RNA–Protein interactions for RNA: ENST00000493786.2

VEGFA-214, Transcript of vascular endothelial growth factor A, humanhuman

TSL 2

Gene VEGFA, Length 551 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-214ENST00000493786 MCL1Q07820 350 aa8.3□□□□□ -1.08
VEGFA-214ENST00000493786 KCNA1Q09470 495 aa8.3□□□□□ -1.08
VEGFA-214ENST00000493786 PAK1Q13153 545 aa8.3□□□□□ -1.08
VEGFA-214ENST00000493786 STX1AQ16623 288 aa8.3□□□□□ -1.08
VEGFA-214ENST00000493786 TCTN1Q2MV58 587 aa8.3□□□□□ -1.08
VEGFA-214ENST00000493786 COBLL1Q53SF7 1204 aa8.3□□□□□ -1.08
VEGFA-214ENST00000493786 EEF1DP3Q658K8 133 aa8.3□□□□□ -1.08
VEGFA-214ENST00000493786 CHRDL2Q6WN34 429 aa8.3□□□□□ -1.08
VEGFA-214ENST00000493786 RBM43Q6ZSC3 357 aaKnown RBP8.3□□□□□ -1.08
VEGFA-214ENST00000493786 C16orf59Q7L2K0 433 aa8.3□□□□□ -1.08
VEGFA-214ENST00000493786 THNSL1Q8IYQ7 743 aa8.3□□□□□ -1.08
VEGFA-214ENST00000493786 PHOSPHO2Q8TCD6 241 aa8.3□□□□□ -1.08
VEGFA-214ENST00000493786 URGCPQ8TCY9 931 aa8.3□□□□□ -1.08
VEGFA-214ENST00000493786 LINC01599Q8WXQ3 324 aa8.3□□□□□ -1.08
VEGFA-214ENST00000493786 RSPH1Q8WYR4 309 aa8.3□□□□□ -1.08
VEGFA-214ENST00000493786 DHTKD1Q96HY7 919 aaPredicted RBP8.3□□□□□ -1.08
VEGFA-214ENST00000493786 RPS6KC1Q96S38 1066 aa8.3□□□□□ -1.08
VEGFA-214ENST00000493786 EIF2AQ9BY44 585 aaKnown RBP8.3□□□□□ -1.08
VEGFA-214ENST00000493786 CDT1Q9H211 546 aa8.3□□□□□ -1.08
VEGFA-214ENST00000493786 ELAC1Q9H777 363 aaKnown RBP8.3□□□□□ -1.08
VEGFA-214ENST00000493786 AGPAT3Q9NRZ7 376 aa8.3□□□□□ -1.08
VEGFA-214ENST00000493786 ANO10Q9NW15 660 aa8.3□□□□□ -1.08
VEGFA-214ENST00000493786 TMEM161AQ9NX61 479 aa8.3□□□□□ -1.08
VEGFA-214ENST00000493786 AGO2Q9UKV8 859 aaKnown RBP8.3□□□□□ -1.08
VEGFA-214ENST00000493786 CTNND2Q9UQB3 1225 aa8.3□□□□□ -1.08
VEGFA-214ENST00000493786 IPPQ9Y573 584 aa8.3□□□□□ -1.08
VEGFA-214ENST00000493786 TNRC18O15417 2968 aaPredicted RBP8.29□□□□□ -1.08
VEGFA-214ENST00000493786 SIP14410 1827 aa8.29□□□□□ -1.08
VEGFA-214ENST00000493786 SCN5AQ14524 2016 aa8.29□□□□□ -1.08
VEGFA-214ENST00000493786 A0A0B4J269 797 aa8.29□□□□□ -1.08
VEGFA-214ENST00000493786 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.29□□□□□ -1.08
VEGFA-214ENST00000493786 ANKRD63C9JTQ0 380 aa8.29□□□□□ -1.08
VEGFA-214ENST00000493786 CLIC2O15247 247 aa8.29□□□□□ -1.08
VEGFA-214ENST00000493786 OGTO15294 1046 aa8.29□□□□□ -1.08
VEGFA-214ENST00000493786 EXOC3O60645 756 aa8.29□□□□□ -1.08
VEGFA-214ENST00000493786 ZNF623O75123 536 aa8.29□□□□□ -1.08
VEGFA-214ENST00000493786 EDN1P05305 212 aa8.29□□□□□ -1.08
VEGFA-214ENST00000493786 CLTAP09496 248 aa8.29□□□□□ -1.08
VEGFA-214ENST00000493786 PROZP22891 400 aa8.29□□□□□ -1.08
VEGFA-214ENST00000493786 GRM5P41594 1212 aa8.29□□□□□ -1.08
VEGFA-214ENST00000493786 CYP2J2P51589 502 aa8.29□□□□□ -1.08
VEGFA-214ENST00000493786 OSTNP61366 133 aa8.29□□□□□ -1.08
VEGFA-214ENST00000493786 DEFB103AP81534 67 aa8.29□□□□□ -1.08
VEGFA-214ENST00000493786 LRRC63Q05C16 580 aa8.29□□□□□ -1.08
VEGFA-214ENST00000493786 SHHQ15465 462 aa8.29□□□□□ -1.08
VEGFA-214ENST00000493786 TPD52L1Q16890 204 aaPredicted RBP8.29□□□□□ -1.08
VEGFA-214ENST00000493786 C9orf50Q5SZB4 431 aa8.29□□□□□ -1.08
VEGFA-214ENST00000493786 UBXN11Q5T124 520 aa8.29□□□□□ -1.08
VEGFA-214ENST00000493786 PRPF38BQ5VTL8 546 aaKnown RBP8.29□□□□□ -1.08
VEGFA-214ENST00000493786 FAM117BQ6P1L5 589 aa8.29□□□□□ -1.08
VEGFA-214ENST00000493786 GLB1LQ6UWU2 654 aa8.29□□□□□ -1.08
VEGFA-214ENST00000493786 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.29□□□□□ -1.085e-35■■■□□ 16.9
VEGFA-214ENST00000493786 RTN4RL1Q86UN2 441 aaPredicted RBP8.29□□□□□ -1.08
VEGFA-214ENST00000493786 TDHQ8IZJ6 230 aa8.29□□□□□ -1.08
VEGFA-214ENST00000493786 ADSSL1Q8N142 457 aa8.29□□□□□ -1.08
VEGFA-214ENST00000493786 NELFBQ8WX92 580 aa8.29□□□□□ -1.08
VEGFA-214ENST00000493786 P2RX5Q93086 422 aa8.29□□□□□ -1.08
VEGFA-214ENST00000493786 VWCEQ96DN2 955 aa8.29□□□□□ -1.08
VEGFA-214ENST00000493786 ZBTB45Q96K62 511 aaPredicted RBP8.29□□□□□ -1.08
VEGFA-214ENST00000493786 ACAP3Q96P50 834 aa8.29□□□□□ -1.08
VEGFA-214ENST00000493786 YME1L1Q96TA2 773 aa8.29□□□□□ -1.08
VEGFA-214ENST00000493786 FAM213AQ9BRX8 229 aa8.29□□□□□ -1.08
VEGFA-214ENST00000493786 NAT10Q9H0A0 1025 aaKnown RBP8.29□□□□□ -1.08
VEGFA-214ENST00000493786 NXF3Q9H4D5 531 aaKnown RBP8.29□□□□□ -1.08
VEGFA-214ENST00000493786 PCIF1Q9H4Z3 704 aa8.29□□□□□ -1.08
VEGFA-214ENST00000493786 RPF1Q9H9Y2 349 aaKnown RBP8.29□□□□□ -1.08
VEGFA-214ENST00000493786 RSAD1Q9HA92 442 aa8.29□□□□□ -1.08
VEGFA-214ENST00000493786 KIAA1586Q9HCI6 787 aa8.29□□□□□ -1.08
VEGFA-214ENST00000493786 PTPRHQ9HD43 1115 aa8.29□□□□□ -1.08
VEGFA-214ENST00000493786 CXXC1Q9P0U4 656 aaPredicted RBP8.29□□□□□ -1.08
VEGFA-214ENST00000493786 FRMD4BQ9Y2L6 1034 aa8.29□□□□□ -1.08
VEGFA-214ENST00000493786 GIT1Q9Y2X7 761 aa8.29□□□□□ -1.08
VEGFA-214ENST00000493786 STYXL1Q9Y6J8 313 aa8.29□□□□□ -1.08
VEGFA-214ENST00000493786 ZMYM2Q9UBW7 1377 aa8.29□□□□□ -1.08
VEGFA-214ENST00000493786 SYCE3A1L190 88 aa8.28□□□□□ -1.08
VEGFA-214ENST00000493786 TBKBP1A7MCY6 615 aa8.28□□□□□ -1.08
VEGFA-214ENST00000493786 TISP43B9A030 160 aa8.28□□□□□ -1.08
VEGFA-214ENST00000493786 CETN3O15182 167 aa8.28□□□□□ -1.08
VEGFA-214ENST00000493786 TLL1O43897 1013 aa8.28□□□□□ -1.08
VEGFA-214ENST00000493786 EXTL3O43909 919 aa8.28□□□□□ -1.08
VEGFA-214ENST00000493786 FGFR1OPO95684 399 aaKnown RBP8.28□□□□□ -1.08
VEGFA-214ENST00000493786 NR3C1P04150 777 aa8.28□□□□□ -1.08
VEGFA-214ENST00000493786 NR2F2P24468 414 aa8.28□□□□□ -1.08
VEGFA-214ENST00000493786 AKAP5P24588 427 aa8.28□□□□□ -1.08
VEGFA-214ENST00000493786 CCNE1P24864 410 aa8.28□□□□□ -1.08
VEGFA-214ENST00000493786 FAM189BP81408 668 aa8.28□□□□□ -1.08
VEGFA-214ENST00000493786 RNASELQ05823 741 aaKnown RBP8.28□□□□□ -1.08
VEGFA-214ENST00000493786 PPP2R3AQ06190 1150 aa8.28□□□□□ -1.08
VEGFA-214ENST00000493786 TYRO3Q06418 890 aa8.28□□□□□ -1.08
VEGFA-214ENST00000493786 MYBPC2Q14324 1141 aa8.28□□□□□ -1.08
VEGFA-214ENST00000493786 EDRF1Q3B7T1 1238 aa8.28□□□□□ -1.08
VEGFA-214ENST00000493786 ZSCAN23Q3MJ62 389 aa8.28□□□□□ -1.08
VEGFA-214ENST00000493786 CT47A1Q5JQC4 288 aaPredicted RBP8.28□□□□□ -1.08
VEGFA-214ENST00000493786 CEP135Q66GS9 1140 aa8.28□□□□□ -1.08
VEGFA-214ENST00000493786 SLC39A4Q6P5W5 647 aa8.28□□□□□ -1.08
VEGFA-214ENST00000493786 MRPL10Q7Z7H8 261 aaKnown RBP8.28□□□□□ -1.08
VEGFA-214ENST00000493786 USP37Q86T82 979 aa8.28□□□□□ -1.08
VEGFA-214ENST00000493786 HERC6Q8IVU3 1022 aa8.28□□□□□ -1.08
VEGFA-214ENST00000493786 C12orf56Q8IXR9 622 aa8.28□□□□□ -1.08
VEGFA-214ENST00000493786 GPD1LQ8N335 351 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms