RNA–Protein interactions for RNA: ENST00000493695.1

SMC4-223, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 457 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-223ENST00000493695 ANKS6Q68DC2 871 aa6.15□□□□□ -1.42
SMC4-223ENST00000493695 SLC44A3Q8N4M1 653 aa6.15□□□□□ -1.42
SMC4-223ENST00000493695 MDM1Q8TC05 714 aa6.15□□□□□ -1.42
SMC4-223ENST00000493695 R3HDMLQ9H3Y0 253 aa6.15□□□□□ -1.42
SMC4-223ENST00000493695 KCNG1Q9UIX4 513 aa6.15□□□□□ -1.42
SMC4-223ENST00000493695 PRSS38A1L453 326 aa6.14□□□□□ -1.43
SMC4-223ENST00000493695 DIRC3C9JPN6 131 aa6.14□□□□□ -1.43
SMC4-223ENST00000493695 F2P00734 622 aa6.14□□□□□ -1.43
SMC4-223ENST00000493695 PFKMP08237 780 aa6.14□□□□□ -1.43
SMC4-223ENST00000493695 RBP3P10745 1247 aa6.14□□□□□ -1.43
SMC4-223ENST00000493695 ITGAMP11215 1152 aa6.14□□□□□ -1.43
SMC4-223ENST00000493695 CDK4P11802 303 aa6.14□□□□□ -1.43
SMC4-223ENST00000493695 CANXP27824 592 aaKnown RBP6.14□□□□□ -1.43
SMC4-223ENST00000493695 RESTQ13127 1097 aa6.14□□□□□ -1.43
SMC4-223ENST00000493695 SPATA5L1Q9BVQ7 753 aa6.14□□□□□ -1.43
SMC4-223ENST00000493695 KANSL2Q9H9L4 492 aa6.14□□□□□ -1.43
SMC4-223ENST00000493695 KIAA1586Q9HCI6 787 aa6.14□□□□□ -1.43
SMC4-223ENST00000493695 TESQ9UGI8 421 aaKnown RBP6.14□□□□□ -1.43
SMC4-223ENST00000493695 CHST2Q9Y4C5 530 aa6.14□□□□□ -1.43
SMC4-223ENST00000493695 EPN1Q9Y6I3 576 aaPredicted RBP6.14□□□□□ -1.43
SMC4-223ENST00000493695 B5MCH6 92 aa6.13□□□□□ -1.43
SMC4-223ENST00000493695 SEC24DO94855 1032 aaPredicted RBP6.13□□□□□ -1.43
SMC4-223ENST00000493695 ZSCAN20P17040 1043 aaPredicted RBP6.13□□□□□ -1.43
SMC4-223ENST00000493695 BMPR1AP36894 532 aa6.13□□□□□ -1.43
SMC4-223ENST00000493695 GPR15P49685 360 aa6.13□□□□□ -1.43
SMC4-223ENST00000493695 SEC24CP53992 1094 aa6.13□□□□□ -1.43
SMC4-223ENST00000493695 HDGFL2Q7Z4V5 671 aaPredicted RBP6.13□□□□□ -1.43
SMC4-223ENST00000493695 SYT12Q8IV01 421 aa6.13□□□□□ -1.43
SMC4-223ENST00000493695 MS4A5Q9H3V2 200 aa6.13□□□□□ -1.43
SMC4-223ENST00000493695 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.13□□□□□ -1.43
SMC4-223ENST00000493695 A0A1W2PR48 441 aa6.12□□□□□ -1.43
SMC4-223ENST00000493695 ITGA10O75578 1167 aa6.12□□□□□ -1.43
SMC4-223ENST00000493695 LTA4HP09960 611 aaKnown RBP6.12□□□□□ -1.43
SMC4-223ENST00000493695 COL11A2P13942 1736 aaPredicted RBP6.12□□□□□ -1.43
SMC4-223ENST00000493695 LSP1P33241 339 aa6.12□□□□□ -1.43
SMC4-223ENST00000493695 SCNN1BP51168 640 aa6.12□□□□□ -1.43
SMC4-223ENST00000493695 IL2P60568 153 aa6.12□□□□□ -1.43
SMC4-223ENST00000493695 FOXI1Q12951 378 aa6.12□□□□□ -1.43
SMC4-223ENST00000493695 BOLLQ8N9W6 283 aaKnown RBP6.12□□□□□ -1.43
SMC4-223ENST00000493695 NELL1Q92832 810 aa6.12□□□□□ -1.43
SMC4-223ENST00000493695 COQ10AQ96MF6 247 aa6.12□□□□□ -1.43
SMC4-223ENST00000493695 MTFR1LQ9H019 292 aa6.12□□□□□ -1.43
SMC4-223ENST00000493695 ZSWIM4Q9H7M6 989 aa6.12□□□□□ -1.43
SMC4-223ENST00000493695 COX11Q9Y6N1 276 aa6.12□□□□□ -1.43
SMC4-223ENST00000493695 FPGT-TNNI3KV9GXZ4 949 aa6.12□□□□□ -1.43
SMC4-223ENST00000493695 PIPSLA2A3N6 862 aa6.11□□□□□ -1.43
SMC4-223ENST00000493695 TBKBP1A7MCY6 615 aa6.11□□□□□ -1.43
SMC4-223ENST00000493695 TGM5O43548 720 aa6.11□□□□□ -1.43
SMC4-223ENST00000493695 SPDEFO95238 335 aa6.11□□□□□ -1.43
SMC4-223ENST00000493695 DSG1Q02413 1049 aa6.11□□□□□ -1.43
SMC4-223ENST00000493695 SPDYE7PQ495Y7 208 aa6.11□□□□□ -1.43
SMC4-223ENST00000493695 CCDC178Q5BJE1 867 aa6.11□□□□□ -1.43
SMC4-223ENST00000493695 ABHD17BQ5VST6 288 aa6.11□□□□□ -1.43
SMC4-223ENST00000493695 PDZD4Q76G19 769 aaPredicted RBP6.11□□□□□ -1.43
SMC4-223ENST00000493695 GPRIN1Q7Z2K8 1008 aa6.11□□□□□ -1.43
SMC4-223ENST00000493695 C11orf74Q86VG3 221 aa6.11□□□□□ -1.43
SMC4-223ENST00000493695 KIF18BQ86Y91 864 aa6.11□□□□□ -1.43
SMC4-223ENST00000493695 ZFP28Q8NHY6 868 aa6.11□□□□□ -1.43
SMC4-223ENST00000493695 CAGE1Q8TC20 777 aa6.11□□□□□ -1.43
SMC4-223ENST00000493695 ASB10Q8WXI3 467 aa6.11□□□□□ -1.43
SMC4-223ENST00000493695 SYBUQ9NX95 663 aa6.11□□□□□ -1.43
SMC4-223ENST00000493695 EVLQ9UI08 416 aaPredicted RBP6.11□□□□□ -1.43
SMC4-223ENST00000493695 ATP11BQ9Y2G3 1177 aa6.11□□□□□ -1.43
SMC4-223ENST00000493695 RFPL3O75679 317 aa6.1□□□□□ -1.43
SMC4-223ENST00000493695 ELLP55199 621 aaPredicted RBP6.1□□□□□ -1.43
SMC4-223ENST00000493695 OCRLQ01968 901 aa6.1□□□□□ -1.43
SMC4-223ENST00000493695 MPP3Q13368 585 aa6.1□□□□□ -1.43
SMC4-223ENST00000493695 PRR16Q569H4 304 aa6.1□□□□□ -1.43
SMC4-223ENST00000493695 DRICH1Q6PGQ1 229 aaPredicted RBP6.1□□□□□ -1.43
SMC4-223ENST00000493695 ABHD15Q6UXT9 468 aa6.1□□□□□ -1.43
SMC4-223ENST00000493695 SIMC1Q8NDZ2 872 aa6.1□□□□□ -1.43
SMC4-223ENST00000493695 OR14C36Q8NHC7 312 aa6.1□□□□□ -1.43
SMC4-223ENST00000493695 PRSS50Q9UI38 385 aa6.1□□□□□ -1.43
SMC4-223ENST00000493695 TLK1Q9UKI8 766 aa6.1□□□□□ -1.43
SMC4-223ENST00000493695 CD2APQ9Y5K6 639 aa6.1□□□□□ -1.43
SMC4-223ENST00000493695 PPP2R3BQ9Y5P8 575 aa6.1□□□□□ -1.43
SMC4-223ENST00000493695 NUMBLQ9Y6R0 609 aa6.1□□□□□ -1.43
SMC4-223ENST00000493695 KDM1AO60341 852 aa6.09□□□□□ -1.43
SMC4-223ENST00000493695 CDKL5O76039 1030 aa6.09□□□□□ -1.43
SMC4-223ENST00000493695 PTPN7P35236 360 aa6.09□□□□□ -1.43
SMC4-223ENST00000493695 CHN2P52757 468 aa6.09□□□□□ -1.43
SMC4-223ENST00000493695 EPHA10Q5JZY3 1008 aa6.09□□□□□ -1.43
SMC4-223ENST00000493695 FRMD7Q6ZUT3 714 aa6.09□□□□□ -1.43
SMC4-223ENST00000493695 LRRTM3Q86VH5 581 aa6.09□□□□□ -1.43
SMC4-223ENST00000493695 ZNF610Q8N9Z0 462 aa6.09□□□□□ -1.43
SMC4-223ENST00000493695 LINC00476Q8WZB0 136 aa6.09□□□□□ -1.43
SMC4-223ENST00000493695 SPTLC3Q9NUV7 552 aa6.09□□□□□ -1.43
SMC4-223ENST00000493695 NOX1Q9Y5S8 564 aa6.09□□□□□ -1.43
SMC4-223ENST00000493695 ESRRBO95718 433 aa6.08□□□□□ -1.44
SMC4-223ENST00000493695 C1RP00736 705 aa6.08□□□□□ -1.44
SMC4-223ENST00000493695 FOSP01100 380 aaPredicted RBP6.08□□□□□ -1.44
SMC4-223ENST00000493695 TYRP1P17643 537 aa6.08□□□□□ -1.44
SMC4-223ENST00000493695 RAP2BP61225 183 aa6.08□□□□□ -1.44
SMC4-223ENST00000493695 BLOC1S1P78537 153 aa6.08□□□□□ -1.44
SMC4-223ENST00000493695 TCEA2Q15560 299 aa6.08□□□□□ -1.44
SMC4-223ENST00000493695 BMT2Q1RMZ1 405 aa6.08□□□□□ -1.44
SMC4-223ENST00000493695 ATXN7L2Q5T6C5 722 aaPredicted RBP6.08□□□□□ -1.44
SMC4-223ENST00000493695 BTNL9Q6UXG8 535 aa6.08□□□□□ -1.44
SMC4-223ENST00000493695 GLCCI1Q86VQ1 547 aa6.08□□□□□ -1.44
SMC4-223ENST00000493695 ARHGEF25Q86VW2 580 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms