RNA–Protein interactions for RNA: ENST00000493522.6

CTSA-209, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 901 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-209ENST00000493522 KCNG1Q9UIX4 513 aa12.74□□□□□ -0.37
CTSA-209ENST00000493522 ATG2AQ2TAZ0 1938 aa12.74□□□□□ -0.37
CTSA-209ENST00000493522 PLXNA4Q9HCM2 1894 aa12.74□□□□□ -0.37
CTSA-209ENST00000493522 K7ERI5 159 aa12.73□□□□□ -0.37
CTSA-209ENST00000493522 TRAK2O60296 914 aa12.73□□□□□ -0.37
CTSA-209ENST00000493522 EDN1P05305 212 aa12.73□□□□□ -0.37
CTSA-209ENST00000493522 SLFN14P0C7P3 912 aa12.73□□□□□ -0.37
CTSA-209ENST00000493522 CASP1P29466 404 aa12.73□□□□□ -0.37
CTSA-209ENST00000493522 AXLP30530 894 aa12.73□□□□□ -0.37
CTSA-209ENST00000493522 BMPR1AP36894 532 aa12.73□□□□□ -0.37
CTSA-209ENST00000493522 RAB27AP51159 221 aa12.73□□□□□ -0.37
CTSA-209ENST00000493522 NCKAP1LP55160 1127 aa12.73□□□□□ -0.37
CTSA-209ENST00000493522 STRN3Q13033 797 aa12.73□□□□□ -0.37
CTSA-209ENST00000493522 COASYQ13057 564 aa12.73□□□□□ -0.37
CTSA-209ENST00000493522 BTG3Q14201 252 aaPredicted RBP12.73□□□□□ -0.37
CTSA-209ENST00000493522 FAM187BQ17R55 369 aa12.73□□□□□ -0.37
CTSA-209ENST00000493522 CDR2LQ86X02 465 aaPredicted RBP12.73□□□□□ -0.37
CTSA-209ENST00000493522 ECHDC2Q86YB7 292 aa12.73□□□□□ -0.37
CTSA-209ENST00000493522 CCDC65Q8IXS2 484 aa12.73□□□□□ -0.37
CTSA-209ENST00000493522 TMEM87AQ8NBN3 555 aa12.73□□□□□ -0.37
CTSA-209ENST00000493522 CNNM3Q8NE01 707 aa12.73□□□□□ -0.37
CTSA-209ENST00000493522 CLP1Q92989 425 aaKnown RBP12.73□□□□□ -0.37
CTSA-209ENST00000493522 TRIM6Q9C030 488 aaPredicted RBP12.73□□□□□ -0.37
CTSA-209ENST00000493522 KCNH6Q9H252 994 aa12.73□□□□□ -0.37
CTSA-209ENST00000493522 FZD8Q9H461 694 aa12.73□□□□□ -0.37
CTSA-209ENST00000493522 TMEM134Q9H6X4 195 aa12.73□□□□□ -0.37
CTSA-209ENST00000493522 RC3H2Q9HBD1 1191 aaKnown RBP12.73□□□□□ -0.37
CTSA-209ENST00000493522 FAM105AQ9NUU6 356 aa12.73□□□□□ -0.37
CTSA-209ENST00000493522 PANK4Q9NVE7 773 aa12.73□□□□□ -0.37
CTSA-209ENST00000493522 TBC1D7Q9P0N9 293 aa12.73□□□□□ -0.37
CTSA-209ENST00000493522 USP20Q9Y2K6 914 aa12.73□□□□□ -0.37
CTSA-209ENST00000493522 PCDHB7Q9Y5E2 793 aa12.73□□□□□ -0.37
CTSA-209ENST00000493522 C19orf67A6NJJ6 358 aa12.72□□□□□ -0.37
CTSA-209ENST00000493522 ACKR2O00590 384 aa12.72□□□□□ -0.37
CTSA-209ENST00000493522 N4BP3O15049 544 aa12.72□□□□□ -0.37
CTSA-209ENST00000493522 GADD45BO75293 160 aaPredicted RBP12.72□□□□□ -0.37
CTSA-209ENST00000493522 NPTXRO95502 500 aa12.72□□□□□ -0.37
CTSA-209ENST00000493522 MAPTP10636 758 aaKnown RBP12.72□□□□□ -0.37
CTSA-209ENST00000493522 SKIP12755 728 aa12.72□□□□□ -0.37
CTSA-209ENST00000493522 NMT1P30419 496 aaKnown RBP12.72□□□□□ -0.37
CTSA-209ENST00000493522 HOXA11P31270 313 aaPredicted RBP12.72□□□□□ -0.37
CTSA-209ENST00000493522 GATMP50440 423 aa12.72□□□□□ -0.37
CTSA-209ENST00000493522 FAM160A1Q05DH4 1040 aa12.72□□□□□ -0.37
CTSA-209ENST00000493522 SMAD2Q15796 467 aaKnown RBP12.72□□□□□ -0.37
CTSA-209ENST00000493522 CTC1Q2NKJ3 1217 aa12.72□□□□□ -0.37
CTSA-209ENST00000493522 LONRF3Q496Y0 759 aa12.72□□□□□ -0.37
CTSA-209ENST00000493522 HERC4Q5GLZ8 1057 aaPredicted RBP12.72□□□□□ -0.37
CTSA-209ENST00000493522 KRBA2Q6ZNG9 492 aa12.72□□□□□ -0.37
CTSA-209ENST00000493522 TAS1R3Q7RTX0 852 aa12.72□□□□□ -0.37
CTSA-209ENST00000493522 HAUS6Q7Z4H7 955 aa12.72□□□□□ -0.37
CTSA-209ENST00000493522 ALYREFQ86V81 257 aaKnown RBP12.72□□□□□ -0.37
CTSA-209ENST00000493522 TMEM161BQ8NDZ6 487 aa12.72□□□□□ -0.37
CTSA-209ENST00000493522 PPP2R3CQ969Q6 453 aa12.72□□□□□ -0.37
CTSA-209ENST00000493522 BICD1Q96G01 975 aa12.72□□□□□ -0.37
CTSA-209ENST00000493522 PAGE5Q96GU1 130 aa12.72□□□□□ -0.37
CTSA-209ENST00000493522 CCDC34Q96HJ3 373 aa12.72□□□□□ -0.37
CTSA-209ENST00000493522 GBP4Q96PP9 640 aa12.72□□□□□ -0.37
CTSA-209ENST00000493522 C7orf25Q9BPX7 421 aa12.72□□□□□ -0.37
CTSA-209ENST00000493522 PLVAPQ9BX97 442 aa12.72□□□□□ -0.37
CTSA-209ENST00000493522 MRPL4Q9BYD3 311 aaKnown RBP12.72□□□□□ -0.37
CTSA-209ENST00000493522 PDZD7Q9H5P4 517 aa12.72□□□□□ -0.37
CTSA-209ENST00000493522 MRPL44Q9H9J2 332 aaKnown RBP12.72□□□□□ -0.37
CTSA-209ENST00000493522 TMEM161AQ9NX61 479 aa12.72□□□□□ -0.37
CTSA-209ENST00000493522 SEL1LQ9UBV2 794 aa12.72□□□□□ -0.37
CTSA-209ENST00000493522 PCDHB2Q9Y5E7 798 aa12.72□□□□□ -0.37
CTSA-209ENST00000493522 FRMD3A2A2Y4 597 aa12.71□□□□□ -0.37
CTSA-209ENST00000493522 TTLL13PA6NNM8 815 aa12.71□□□□□ -0.37
CTSA-209ENST00000493522 GRM6O15303 877 aa12.71□□□□□ -0.37
CTSA-209ENST00000493522 ZNF202O95125 648 aa12.71□□□□□ -0.37
CTSA-209ENST00000493522 GCNT3O95395 438 aa12.71□□□□□ -0.37
CTSA-209ENST00000493522 LINC00271P0C7V0 271 aa12.71□□□□□ -0.37
CTSA-209ENST00000493522 FGFR1P11362 822 aa12.71□□□□□ -0.37
CTSA-209ENST00000493522 IRS1P35568 1242 aa12.71□□□□□ -0.37
CTSA-209ENST00000493522 LTBRP36941 435 aa12.71□□□□□ -0.37
CTSA-209ENST00000493522 HYAL1Q12794 435 aa12.71□□□□□ -0.37
CTSA-209ENST00000493522 SMAD4Q13485 552 aaKnown RBP12.71□□□□□ -0.37
CTSA-209ENST00000493522 CUL4BQ13620 913 aa12.71□□□□□ -0.37
CTSA-209ENST00000493522 CLUL1Q15846 466 aa12.71□□□□□ -0.37
CTSA-209ENST00000493522 PAN2Q504Q3 1202 aaKnown RBP12.71□□□□□ -0.37
CTSA-209ENST00000493522 UBXN11Q5T124 520 aa12.71□□□□□ -0.37
CTSA-209ENST00000493522 NT5DC1Q5TFE4 455 aa12.71□□□□□ -0.37
CTSA-209ENST00000493522 ATF7IP2Q5U623 682 aa12.71□□□□□ -0.37
CTSA-209ENST00000493522 EEF1DP3Q658K8 133 aa12.71□□□□□ -0.37
CTSA-209ENST00000493522 SLC27A1Q6PCB7 646 aa12.71□□□□□ -0.37
CTSA-209ENST00000493522 UNC13DQ70J99 1090 aa12.71□□□□□ -0.37
CTSA-209ENST00000493522 LPPQ93052 612 aa12.71□□□□□ -0.37
CTSA-209ENST00000493522 ADPGKQ9BRR6 497 aa12.71□□□□□ -0.37
CTSA-209ENST00000493522 TARS2Q9BW92 718 aaKnown RBP12.71□□□□□ -0.37
CTSA-209ENST00000493522 APOL6Q9BWW8 343 aa12.71□□□□□ -0.37
CTSA-209ENST00000493522 EIF2AQ9BY44 585 aaKnown RBP12.71□□□□□ -0.37
CTSA-209ENST00000493522 ELAC1Q9H777 363 aaKnown RBP12.71□□□□□ -0.37
CTSA-209ENST00000493522 ANKFY1Q9P2R3 1169 aa12.71□□□□□ -0.37
CTSA-209ENST00000493522 MYO7AQ13402 2215 aa12.7□□□□□ -0.38
CTSA-209ENST00000493522 A0A0U1RQF3 1178 aa12.7□□□□□ -0.38
CTSA-209ENST00000493522 A0A1B0GUA9 196 aa12.7□□□□□ -0.38
CTSA-209ENST00000493522 HNRNPDLO14979 420 aaKnown RBP12.7□□□□□ -0.38
CTSA-209ENST00000493522 HOXA2O43364 376 aa12.7□□□□□ -0.38
CTSA-209ENST00000493522 MBTPS2O43462 519 aa12.7□□□□□ -0.38
CTSA-209ENST00000493522 KINO60870 393 aaKnown RBP12.7□□□□□ -0.38
CTSA-209ENST00000493522 DGKIO75912 1065 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms