ENST00000494047 FAM155AB1AL88 458 aaPredicted RBP12.35□□□□□ -0.43
RFC4-214ENST00000494047 OPLAHO14841 1288 aa12.35□□□□□ -0.43
RFC4-214ENST00000494047 CLIC2O15247 247 aa12.35□□□□□ -0.43
RFC4-214ENST00000494047 MAFGO15525 162 aa12.35□□□□□ -0.43
RFC4-214ENST00000494047 ICAM1P05362 532 aa12.35□□□□□ -0.43
RFC4-214ENST00000494047 ASNSP08243 561 aa12.35□□□□□ -0.43
RFC4-214ENST00000494047 GSTA1P08263 222 aa12.35□□□□□ -0.43
RFC4-214ENST00000494047 ERCC3P19447 782 aa12.35□□□□□ -0.43
RFC4-214ENST00000494047 CETN2P41208 172 aa12.35□□□□□ -0.43
RFC4-214ENST00000494047 PDE6CP51160 858 aa12.35□□□□□ -0.43
RFC4-214ENST00000494047 PMS2P54278 862 aa12.35□□□□□ -0.43
RFC4-214ENST00000494047 GTF2BQ00403 316 aa12.35□□□□□ -0.43
RFC4-214ENST00000494047 KRT76Q01546 638 aa12.35□□□□□ -0.43
RFC4-214ENST00000494047 TCP10Q12799 353 aa12.35□□□□□ -0.43
RFC4-214ENST00000494047 CTTNQ14247 550 aaKnown RBP12.35□□□□□ -0.43
RFC4-214ENST00000494047 ITIH4Q14624 930 aa12.35□□□□□ -0.43
RFC4-214ENST00000494047 EPC2Q52LR7 807 aa12.35□□□□□ -0.43
RFC4-214ENST00000494047 LDLRAD1Q5T700 205 aa12.35□□□□□ -0.43
RFC4-214ENST00000494047 PRAMEF18Q5VWM3 479 aa12.35□□□□□ -0.43
RFC4-214ENST00000494047 KCTD16Q68DU8 428 aa12.35□□□□□ -0.43
RFC4-214ENST00000494047 FOXR1Q6PIV2 292 aa12.35□□□□□ -0.43
RFC4-214ENST00000494047 C4orf19Q8IY42 314 aa12.35□□□□□ -0.43
RFC4-214ENST00000494047 CCHCR1Q8TD31 782 aa12.35□□□□□ -0.43
RFC4-214ENST00000494047 TMC2Q8TDI7 906 aa12.35□□□□□ -0.43
RFC4-214ENST00000494047 KCNN1Q92952 543 aa12.35□□□□□ -0.43
RFC4-214ENST00000494047 CYFIP2Q96F07 1278 aa12.35□□□□□ -0.43
RFC4-214ENST00000494047 TRERF1Q96PN7 1200 aa12.35□□□□□ -0.43
RFC4-214ENST00000494047 TXLNGYQ9BZA5 131 aa12.35□□□□□ -0.43
RFC4-214ENST00000494047 PPCSQ9HAB8 311 aa12.35□□□□□ -0.43
RFC4-214ENST00000494047 ZBTB21Q9ULJ3 1066 aa12.35□□□□□ -0.43
RFC4-214ENST00000494047 SCAF8Q9UPN6 1271 aaKnown RBP12.35□□□□□ -0.43
RFC4-214ENST00000494047 RSPH10B2B2RC85 870 aa12.34□□□□□ -0.43
RFC4-214ENST00000494047 EML1O00423 815 aa12.34□□□□□ -0.43
RFC4-214ENST00000494047 ASAP2O43150 1006 aa12.34□□□□□ -0.43
RFC4-214ENST00000494047 TTI1O43156 1089 aa12.34□□□□□ -0.43
RFC4-214ENST00000494047 DAPK3O43293 454 aa12.34□□□□□ -0.43
RFC4-214ENST00000494047 AOC2O75106 756 aa12.34□□□□□ -0.43
RFC4-214ENST00000494047 HIP1RO75146 1068 aa12.34□□□□□ -0.43
RFC4-214ENST00000494047 RSPH10BP0C881 870 aa12.34□□□□□ -0.43
RFC4-214ENST00000494047 RARGP13631 454 aa12.34□□□□□ -0.43
RFC4-214ENST00000494047 VCAM1P19320 739 aa12.34□□□□□ -0.43
RFC4-214ENST00000494047 NMT1P30419 496 aaKnown RBP12.34□□□□□ -0.43
RFC4-214ENST00000494047 QARSP47897 775 aaKnown RBP12.34□□□□□ -0.43
RFC4-214ENST00000494047 ATP1A2P50993 1020 aa12.34□□□□□ -0.43
RFC4-214ENST00000494047 CYP2J2P51589 502 aa12.34□□□□□ -0.43
RFC4-214ENST00000494047 NCKAP1LP55160 1127 aa12.34□□□□□ -0.43
RFC4-214ENST00000494047 RTP1P59025 263 aa12.34□□□□□ -0.43
RFC4-214ENST00000494047 MKRN3Q13064 507 aaKnown RBP12.34□□□□□ -0.43
RFC4-214ENST00000494047 PCNX4Q63HM2 1172 aa12.34□□□□□ -0.43
RFC4-214ENST00000494047 KRT39Q6A163 491 aa12.34□□□□□ -0.43
RFC4-214ENST00000494047 MFSD5Q6N075 450 aa12.34□□□□□ -0.43
RFC4-214ENST00000494047 PADI6Q6TGC4 694 aa12.34□□□□□ -0.43
RFC4-214ENST00000494047 SH3BP5LQ7L8J4 393 aa12.34□□□□□ -0.43
RFC4-214ENST00000494047 JAMLQ86YT9 394 aa12.34□□□□□ -0.43
RFC4-214ENST00000494047 RASAL3Q86YV0 1011 aa12.34□□□□□ -0.43
RFC4-214ENST00000494047 WDR18Q9BV38 432 aa12.34□□□□□ -0.43
RFC4-214ENST00000494047 AP1M1Q9BXS5 423 aa12.34□□□□□ -0.43
RFC4-214ENST00000494047 KDM4CQ9H3R0 1056 aa12.34□□□□□ -0.43
RFC4-214ENST00000494047 AVENQ9NQS1 362 aaPredicted RBP12.34□□□□□ -0.43
RFC4-214ENST00000494047 SEPT11Q9NVA2 429 aaKnown RBP12.34□□□□□ -0.43
RFC4-214ENST00000494047 SAGE1Q9NXZ1 904 aa12.34□□□□□ -0.43
RFC4-214ENST00000494047 RGL1Q9NZL6 768 aa12.34□□□□□ -0.43
RFC4-214ENST00000494047 WHRNQ9P202 907 aa12.34□□□□□ -0.43
RFC4-214ENST00000494047 COQ4Q9Y3A0 265 aa12.34□□□□□ -0.43
RFC4-214ENST00000494047 A0A1B0GUA9 196 aa12.33□□□□□ -0.44
RFC4-214ENST00000494047 ZSCAN5CA6NGD5 496 aaPredicted RBP12.33□□□□□ -0.44
RFC4-214ENST00000494047 TCP10L2B9ZVM9 353 aa12.33□□□□□ -0.44
RFC4-214ENST00000494047 MYO1FO00160 1098 aa12.33□□□□□ -0.44
RFC4-214ENST00000494047 WDR46O15213 610 aaKnown RBP12.33□□□□□ -0.44
RFC4-214ENST00000494047 RGS16O15492 202 aaPredicted RBP12.33□□□□□ -0.44
RFC4-214ENST00000494047 GDF11O95390 407 aa12.33□□□□□ -0.44
RFC4-214ENST00000494047 GAS8O95995 478 aa12.33□□□□□ -0.44
RFC4-214ENST00000494047 RDXP35241 583 aaKnown RBP12.33□□□□□ -0.44
RFC4-214ENST00000494047 GPC3P51654 580 aa12.33□□□□□ -0.44
RFC4-214ENST00000494047 RWDD2BP57060 319 aa12.33□□□□□ -0.44
RFC4-214ENST00000494047 GUCY1A3Q02108 690 aa12.33□□□□□ -0.44
RFC4-214ENST00000494047 GCNT1Q02742 428 aa12.33□□□□□ -0.44
RFC4-214ENST00000494047 ACTN3Q08043 901 aaPredicted RBP12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms