RNA–Protein interactions for RNA: ENST00000493940.2

HSPG2-212, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-212ENST00000493940 HIP1RO75146 1068 aa13.93□□□□□ -0.18
HSPG2-212ENST00000493940 ALDH2P05091 517 aa13.93□□□□□ -0.18
HSPG2-212ENST00000493940 SSBP05455 408 aaKnown RBP eCLIP13.93□□□□□ -0.18
HSPG2-212ENST00000493940 PRKCBP05771 671 aa13.93□□□□□ -0.18
HSPG2-212ENST00000493940 CTSAP10619 480 aa13.93□□□□□ -0.18
HSPG2-212ENST00000493940 ALADP13716 330 aa13.93□□□□□ -0.18
HSPG2-212ENST00000493940 EPCAMP16422 314 aa13.93□□□□□ -0.18
HSPG2-212ENST00000493940 NAMPTP43490 491 aa13.93□□□□□ -0.18
HSPG2-212ENST00000493940 NPTX2P47972 431 aa13.93□□□□□ -0.18
HSPG2-212ENST00000493940 PEX3P56589 373 aa13.93□□□□□ -0.18
HSPG2-212ENST00000493940 RAD51AP2Q09MP3 1159 aa13.93□□□□□ -0.18
HSPG2-212ENST00000493940 PCBP1Q15365 356 aaKnown RBP eCLIP13.93□□□□□ -0.185e-7■■■□□ 17.6
HSPG2-212ENST00000493940 ZRSR1Q15695 479 aaKnown RBP13.93□□□□□ -0.18
HSPG2-212ENST00000493940 NAB2Q15742 525 aa13.93□□□□□ -0.18
HSPG2-212ENST00000493940 KRT79Q5XKE5 535 aa13.93□□□□□ -0.18
HSPG2-212ENST00000493940 ANKRD54Q6NXT1 300 aa13.93□□□□□ -0.18
HSPG2-212ENST00000493940 USP49Q70CQ1 688 aa13.93□□□□□ -0.18
HSPG2-212ENST00000493940 ADHFE1Q8IWW8 467 aa13.93□□□□□ -0.18
HSPG2-212ENST00000493940 C12orf76Q8N812 135 aaPredicted RBP13.93□□□□□ -0.18
HSPG2-212ENST00000493940 SLC22A17Q8WUG5 538 aa13.93□□□□□ -0.18
HSPG2-212ENST00000493940 SUSD6Q92537 303 aa13.93□□□□□ -0.18
HSPG2-212ENST00000493940 CCDC51Q96ER9 411 aa13.93□□□□□ -0.18
HSPG2-212ENST00000493940 TMEM169Q96HH4 297 aa13.93□□□□□ -0.18
HSPG2-212ENST00000493940 B3GALT6Q96L58 329 aa13.93□□□□□ -0.18
HSPG2-212ENST00000493940 PRMT7Q9NVM4 692 aaPredicted RBP13.93□□□□□ -0.18
HSPG2-212ENST00000493940 SNTG2Q9NY99 539 aa13.93□□□□□ -0.18
HSPG2-212ENST00000493940 DNM3Q9UQ16 869 aa13.93□□□□□ -0.18
HSPG2-212ENST00000493940 PRG3Q9Y2Y8 225 aaPredicted RBP13.93□□□□□ -0.18
HSPG2-212ENST00000493940 KIF3AQ9Y496 699 aa13.93□□□□□ -0.18
HSPG2-212ENST00000493940 CLIC4Q9Y696 253 aa13.93□□□□□ -0.18
HSPG2-212ENST00000493940 PIEZO1Q92508 2521 aa13.93□□□□□ -0.18
HSPG2-212ENST00000493940 TCHHQ07283 1943 aa13.92□□□□□ -0.18
HSPG2-212ENST00000493940 MEFVO15553 781 aaPredicted RBP13.92□□□□□ -0.18
HSPG2-212ENST00000493940 WEE2P0C1S8 567 aa13.92□□□□□ -0.18
HSPG2-212ENST00000493940 SYT1P21579 422 aa13.92□□□□□ -0.18
HSPG2-212ENST00000493940 OR1G1P47890 313 aa13.92□□□□□ -0.18
HSPG2-212ENST00000493940 SLC12A3P55017 1021 aa13.92□□□□□ -0.18
HSPG2-212ENST00000493940 CACNB1Q02641 598 aaPredicted RBP13.92□□□□□ -0.18
HSPG2-212ENST00000493940 RESTQ13127 1097 aa13.92□□□□□ -0.18
HSPG2-212ENST00000493940 PRPF4BQ13523 1007 aaKnown RBP13.92□□□□□ -0.18
HSPG2-212ENST00000493940 SMC1AQ14683 1233 aaKnown RBP13.92□□□□□ -0.18
HSPG2-212ENST00000493940 PTPAQ15257 358 aa13.92□□□□□ -0.18
HSPG2-212ENST00000493940 SF3A1Q15459 793 aaKnown RBP13.92□□□□□ -0.18
HSPG2-212ENST00000493940 PTPN14Q15678 1187 aa13.92□□□□□ -0.18
HSPG2-212ENST00000493940 TMEM119Q4V9L6 283 aa13.92□□□□□ -0.18
HSPG2-212ENST00000493940 RNF168Q8IYW5 571 aaPredicted RBP13.92□□□□□ -0.18
HSPG2-212ENST00000493940 CEP120Q8N960 986 aa13.92□□□□□ -0.18
HSPG2-212ENST00000493940 CNNM3Q8NE01 707 aa13.92□□□□□ -0.18
HSPG2-212ENST00000493940 URGCPQ8TCY9 931 aa13.92□□□□□ -0.18
HSPG2-212ENST00000493940 PRIMPOLQ96LW4 560 aa13.92□□□□□ -0.18
HSPG2-212ENST00000493940 CDCA3Q99618 268 aaPredicted RBP13.92□□□□□ -0.18
HSPG2-212ENST00000493940 TMEM175Q9BSA9 504 aa13.92□□□□□ -0.18
HSPG2-212ENST00000493940 GPR62Q9BZJ7 368 aa13.92□□□□□ -0.18
HSPG2-212ENST00000493940 BLOC1S4Q9NUP1 217 aa13.92□□□□□ -0.18
HSPG2-212ENST00000493940 PARP2Q9UGN5 583 aa13.92□□□□□ -0.18
HSPG2-212ENST00000493940 GIT1Q9Y2X7 761 aa13.92□□□□□ -0.18
HSPG2-212ENST00000493940 IRAK3Q9Y616 596 aa13.92□□□□□ -0.18
HSPG2-212ENST00000493940 NOTCH4Q99466 2003 aa13.91□□□□□ -0.18
HSPG2-212ENST00000493940 VPS37CA5D8V6 355 aaPredicted RBP13.91□□□□□ -0.18
HSPG2-212ENST00000493940 ABLIM1O14639 778 aa13.91□□□□□ -0.18
HSPG2-212ENST00000493940 CNPP09543 421 aaKnown RBP13.91□□□□□ -0.18
HSPG2-212ENST00000493940 SSTR3P32745 418 aaPredicted RBP13.91□□□□□ -0.18
HSPG2-212ENST00000493940 MAPK6Q16659 721 aa13.91□□□□□ -0.18
HSPG2-212ENST00000493940 SPECC1Q5M775 1068 aa13.91□□□□□ -0.18
HSPG2-212ENST00000493940 ARL6IP4Q66PJ3 421 aaKnown RBP13.91□□□□□ -0.18
HSPG2-212ENST00000493940 ZBTB8OSQ8IWT0 167 aa13.91□□□□□ -0.18
HSPG2-212ENST00000493940 TMEM130Q8N3G9 435 aa13.91□□□□□ -0.18
HSPG2-212ENST00000493940 SYT2Q8N9I0 419 aaPredicted RBP13.91□□□□□ -0.18
HSPG2-212ENST00000493940 DEPTORQ8TB45 409 aa13.91□□□□□ -0.18
HSPG2-212ENST00000493940 KIFAP3Q92845 792 aa13.91□□□□□ -0.18
HSPG2-212ENST00000493940 PPP2R3CQ969Q6 453 aa13.91□□□□□ -0.18
HSPG2-212ENST00000493940 ZBTB45Q96K62 511 aaPredicted RBP13.91□□□□□ -0.18
HSPG2-212ENST00000493940 KLHL5Q96PQ7 755 aa13.91□□□□□ -0.18
HSPG2-212ENST00000493940 FAM193BQ96PV7 902 aaPredicted RBP13.91□□□□□ -0.18
HSPG2-212ENST00000493940 PTPRHQ9HD43 1115 aa13.91□□□□□ -0.18
HSPG2-212ENST00000493940 UBN1Q9NPG3 1134 aa13.91□□□□□ -0.18
HSPG2-212ENST00000493940 KANSL3Q9P2N6 904 aa13.91□□□□□ -0.18
HSPG2-212ENST00000493940 PRKAG3Q9UGI9 489 aa13.91□□□□□ -0.18
HSPG2-212ENST00000493940 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.9□□□□□ -0.18
HSPG2-212ENST00000493940 CCDC169A6NNP5 214 aa13.9□□□□□ -0.18
HSPG2-212ENST00000493940 LOC730098B7Z3J9 87 aa13.9□□□□□ -0.18
HSPG2-212ENST00000493940 SLC16A4O15374 487 aa13.9□□□□□ -0.18
HSPG2-212ENST00000493940 RECQL4O94761 1208 aa13.9□□□□□ -0.18
HSPG2-212ENST00000493940 MYBP10242 640 aa13.9□□□□□ -0.18
HSPG2-212ENST00000493940 CA8P35219 290 aa13.9□□□□□ -0.18
HSPG2-212ENST00000493940 NCBP1Q09161 790 aaKnown RBP13.9□□□□□ -0.18
HSPG2-212ENST00000493940 KIAA0319Q5VV43 1072 aa13.9□□□□□ -0.18
HSPG2-212ENST00000493940 CD300LGQ6UXG3 332 aa13.9□□□□□ -0.18
HSPG2-212ENST00000493940 CABP7Q86V35 215 aa13.9□□□□□ -0.18
HSPG2-212ENST00000493940 ACO2Q99798 780 aaKnown RBP13.9□□□□□ -0.18
HSPG2-212ENST00000493940 RAB34Q9BZG1 259 aa13.9□□□□□ -0.18
HSPG2-212ENST00000493940 TRIM6Q9C030 488 aaPredicted RBP13.9□□□□□ -0.18
HSPG2-212ENST00000493940 HAPLN2Q9GZV7 340 aa13.9□□□□□ -0.18
HSPG2-212ENST00000493940 C2orf40Q9H1Z8 148 aa13.9□□□□□ -0.18
HSPG2-212ENST00000493940 ARHGAP28Q9P2N2 729 aa13.9□□□□□ -0.18
HSPG2-212ENST00000493940 MTMR6Q9Y217 621 aa13.9□□□□□ -0.18
HSPG2-212ENST00000493940 GDAQ9Y2T3 454 aa13.9□□□□□ -0.18
HSPG2-212ENST00000493940 GTF3C3Q9Y5Q9 886 aa13.9□□□□□ -0.18
HSPG2-212ENST00000493940 ZNF318Q5VUA4 2279 aa13.9□□□□□ -0.18
HSPG2-212ENST00000493940 K7ERI5 159 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms