RNA–Protein interactions for RNA: ENST00000493683.5

RNF40-203, Transcript of ring finger protein 40, humanhuman

TSL 2

Gene RNF40, Length 5,371 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-203ENST00000493683 APOA1P02647 267 aa21.28■■□□□ 1
RNF40-203ENST00000493683 SERPINB9P50453 376 aa21.28■■□□□ 1
RNF40-203ENST00000493683 MED21Q13503 144 aa21.28■■□□□ 1
RNF40-203ENST00000493683 HABP4Q5JVS0 413 aaKnown RBP21.28■■□□□ 1
RNF40-203ENST00000493683 ZNF560Q96MR9 790 aa21.28■■□□□ 1
RNF40-203ENST00000493683 A2ML1A8K2U0 1454 aa21.28■■□□□ 1
RNF40-203ENST00000493683 CDH16O75309 829 aa21.28■■□□□ 1
RNF40-203ENST00000493683 IGKV5-2P06315 115 aa21.28■■□□□ 1
RNF40-203ENST00000493683 CDC27P30260 824 aa21.28■■□□□ 1
RNF40-203ENST00000493683 SLC18A3Q16572 532 aa21.28■■□□□ 1
RNF40-203ENST00000493683 GLYCTKQ8IVS8 523 aa21.28■■□□□ 1
RNF40-203ENST00000493683 SLC10A4Q96EP9 437 aa21.28■■□□□ 1
RNF40-203ENST00000493683 IRAK4Q9NWZ3 460 aa21.28■■□□□ 1
RNF40-203ENST00000493683 HDAC6Q9UBN7 1215 aa21.28■■□□□ 1
RNF40-203ENST00000493683 TRAF3IP3Q9Y228 551 aa21.28■■□□□ 1
RNF40-203ENST00000493683 EFCAB14O75071 495 aa21.28■■□□□ 1
RNF40-203ENST00000493683 CASP1P29466 404 aa21.28■■□□□ 1
RNF40-203ENST00000493683 POU5F1BQ06416 359 aa21.28■■□□□ 1
RNF40-203ENST00000493683 MIGA2Q7L4E1 593 aa21.28■■□□□ 1
RNF40-203ENST00000493683 FAM49AQ9H0Q0 323 aaPredicted RBP21.28■■□□□ 1
RNF40-203ENST00000493683 NEUROG2Q9H2A3 272 aa21.28■■□□□ 1
RNF40-203ENST00000493683 CCDC195A0A1B0GUA6 201 aa21.27■■□□□ 1
RNF40-203ENST00000493683 USP17L15C9J2P7 530 aa21.27■■□□□ 1
RNF40-203ENST00000493683 USP17L13C9JLJ4 530 aa21.27■■□□□ 1
RNF40-203ENST00000493683 USP17L11C9JVI0 530 aa21.27■■□□□ 1
RNF40-203ENST00000493683 USP17L18D6R9N7 530 aa21.27■■□□□ 1
RNF40-203ENST00000493683 USP17L22D6RA61 530 aa21.27■■□□□ 1
RNF40-203ENST00000493683 USP17L17D6RBQ6 530 aa21.27■■□□□ 1
RNF40-203ENST00000493683 USP17L19D6RCP7 530 aa21.27■■□□□ 1
RNF40-203ENST00000493683 USP17L20D6RJB6 530 aa21.27■■□□□ 1
RNF40-203ENST00000493683 PHF2O75151 1096 aa21.27■■□□□ 1
RNF40-203ENST00000493683 HADHAP40939 763 aa21.27■■□□□ 1
RNF40-203ENST00000493683 USP17L24Q0WX57 530 aa21.27■■□□□ 1
RNF40-203ENST00000493683 USP17L6PQ6QN14 398 aa21.27■■□□□ 1
RNF40-203ENST00000493683 EFHBQ8N7U6 833 aa21.27■■□□□ 1
RNF40-203ENST00000493683 FAM129AQ9BZQ8 928 aa21.27■■□□□ 1
RNF40-203ENST00000493683 PGM1P36871 562 aa21.27■■□□□ 1
RNF40-203ENST00000493683 KDM4CQ9H3R0 1056 aa21.27■■□□□ 1
RNF40-203ENST00000493683 TRABDQ9H4I3 376 aa21.27■■□□□ 1
RNF40-203ENST00000493683 GJB4Q9NTQ9 266 aa21.27■■□□□ 1
RNF40-203ENST00000493683 GTPBP10A4D1E9 387 aaKnown RBP21.27■■□□□ 1
RNF40-203ENST00000493683 USP27XA6NNY8 438 aa21.27■■□□□ 1
RNF40-203ENST00000493683 USP17L10C9JJH3 530 aa21.27■■□□□ 1
RNF40-203ENST00000493683 CYP2D6P10635 497 aa21.27■■□□□ 1
RNF40-203ENST00000493683 ARSEP51690 589 aa21.27■■□□□ 1
RNF40-203ENST00000493683 DUOXA2Q1HG44 320 aa21.27■■□□□ 1
RNF40-203ENST00000493683 RASGRP2Q7LDG7 609 aa21.27■■□□□ 1
RNF40-203ENST00000493683 LXNQ9BS40 222 aa21.27■■□□□ 1
RNF40-203ENST00000493683 PCSK1NQ9UHG2 260 aa21.27■■□□□ 1
RNF40-203ENST00000493683 KIF1BO60333 1816 aa21.27■■□□□ 1
RNF40-203ENST00000493683 SPAG6O75602 509 aa21.27■□□□□ 0.99
RNF40-203ENST00000493683 ARMC2Q8NEN0 867 aa21.27■□□□□ 0.99
RNF40-203ENST00000493683 OTUB1Q96FW1 271 aaPredicted RBP21.27■□□□□ 0.99
RNF40-203ENST00000493683 CEP95Q96GE4 821 aa21.27■□□□□ 0.99
RNF40-203ENST00000493683 PPP1R2P1Q96PQ5 205 aa21.27■□□□□ 0.99
RNF40-203ENST00000493683 POLR3FQ9H1D9 316 aaPredicted RBP21.27■□□□□ 0.99
RNF40-203ENST00000493683 ROBO2Q9HCK4 1378 aa21.27■□□□□ 0.99
RNF40-203ENST00000493683 CDC42BPGQ6DT37 1551 aa21.27■□□□□ 0.99
RNF40-203ENST00000493683 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.26■□□□□ 0.99
RNF40-203ENST00000493683 ZC3H12BQ5HYM0 836 aaKnown RBP21.26■□□□□ 0.99
RNF40-203ENST00000493683 KCTD17Q8N5Z5 321 aa21.26■□□□□ 0.99
RNF40-203ENST00000493683 RANBP17Q9H2T7 1088 aaKnown RBP21.26■□□□□ 0.99
RNF40-203ENST00000493683 SP110Q9HB58 689 aa21.26■□□□□ 0.99
RNF40-203ENST00000493683 ABCF3Q9NUQ8 709 aa21.26■□□□□ 0.99
RNF40-203ENST00000493683 MINPP1Q9UNW1 487 aa21.26■□□□□ 0.99
RNF40-203ENST00000493683 ZNF335Q9H4Z2 1342 aaPredicted RBP21.26■□□□□ 0.99
RNF40-203ENST00000493683 LAMB3Q13751 1172 aa21.26■□□□□ 0.99
RNF40-203ENST00000493683 STK33Q9BYT3 514 aa21.26■□□□□ 0.99
RNF40-203ENST00000493683 RBAKQ9NYW8 714 aaPredicted RBP21.26■□□□□ 0.99
RNF40-203ENST00000493683 KCND2Q9NZV8 630 aa21.26■□□□□ 0.99
RNF40-203ENST00000493683 INPP5FQ9Y2H2 1132 aa21.26■□□□□ 0.99
RNF40-203ENST00000493683 EMSYQ7Z589 1322 aa21.26■□□□□ 0.99
RNF40-203ENST00000493683 UGGT1Q9NYU2 1555 aa21.26■□□□□ 0.99
RNF40-203ENST00000493683 POTEFA5A3E0 1075 aa21.26■□□□□ 0.99
RNF40-203ENST00000493683 POTEIP0CG38 1075 aa21.26■□□□□ 0.99
RNF40-203ENST00000493683 TTLL4Q14679 1199 aa21.26■□□□□ 0.99
RNF40-203ENST00000493683 UGP2Q16851 508 aa21.26■□□□□ 0.99
RNF40-203ENST00000493683 FAM102AQ5T9C2 384 aaPredicted RBP21.26■□□□□ 0.99
RNF40-203ENST00000493683 POTEGQ6S5H5 508 aa21.26■□□□□ 0.99
RNF40-203ENST00000493683 POTEEQ6S8J3 1075 aa21.26■□□□□ 0.99
RNF40-203ENST00000493683 NEDD1Q8NHV4 660 aa21.26■□□□□ 0.99
RNF40-203ENST00000493683 CCDC90BQ9GZT6 254 aa21.26■□□□□ 0.99
RNF40-203ENST00000493683 HNRNPRO43390 633 aaKnown RBP21.26■□□□□ 0.99
RNF40-203ENST00000493683 SRGNP10124 158 aa21.26■□□□□ 0.99
RNF40-203ENST00000493683 MXD4Q14582 209 aaPredicted RBP21.26■□□□□ 0.99
RNF40-203ENST00000493683 CMTM5Q96DZ9 223 aa21.26■□□□□ 0.99
RNF40-203ENST00000493683 EIF2AK1Q9BQI3 630 aaKnown RBP21.26■□□□□ 0.99
RNF40-203ENST00000493683 FBXO2Q9UK22 296 aaPredicted RBP21.26■□□□□ 0.99
RNF40-203ENST00000493683 ZNF197O14709 1029 aa21.25■□□□□ 0.99
RNF40-203ENST00000493683 TEX9Q8N6V9 391 aa21.25■□□□□ 0.99
RNF40-203ENST00000493683 KCNV2Q8TDN2 545 aa21.25■□□□□ 0.99
RNF40-203ENST00000493683 ASAP3Q8TDY4 903 aa21.25■□□□□ 0.99
RNF40-203ENST00000493683 ROPN1BQ9BZX4 212 aaPredicted RBP21.25■□□□□ 0.99
RNF40-203ENST00000493683 ROPN1Q9HAT0 212 aaPredicted RBP21.25■□□□□ 0.99
RNF40-203ENST00000493683 PKD2L2Q9NZM6 624 aa21.25■□□□□ 0.99
RNF40-203ENST00000493683 C16orf96A6NNT2 1141 aa21.25■□□□□ 0.99
RNF40-203ENST00000493683 CDH2P19022 906 aaPredicted RBP21.25■□□□□ 0.99
RNF40-203ENST00000493683 NNMTP40261 264 aa21.25■□□□□ 0.99
RNF40-203ENST00000493683 ACTR2P61160 394 aa21.25■□□□□ 0.99
RNF40-203ENST00000493683 ELMOD1Q8N336 334 aa21.25■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms