RNA–Protein interactions for RNA: ENST00000493815.5

PDLIM7-208, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,686 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-208ENST00000493815 TLL1O43897 1013 aa19.57■□□□□ 0.72
PDLIM7-208ENST00000493815 ZNF623O75123 536 aa19.57■□□□□ 0.72
PDLIM7-208ENST00000493815 PIGRP01833 764 aa19.57■□□□□ 0.72
PDLIM7-208ENST00000493815 STAG3L1P0CL83 205 aa19.57■□□□□ 0.72
PDLIM7-208ENST00000493815 ABCD1P33897 745 aa19.57■□□□□ 0.72
PDLIM7-208ENST00000493815 PAN2Q504Q3 1202 aaKnown RBP19.57■□□□□ 0.72
PDLIM7-208ENST00000493815 AGMOQ6ZNB7 445 aa19.57■□□□□ 0.72
PDLIM7-208ENST00000493815 YME1L1Q96TA2 773 aa19.57■□□□□ 0.72
PDLIM7-208ENST00000493815 EXOC7Q9UPT5 735 aa19.57■□□□□ 0.72
PDLIM7-208ENST00000493815 LCHNA4D1U4 455 aa19.56■□□□□ 0.72
PDLIM7-208ENST00000493815 DGKIO75912 1065 aa19.56■□□□□ 0.72
PDLIM7-208ENST00000493815 MBD3O95983 291 aa19.56■□□□□ 0.72
PDLIM7-208ENST00000493815 ADSSP30520 456 aa19.56■□□□□ 0.72
PDLIM7-208ENST00000493815 AFF1P51825 1210 aaKnown RBP19.56■□□□□ 0.72
PDLIM7-208ENST00000493815 NOLC1Q14978 699 aaKnown RBP eCLIP19.56■□□□□ 0.72
PDLIM7-208ENST00000493815 CLLU1OSQ5K130 101 aa19.56■□□□□ 0.72
PDLIM7-208ENST00000493815 FAM43BQ6ZT52 329 aaPredicted RBP19.56■□□□□ 0.72
PDLIM7-208ENST00000493815 MRPL10Q7Z7H8 261 aaKnown RBP19.56■□□□□ 0.72
PDLIM7-208ENST00000493815 TMEM192Q8IY95 271 aa19.56■□□□□ 0.72
PDLIM7-208ENST00000493815 THNSL1Q8IYQ7 743 aa19.56■□□□□ 0.72
PDLIM7-208ENST00000493815 PBX4Q9BYU1 374 aa19.56■□□□□ 0.72
PDLIM7-208ENST00000493815 ELAC1Q9H777 363 aaKnown RBP19.56■□□□□ 0.72
PDLIM7-208ENST00000493815 TMEM206Q9H813 350 aa19.56■□□□□ 0.72
PDLIM7-208ENST00000493815 RMND1Q9NWS8 449 aa19.56■□□□□ 0.72
PDLIM7-208ENST00000493815 SNTG2Q9NY99 539 aa19.56■□□□□ 0.72
PDLIM7-208ENST00000493815 KLK14Q9P0G3 267 aa19.56■□□□□ 0.72
PDLIM7-208ENST00000493815 KIAA1468Q9P260 1216 aa19.56■□□□□ 0.72
PDLIM7-208ENST00000493815 A0A1W2PPC1 479 aa19.56■□□□□ 0.72
PDLIM7-208ENST00000493815 EOMESO95936 686 aa19.56■□□□□ 0.72
PDLIM7-208ENST00000493815 SKIP12755 728 aa19.56■□□□□ 0.72
PDLIM7-208ENST00000493815 ITGA4P13612 1032 aa19.56■□□□□ 0.72
PDLIM7-208ENST00000493815 MCL1Q07820 350 aa19.56■□□□□ 0.72
PDLIM7-208ENST00000493815 DCAF4L1Q3SXM0 396 aa19.56■□□□□ 0.72
PDLIM7-208ENST00000493815 ZBTB41Q5SVQ8 909 aa19.56■□□□□ 0.72
PDLIM7-208ENST00000493815 HELQQ8TDG4 1101 aa19.56■□□□□ 0.72
PDLIM7-208ENST00000493815 CXCL16Q9H2A7 254 aa19.56■□□□□ 0.72
PDLIM7-208ENST00000493815 PARP2Q9UGN5 583 aa19.56■□□□□ 0.72
PDLIM7-208ENST00000493815 INPP5FQ9Y2H2 1132 aa19.56■□□□□ 0.72
PDLIM7-208ENST00000493815 YBX2Q9Y2T7 364 aaKnown RBP19.56■□□□□ 0.72
PDLIM7-208ENST00000493815 TGFB1I1O43294 461 aa19.55■□□□□ 0.72
PDLIM7-208ENST00000493815 MCF2P10911 925 aa19.55■□□□□ 0.72
PDLIM7-208ENST00000493815 BMP6P22004 513 aa19.55■□□□□ 0.72
PDLIM7-208ENST00000493815 BMT2Q1RMZ1 405 aa19.55■□□□□ 0.72
PDLIM7-208ENST00000493815 ZNF658Q5TYW1 1059 aaPredicted RBP19.55■□□□□ 0.72
PDLIM7-208ENST00000493815 ZSWIM2Q8NEG5 633 aa19.55■□□□□ 0.72
PDLIM7-208ENST00000493815 POMGNT1Q8WZA1 660 aa19.55■□□□□ 0.72
PDLIM7-208ENST00000493815 ZFP42Q96MM3 310 aa19.55■□□□□ 0.72
PDLIM7-208ENST00000493815 RAD9AQ99638 391 aa19.55■□□□□ 0.72
PDLIM7-208ENST00000493815 CBWD1Q9BRT8 395 aa19.55■□□□□ 0.72
PDLIM7-208ENST00000493815 MSTO1Q9BUK6 570 aa19.55■□□□□ 0.72
PDLIM7-208ENST00000493815 PCIF1Q9H4Z3 704 aa19.55■□□□□ 0.72
PDLIM7-208ENST00000493815 HCSTQ9UBK5 93 aa19.55■□□□□ 0.72
PDLIM7-208ENST00000493815 A0A0B4J269 797 aa19.54■□□□□ 0.72
PDLIM7-208ENST00000493815 TBKBP1A7MCY6 615 aa19.54■□□□□ 0.72
PDLIM7-208ENST00000493815 SOX1O00570 391 aaPredicted RBP19.54■□□□□ 0.72
PDLIM7-208ENST00000493815 ARHGEF15O94989 841 aa19.54■□□□□ 0.72
PDLIM7-208ENST00000493815 HTRA4P83105 476 aaPredicted RBP19.54■□□□□ 0.72
PDLIM7-208ENST00000493815 KNOP1Q1ED39 458 aaKnown RBP19.54■□□□□ 0.72
PDLIM7-208ENST00000493815 LRIT3Q3SXY7 679 aa19.54■□□□□ 0.72
PDLIM7-208ENST00000493815 ZNF689Q96CS4 500 aaPredicted RBP19.54■□□□□ 0.72
PDLIM7-208ENST00000493815 PGBD4Q96DM1 585 aa19.54■□□□□ 0.72
PDLIM7-208ENST00000493815 GBP3Q9H0R5 595 aa19.54■□□□□ 0.72
PDLIM7-208ENST00000493815 RC3H2Q9HBD1 1191 aaKnown RBP19.54■□□□□ 0.72
PDLIM7-208ENST00000493815 CHD9Q3L8U1 2897 aa19.54■□□□□ 0.72
PDLIM7-208ENST00000493815 SZT2Q5T011 3432 aa19.54■□□□□ 0.72
PDLIM7-208ENST00000493815 CLIC2O15247 247 aa19.53■□□□□ 0.72
PDLIM7-208ENST00000493815 RECQL4O94761 1208 aa19.53■□□□□ 0.72
PDLIM7-208ENST00000493815 CA3P07451 260 aa19.53■□□□□ 0.72
PDLIM7-208ENST00000493815 MLH1P40692 756 aa19.53■□□□□ 0.72
PDLIM7-208ENST00000493815 TNFSF9P41273 254 aa19.53■□□□□ 0.72
PDLIM7-208ENST00000493815 PRCPP42785 496 aa19.53■□□□□ 0.72
PDLIM7-208ENST00000493815 SPRED2Q7Z698 418 aa19.53■□□□□ 0.72
PDLIM7-208ENST00000493815 ABI1Q8IZP0 508 aa19.53■□□□□ 0.72
PDLIM7-208ENST00000493815 NOC3LQ8WTT2 800 aaKnown RBP19.53■□□□□ 0.72
PDLIM7-208ENST00000493815 SAAL1Q96ER3 474 aa19.53■□□□□ 0.72
PDLIM7-208ENST00000493815 CASD1Q96PB1 797 aa19.53■□□□□ 0.72
PDLIM7-208ENST00000493815 GAD1Q99259 594 aa19.53■□□□□ 0.72
PDLIM7-208ENST00000493815 RSAD1Q9HA92 442 aa19.53■□□□□ 0.72
PDLIM7-208ENST00000493815 INSL6Q9Y581 213 aa19.53■□□□□ 0.72
PDLIM7-208ENST00000493815 STYXL1Q9Y6J8 313 aa19.53■□□□□ 0.72
PDLIM7-208ENST00000493815 CDH23Q9H251 3354 aa19.53■□□□□ 0.72
PDLIM7-208ENST00000493815 UBE4BO95155 1302 aa19.53■□□□□ 0.72
PDLIM7-208ENST00000493815 COL4A6Q14031 1691 aa19.53■□□□□ 0.72
PDLIM7-208ENST00000493815 FAM189A1O60320 539 aa19.52■□□□□ 0.72
PDLIM7-208ENST00000493815 OFD1O75665 1012 aa19.52■□□□□ 0.72
PDLIM7-208ENST00000493815 ACOT2P49753 483 aa19.52■□□□□ 0.72
PDLIM7-208ENST00000493815 MORC3Q14149 939 aa19.52■□□□□ 0.72
PDLIM7-208ENST00000493815 GLB1LQ6UWU2 654 aa19.52■□□□□ 0.72
PDLIM7-208ENST00000493815 APBB1IPQ7Z5R6 666 aaPredicted RBP19.52■□□□□ 0.72
PDLIM7-208ENST00000493815 NKX2-4Q9H2Z4 354 aa19.52■□□□□ 0.72
PDLIM7-208ENST00000493815 KCTD10Q9H3F6 313 aa19.52■□□□□ 0.72
PDLIM7-208ENST00000493815 AGPAT3Q9NRZ7 376 aa19.52■□□□□ 0.72
PDLIM7-208ENST00000493815 TMEM63CQ9P1W3 806 aa19.52■□□□□ 0.72
PDLIM7-208ENST00000493815 AGO2Q9UKV8 859 aaKnown RBP19.52■□□□□ 0.72
PDLIM7-208ENST00000493815 CHD7Q9P2D1 2997 aa19.52■□□□□ 0.72
PDLIM7-208ENST00000493815 GOLGA8IPA6NC78 632 aa19.52■□□□□ 0.71
PDLIM7-208ENST00000493815 ARL5CA6NH57 179 aa19.52■□□□□ 0.71
PDLIM7-208ENST00000493815 GOLGA8JA6NMD2 632 aa19.52■□□□□ 0.71
PDLIM7-208ENST00000493815 MEFVO15553 781 aaPredicted RBP19.52■□□□□ 0.71
PDLIM7-208ENST00000493815 DNAJB2P25686 324 aa19.52■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms