RNA–Protein interactions for RNA: ENST00000493265.2

LIME1-208, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 2

Gene LIME1, Length 661 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-208ENST00000493265 RPUSD2Q8IZ73 545 aaKnown RBP18.8■□□□□ 0.6
LIME1-208ENST00000493265 PPM1EQ8WY54 764 aa18.8■□□□□ 0.6
LIME1-208ENST00000493265 POMGNT1Q8WZA1 660 aa18.8■□□□□ 0.6
LIME1-208ENST00000493265 DHTKD1Q96HY7 919 aaPredicted RBP18.8■□□□□ 0.6
LIME1-208ENST00000493265 ADPGKQ9BRR6 497 aa18.8■□□□□ 0.6
LIME1-208ENST00000493265 EIF2AQ9BY44 585 aaKnown RBP18.8■□□□□ 0.6
LIME1-208ENST00000493265 PBX4Q9BYU1 374 aa18.8■□□□□ 0.6
LIME1-208ENST00000493265 KCTD10Q9H3F6 313 aa18.8■□□□□ 0.6
LIME1-208ENST00000493265 DACH1Q9UI36 760 aa18.8■□□□□ 0.6
LIME1-208ENST00000493265 TNFSF13BQ9Y275 285 aa18.8■□□□□ 0.6
LIME1-208ENST00000493265 MYO9BQ13459 2157 aa18.8■□□□□ 0.6
LIME1-208ENST00000493265 TTC28Q96AY4 2481 aa18.8■□□□□ 0.6
LIME1-208ENST00000493265 A0A1B0GUA9 196 aa18.79■□□□□ 0.6
LIME1-208ENST00000493265 CLDN3O15551 220 aa18.79■□□□□ 0.6
LIME1-208ENST00000493265 TOM1L1O75674 476 aa18.79■□□□□ 0.6
LIME1-208ENST00000493265 PIGRP01833 764 aa18.79■□□□□ 0.6
LIME1-208ENST00000493265 PPP1R2P41236 205 aa18.79■□□□□ 0.6
LIME1-208ENST00000493265 CYP2J2P51589 502 aa18.79■□□□□ 0.6
LIME1-208ENST00000493265 PMS1P54277 932 aaKnown RBP18.79■□□□□ 0.6
LIME1-208ENST00000493265 PAK1Q13153 545 aa18.79■□□□□ 0.6
LIME1-208ENST00000493265 COBLL1Q53SF7 1204 aa18.79■□□□□ 0.6
LIME1-208ENST00000493265 ARMCX5Q6P1M9 558 aa18.79■□□□□ 0.6
LIME1-208ENST00000493265 CNKSR3Q6P9H4 555 aa18.79■□□□□ 0.6
LIME1-208ENST00000493265 SLC27A1Q6PCB7 646 aa18.79■□□□□ 0.6
LIME1-208ENST00000493265 ZNF365Q70YC5 407 aa18.79■□□□□ 0.6
LIME1-208ENST00000493265 RNF169Q8NCN4 708 aa18.79■□□□□ 0.6
LIME1-208ENST00000493265 APBB2Q92870 758 aa18.79■□□□□ 0.6
LIME1-208ENST00000493265 KCNN1Q92952 543 aa18.79■□□□□ 0.6
LIME1-208ENST00000493265 P2RX5Q93086 422 aa18.79■□□□□ 0.6
LIME1-208ENST00000493265 VWCEQ96DN2 955 aa18.79■□□□□ 0.6
LIME1-208ENST00000493265 TSG101Q99816 390 aa18.79■□□□□ 0.6
LIME1-208ENST00000493265 CBWD1Q9BRT8 395 aa18.79■□□□□ 0.6
LIME1-208ENST00000493265 MSTO1Q9BUK6 570 aa18.79■□□□□ 0.6
LIME1-208ENST00000493265 APOL6Q9BWW8 343 aa18.79■□□□□ 0.6
LIME1-208ENST00000493265 TRIM6Q9C030 488 aaPredicted RBP18.79■□□□□ 0.6
LIME1-208ENST00000493265 PRDM6Q9NQX0 595 aa18.79■□□□□ 0.6
LIME1-208ENST00000493265 CHST12Q9NRB3 414 aa18.79■□□□□ 0.6
LIME1-208ENST00000493265 AGPAT3Q9NRZ7 376 aa18.79■□□□□ 0.6
LIME1-208ENST00000493265 TYW1Q9NV66 732 aaKnown RBP18.79■□□□□ 0.6
LIME1-208ENST00000493265 PDXKO00764 312 aa18.78■□□□□ 0.6
LIME1-208ENST00000493265 CALUO43852 315 aaPredicted RBP18.78■□□□□ 0.6
LIME1-208ENST00000493265 CCNE1P24864 410 aa18.78■□□□□ 0.6
LIME1-208ENST00000493265 OSTNP61366 133 aa18.78■□□□□ 0.6
LIME1-208ENST00000493265 IKBKEQ14164 716 aa18.78■□□□□ 0.6
LIME1-208ENST00000493265 DSC3Q14574 896 aa18.78■□□□□ 0.6
LIME1-208ENST00000493265 NOLC1Q14978 699 aaKnown RBP eCLIP18.78■□□□□ 0.6
LIME1-208ENST00000493265 SEZ6Q53EL9 994 aa18.78■□□□□ 0.6
LIME1-208ENST00000493265 UBXN11Q5T124 520 aa18.78■□□□□ 0.6
LIME1-208ENST00000493265 ANKRD40Q6AI12 368 aa18.78■□□□□ 0.6
LIME1-208ENST00000493265 PSRC1Q6PGN9 363 aaPredicted RBP18.78■□□□□ 0.6
LIME1-208ENST00000493265 OTOP2Q7RTS6 562 aa18.78■□□□□ 0.6
LIME1-208ENST00000493265 RTN4RL1Q86UN2 441 aaPredicted RBP18.78■□□□□ 0.6
LIME1-208ENST00000493265 THNSL1Q8IYQ7 743 aa18.78■□□□□ 0.6
LIME1-208ENST00000493265 LINC01599Q8WXQ3 324 aa18.78■□□□□ 0.6
LIME1-208ENST00000493265 SAAL1Q96ER3 474 aa18.78■□□□□ 0.6
LIME1-208ENST00000493265 GAS2L1Q99501 681 aaPredicted RBP18.78■□□□□ 0.6
LIME1-208ENST00000493265 FTHL17Q9BXU8 183 aa18.78■□□□□ 0.6
LIME1-208ENST00000493265 HAPLN2Q9GZV7 340 aa18.78■□□□□ 0.6
LIME1-208ENST00000493265 CDT1Q9H211 546 aa18.78■□□□□ 0.6
LIME1-208ENST00000493265 PRDM12Q9H4Q4 367 aa18.78■□□□□ 0.6
LIME1-208ENST00000493265 GOLGA8IPA6NC78 632 aa18.77■□□□□ 0.6
LIME1-208ENST00000493265 GOLGA8JA6NMD2 632 aa18.77■□□□□ 0.6
LIME1-208ENST00000493265 ADSSP30520 456 aa18.77■□□□□ 0.6
LIME1-208ENST00000493265 RASIP1Q5U651 963 aa18.77■□□□□ 0.6
LIME1-208ENST00000493265 SLFN12LQ6IEE8 588 aa18.77■□□□□ 0.6
LIME1-208ENST00000493265 CENPPQ6IPU0 288 aa18.77■□□□□ 0.6
LIME1-208ENST00000493265 APBB1IPQ7Z5R6 666 aaPredicted RBP18.77■□□□□ 0.6
LIME1-208ENST00000493265 ZSWIM2Q8NEG5 633 aa18.77■□□□□ 0.6
LIME1-208ENST00000493265 GOLGA5Q8TBA6 731 aa18.77■□□□□ 0.6
LIME1-208ENST00000493265 EEF2KMTQ96G04 330 aa18.77■□□□□ 0.6
LIME1-208ENST00000493265 FUCA2Q9BTY2 467 aa18.77■□□□□ 0.6
LIME1-208ENST00000493265 PTPRHQ9HD43 1115 aa18.77■□□□□ 0.6
LIME1-208ENST00000493265 HES2Q9Y543 173 aa18.77■□□□□ 0.6
LIME1-208ENST00000493265 TET1Q8NFU7 2136 aa18.76■□□□□ 0.59
LIME1-208ENST00000493265 A0A0B4J269 797 aa18.76■□□□□ 0.59
LIME1-208ENST00000493265 BICDL2A1A5D9 508 aa18.76■□□□□ 0.59
LIME1-208ENST00000493265 ZBBXA8MT70 800 aa18.76■□□□□ 0.59
LIME1-208ENST00000493265 ENPP3O14638 875 aa18.76■□□□□ 0.59
LIME1-208ENST00000493265 ABLIM1O14639 778 aa18.76■□□□□ 0.59
LIME1-208ENST00000493265 FGBP02675 491 aa18.76■□□□□ 0.59
LIME1-208ENST00000493265 NR3C1P04150 777 aa18.76■□□□□ 0.59
LIME1-208ENST00000493265 PFKMP08237 780 aa18.76■□□□□ 0.59
LIME1-208ENST00000493265 ACTN1P12814 892 aa18.76■□□□□ 0.59
LIME1-208ENST00000493265 PROZP22891 400 aa18.76■□□□□ 0.59
LIME1-208ENST00000493265 MCL1Q07820 350 aa18.76■□□□□ 0.59
LIME1-208ENST00000493265 DCAF4L1Q3SXM0 396 aa18.76■□□□□ 0.59
LIME1-208ENST00000493265 TJAP1Q5JTD0 557 aa18.76■□□□□ 0.59
LIME1-208ENST00000493265 CEP120Q8N960 986 aa18.76■□□□□ 0.59
LIME1-208ENST00000493265 CCDC51Q96ER9 411 aa18.76■□□□□ 0.59
LIME1-208ENST00000493265 RGS18Q9NS28 235 aa18.76■□□□□ 0.59
LIME1-208ENST00000493265 FAM105AQ9NUU6 356 aa18.76■□□□□ 0.59
LIME1-208ENST00000493265 HSPBP1Q9NZL4 362 aa18.76■□□□□ 0.59
LIME1-208ENST00000493265 RWDD2AQ9UIY3 292 aa18.76■□□□□ 0.59
LIME1-208ENST00000493265 AGO2Q9UKV8 859 aaKnown RBP18.76■□□□□ 0.59
LIME1-208ENST00000493265 PCDHB2Q9Y5E7 798 aa18.76■□□□□ 0.59
LIME1-208ENST00000493265 MCF2P10911 925 aa18.75■□□□□ 0.59
LIME1-208ENST00000493265 GARTP22102 1010 aa18.75■□□□□ 0.59
LIME1-208ENST00000493265 ACOT2P49753 483 aa18.75■□□□□ 0.59
LIME1-208ENST00000493265 TPD52L1Q16890 204 aaPredicted RBP18.75■□□□□ 0.59
LIME1-208ENST00000493265 ZBTB41Q5SVQ8 909 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms