RNA–Protein interactions for RNA: ENST00000493682.6

COL9A1-210, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 5

Gene COL9A1, Length 1,117 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-210ENST00000493682 NBL1P41271 181 aa19.31■□□□□ 0.68
COL9A1-210ENST00000493682 DSG1Q02413 1049 aa19.31■□□□□ 0.68
COL9A1-210ENST00000493682 CALCRLQ16602 461 aa19.31■□□□□ 0.68
COL9A1-210ENST00000493682 ELMSAN1Q6PJG2 1045 aa19.31■□□□□ 0.68
COL9A1-210ENST00000493682 CYP26C1Q6V0L0 522 aa19.31■□□□□ 0.68
COL9A1-210ENST00000493682 ASCL5Q7RTU5 278 aa19.31■□□□□ 0.68
COL9A1-210ENST00000493682 GSTCDQ8NEC7 633 aa19.31■□□□□ 0.68
COL9A1-210ENST00000493682 COLEC11Q9BWP8 271 aa19.31■□□□□ 0.68
COL9A1-210ENST00000493682 NFKBIZQ9BYH8 718 aa19.31■□□□□ 0.68
COL9A1-210ENST00000493682 RHOBTB2Q9BYZ6 727 aa19.31■□□□□ 0.68
COL9A1-210ENST00000493682 TRIM6Q9C030 488 aaPredicted RBP19.31■□□□□ 0.68
COL9A1-210ENST00000493682 TTC12Q9H892 705 aaPredicted RBP19.31■□□□□ 0.68
COL9A1-210ENST00000493682 WDR6Q9NNW5 1121 aaKnown RBP19.31■□□□□ 0.68
COL9A1-210ENST00000493682 CHST7Q9NS84 486 aa19.31■□□□□ 0.68
COL9A1-210ENST00000493682 IGSF9Q9P2J2 1179 aa19.31■□□□□ 0.68
COL9A1-210ENST00000493682 DPP7Q9UHL4 492 aa19.31■□□□□ 0.68
COL9A1-210ENST00000493682 B4GALT5O43286 388 aa19.3■□□□□ 0.68
COL9A1-210ENST00000493682 RFPL2O75678 378 aa19.3■□□□□ 0.68
COL9A1-210ENST00000493682 SPATA31D3P0C874 917 aa19.3■□□□□ 0.68
COL9A1-210ENST00000493682 AKAP5P24588 427 aa19.3■□□□□ 0.68
COL9A1-210ENST00000493682 RARRES1P49788 294 aa19.3■□□□□ 0.68
COL9A1-210ENST00000493682 SPATA31D4Q6ZUB0 917 aa19.3■□□□□ 0.68
COL9A1-210ENST00000493682 HACE1Q8IYU2 909 aa19.3■□□□□ 0.68
COL9A1-210ENST00000493682 NECAB1Q8N987 351 aa19.3■□□□□ 0.68
COL9A1-210ENST00000493682 BRMS1Q9HCU9 246 aa19.3■□□□□ 0.68
COL9A1-210ENST00000493682 FBXL21Q9UKT6 434 aa19.3■□□□□ 0.68
COL9A1-210ENST00000493682 CLUHO75153 1309 aa19.29■□□□□ 0.68
COL9A1-210ENST00000493682 A0A087WWV3 80 aa19.29■□□□□ 0.68
COL9A1-210ENST00000493682 WNT7AO00755 349 aa19.29■□□□□ 0.68
COL9A1-210ENST00000493682 PI15O43692 258 aa19.29■□□□□ 0.68
COL9A1-210ENST00000493682 AOC1P19801 751 aa19.29■□□□□ 0.68
COL9A1-210ENST00000493682 GBP2P32456 591 aaPredicted RBP19.29■□□□□ 0.68
COL9A1-210ENST00000493682 ANKRD1Q15327 319 aa19.29■□□□□ 0.68
COL9A1-210ENST00000493682 SLC27A1Q6PCB7 646 aa19.29■□□□□ 0.68
COL9A1-210ENST00000493682 CDR2LQ86X02 465 aaPredicted RBP19.29■□□□□ 0.68
COL9A1-210ENST00000493682 PALB2Q86YC2 1186 aa19.29■□□□□ 0.68
COL9A1-210ENST00000493682 SIX5Q8N196 739 aa19.29■□□□□ 0.68
COL9A1-210ENST00000493682 PIGOQ8TEQ8 1089 aa19.29■□□□□ 0.68
COL9A1-210ENST00000493682 SMG7Q92540 1137 aaKnown RBP19.29■□□□□ 0.68
COL9A1-210ENST00000493682 B3GALT6Q96L58 329 aa19.29■□□□□ 0.68
COL9A1-210ENST00000493682 CCDC43Q96MW1 224 aaKnown RBP19.29■□□□□ 0.68
COL9A1-210ENST00000493682 GPR62Q9BZJ7 368 aa19.29■□□□□ 0.68
COL9A1-210ENST00000493682 POLR3FQ9H1D9 316 aaPredicted RBP19.29■□□□□ 0.68
COL9A1-210ENST00000493682 CFAP54Q96N23 3096 aa19.29■□□□□ 0.68
COL9A1-210ENST00000493682 A0A1B0GUA9 196 aa19.28■□□□□ 0.68
COL9A1-210ENST00000493682 PRR23AA6NEV1 266 aa19.28■□□□□ 0.68
COL9A1-210ENST00000493682 BTBD18B2RXH4 712 aa19.28■□□□□ 0.68
COL9A1-210ENST00000493682 NARSO43776 548 aaKnown RBP19.28■□□□□ 0.68
COL9A1-210ENST00000493682 NEMFO60524 1076 aa19.28■□□□□ 0.68
COL9A1-210ENST00000493682 PAPLNO95428 1278 aa19.28■□□□□ 0.68
COL9A1-210ENST00000493682 NPTXRO95502 500 aa19.28■□□□□ 0.68
COL9A1-210ENST00000493682 TXKP42681 527 aa19.28■□□□□ 0.68
COL9A1-210ENST00000493682 FUT10Q6P4F1 479 aa19.28■□□□□ 0.68
COL9A1-210ENST00000493682 HDAC7Q8WUI4 952 aa19.28■□□□□ 0.68
COL9A1-210ENST00000493682 RSAD2Q8WXG1 361 aa19.28■□□□□ 0.68
COL9A1-210ENST00000493682 RABGGTAQ92696 567 aa19.28■□□□□ 0.68
COL9A1-210ENST00000493682 STAMQ92783 540 aa19.28■□□□□ 0.68
COL9A1-210ENST00000493682 ZNF707Q96C28 371 aaPredicted RBP19.28■□□□□ 0.68
COL9A1-210ENST00000493682 MTMR9Q96QG7 549 aa19.28■□□□□ 0.68
COL9A1-210ENST00000493682 KLK14Q9P0G3 267 aa19.28■□□□□ 0.68
COL9A1-210ENST00000493682 EPS15L1Q9UBC2 864 aa19.28■□□□□ 0.68
COL9A1-210ENST00000493682 TGM5O43548 720 aa19.27■□□□□ 0.68
COL9A1-210ENST00000493682 LARGE1O95461 756 aa19.27■□□□□ 0.68
COL9A1-210ENST00000493682 C1RP00736 705 aa19.27■□□□□ 0.68
COL9A1-210ENST00000493682 XRCC6P12956 609 aaKnown RBP eCLIP19.27■□□□□ 0.68
COL9A1-210ENST00000493682 ANAPC15P60006 121 aa19.27■□□□□ 0.68
COL9A1-210ENST00000493682 GRIK3Q13003 919 aa19.27■□□□□ 0.68
COL9A1-210ENST00000493682 ME3Q16798 604 aa19.27■□□□□ 0.68
COL9A1-210ENST00000493682 USP41Q3LFD5 358 aa19.27■□□□□ 0.68
COL9A1-210ENST00000493682 FRMD5Q7Z6J6 570 aa19.27■□□□□ 0.68
COL9A1-210ENST00000493682 GTF3C6Q969F1 213 aa19.27■□□□□ 0.68
COL9A1-210ENST00000493682 MYADMQ96S97 322 aa19.27■□□□□ 0.68
COL9A1-210ENST00000493682 NT5C3AQ9H0P0 336 aa19.27■□□□□ 0.68
COL9A1-210ENST00000493682 PLEKHA4Q9H4M7 779 aa19.27■□□□□ 0.68
COL9A1-210ENST00000493682 GPRC5CQ9NQ84 441 aa19.27■□□□□ 0.68
COL9A1-210ENST00000493682 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP19.27■□□□□ 0.68
COL9A1-210ENST00000493682 FNIP2Q9P278 1114 aa19.27■□□□□ 0.68
COL9A1-210ENST00000493682 PARP2Q9UGN5 583 aa19.27■□□□□ 0.68
COL9A1-210ENST00000493682 ADAM28Q9UKQ2 775 aa19.27■□□□□ 0.68
COL9A1-210ENST00000493682 TDRD15B5MCY1 1934 aaKnown RBP19.27■□□□□ 0.67
COL9A1-210ENST00000493682 MYO15AQ9UKN7 3530 aa19.26■□□□□ 0.67
COL9A1-210ENST00000493682 USO1O60763 962 aaKnown RBP19.26■□□□□ 0.67
COL9A1-210ENST00000493682 LILRA6Q6PI73 481 aa19.26■□□□□ 0.67
COL9A1-210ENST00000493682 MAEAQ7L5Y9 396 aa19.26■□□□□ 0.67
COL9A1-210ENST00000493682 GLYCTKQ8IVS8 523 aa19.26■□□□□ 0.67
COL9A1-210ENST00000493682 DIS3L2Q8IYB7 885 aaKnown RBP19.26■□□□□ 0.67
COL9A1-210ENST00000493682 CCDC105Q8IYK2 499 aa19.26■□□□□ 0.67
COL9A1-210ENST00000493682 GPR65Q8IYL9 337 aa19.26■□□□□ 0.67
COL9A1-210ENST00000493682 NSUN7Q8NE18 718 aaKnown RBP19.26■□□□□ 0.67
COL9A1-210ENST00000493682 RIN2Q8WYP3 895 aaPredicted RBP19.26■□□□□ 0.67
COL9A1-210ENST00000493682 RTP3Q9BQQ7 232 aa19.26■□□□□ 0.67
COL9A1-210ENST00000493682 PIDD1Q9HB75 910 aa19.26■□□□□ 0.67
COL9A1-210ENST00000493682 CACNG4Q9UBN1 327 aa19.26■□□□□ 0.67
COL9A1-210ENST00000493682 WNT16Q9UBV4 365 aa19.26■□□□□ 0.67
COL9A1-210ENST00000493682 ZMYM2Q9UBW7 1377 aa19.26■□□□□ 0.67
COL9A1-210ENST00000493682 POTEMA6NI47 508 aa19.25■□□□□ 0.67
COL9A1-210ENST00000493682 LRRIQ4A6NIV6 560 aa19.25■□□□□ 0.67
COL9A1-210ENST00000493682 TADA2AO75478 443 aa19.25■□□□□ 0.67
COL9A1-210ENST00000493682 CFHP08603 1231 aa19.25■□□□□ 0.67
COL9A1-210ENST00000493682 SPATA31C1P0DKV0 1188 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms