RNA–Protein interactions for RNA: ENST00000493232.5

BRAT1-206, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 2

Gene BRAT1, Length 5,360 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-206ENST00000493232 ATXN8OSP0DMR3 200 aa17.27■□□□□ 0.36
BRAT1-206ENST00000493232 HSD17B4P51659 736 aa17.27■□□□□ 0.36
BRAT1-206ENST00000493232 ZNF235Q14590 738 aa17.27■□□□□ 0.36
BRAT1-206ENST00000493232 TBC1D1Q86TI0 1168 aaPredicted RBP17.27■□□□□ 0.36
BRAT1-206ENST00000493232 TRIML2Q8N7C3 387 aa17.27■□□□□ 0.36
BRAT1-206ENST00000493232 MTBPQ96DY7 904 aa17.27■□□□□ 0.36
BRAT1-206ENST00000493232 KCND2Q9NZV8 630 aa17.27■□□□□ 0.36
BRAT1-206ENST00000493232 INTUQ9ULD6 942 aa17.27■□□□□ 0.36
BRAT1-206ENST00000493232 KDM6AO15550 1401 aaPredicted RBP17.27■□□□□ 0.36
BRAT1-206ENST00000493232 STXBP3O00186 592 aa17.27■□□□□ 0.36
BRAT1-206ENST00000493232 RTN2O75298 545 aa17.27■□□□□ 0.36
BRAT1-206ENST00000493232 TXNP10599 105 aaKnown RBP17.27■□□□□ 0.36
BRAT1-206ENST00000493232 DDX5P17844 614 aaKnown RBP17.27■□□□□ 0.36
BRAT1-206ENST00000493232 HADHAP40939 763 aa17.27■□□□□ 0.36
BRAT1-206ENST00000493232 CDH6P55285 790 aa17.27■□□□□ 0.36
BRAT1-206ENST00000493232 PPP2R2AP63151 447 aa17.27■□□□□ 0.36
BRAT1-206ENST00000493232 PDCLQ13371 301 aa17.27■□□□□ 0.36
BRAT1-206ENST00000493232 CAPRIN1Q14444 709 aaKnown RBP17.27■□□□□ 0.36
BRAT1-206ENST00000493232 NFRKBQ6P4R8 1299 aa17.27■□□□□ 0.36
BRAT1-206ENST00000493232 CCDC137Q6PK04 289 aaKnown RBP17.27■□□□□ 0.36
BRAT1-206ENST00000493232 GLYCTKQ8IVS8 523 aa17.27■□□□□ 0.36
BRAT1-206ENST00000493232 RNF149Q8NC42 400 aa17.27■□□□□ 0.36
BRAT1-206ENST00000493232 RUBCNQ92622 972 aa17.27■□□□□ 0.36
BRAT1-206ENST00000493232 CEP19Q96LK0 163 aa17.27■□□□□ 0.36
BRAT1-206ENST00000493232 SPON2Q9BUD6 331 aa17.27■□□□□ 0.36
BRAT1-206ENST00000493232 TEX13BQ9BXU2 312 aa17.27■□□□□ 0.36
BRAT1-206ENST00000493232 ANLNQ9NQW6 1124 aa17.27■□□□□ 0.36
BRAT1-206ENST00000493232 NOP53Q9NZM5 478 aaKnown RBP17.27■□□□□ 0.36
BRAT1-206ENST00000493232 CAPN11Q9UMQ6 739 aa17.27■□□□□ 0.36
BRAT1-206ENST00000493232 HNRNPCL2B2RXH8 293 aa17.27■□□□□ 0.36
BRAT1-206ENST00000493232 HNRNPCL1O60812 293 aaKnown RBP17.27■□□□□ 0.36
BRAT1-206ENST00000493232 MOCS2O96007 188 aaPredicted RBP17.27■□□□□ 0.36
BRAT1-206ENST00000493232 HMGCS2P54868 508 aa17.27■□□□□ 0.36
BRAT1-206ENST00000493232 DMTNQ08495 405 aa17.27■□□□□ 0.36
BRAT1-206ENST00000493232 SHC4Q6S5L8 630 aa17.27■□□□□ 0.36
BRAT1-206ENST00000493232 FAM47EQ6ZV65 393 aa17.27■□□□□ 0.36
BRAT1-206ENST00000493232 EGFL8Q99944 293 aa17.27■□□□□ 0.36
BRAT1-206ENST00000493232 WDR35Q9P2L0 1181 aa17.27■□□□□ 0.36
BRAT1-206ENST00000493232 TEKT2Q9UIF3 430 aa17.27■□□□□ 0.36
BRAT1-206ENST00000493232 ENTPD3O75355 529 aa17.27■□□□□ 0.35
BRAT1-206ENST00000493232 POU5F1BQ06416 359 aa17.27■□□□□ 0.35
BRAT1-206ENST00000493232 GJD4Q96KN9 370 aaPredicted RBP17.27■□□□□ 0.35
BRAT1-206ENST00000493232 MAGOHP61326 146 aaKnown RBP17.26■□□□□ 0.35
BRAT1-206ENST00000493232 ZNF543Q08ER8 600 aa17.26■□□□□ 0.35
BRAT1-206ENST00000493232 NUDT18Q6ZVK8 323 aa17.26■□□□□ 0.35
BRAT1-206ENST00000493232 SYDE1Q6ZW31 735 aaPredicted RBP17.26■□□□□ 0.35
BRAT1-206ENST00000493232 ZBED8Q8IZ13 594 aa17.26■□□□□ 0.35
BRAT1-206ENST00000493232 DDX47Q9H0S4 455 aaKnown RBP17.26■□□□□ 0.35
BRAT1-206ENST00000493232 MTMR4Q9NYA4 1195 aa17.26■□□□□ 0.35
BRAT1-206ENST00000493232 TBCCQ15814 346 aa17.26■□□□□ 0.35
BRAT1-206ENST00000493232 CYFIP1Q7L576 1253 aa17.26■□□□□ 0.35
BRAT1-206ENST00000493232 OR6J1Q8NGC5 347 aa17.26■□□□□ 0.35
BRAT1-206ENST00000493232 N4BP2L2Q92802 583 aaPredicted RBP17.26■□□□□ 0.35
BRAT1-206ENST00000493232 LRRC37BQ96QE4 947 aa17.26■□□□□ 0.35
BRAT1-206ENST00000493232 NYAP2Q9P242 653 aa17.26■□□□□ 0.35
BRAT1-206ENST00000493232 ARHGEF40Q8TER5 1519 aa17.26■□□□□ 0.35
BRAT1-206ENST00000493232 TNPO2O14787 897 aaKnown RBP17.26■□□□□ 0.35
BRAT1-206ENST00000493232 MRPS25P82663 173 aaKnown RBP17.26■□□□□ 0.35
BRAT1-206ENST00000493232 IZUMO3Q5VZ72 239 aa17.26■□□□□ 0.35
BRAT1-206ENST00000493232 CC2D1AQ6P1N0 951 aaPredicted RBP17.26■□□□□ 0.35
BRAT1-206ENST00000493232 STAG2Q8N3U4 1231 aa17.26■□□□□ 0.35
BRAT1-206ENST00000493232 TBC1D16Q8TBP0 767 aa17.26■□□□□ 0.35
BRAT1-206ENST00000493232 CENPKQ9BS16 269 aa17.26■□□□□ 0.35
BRAT1-206ENST00000493232 POLD4Q9HCU8 107 aa17.26■□□□□ 0.35
BRAT1-206ENST00000493232 SARS2Q9NP81 518 aaKnown RBP17.26■□□□□ 0.35
BRAT1-206ENST00000493232 BRAFP15056 766 aa17.26■□□□□ 0.35
BRAT1-206ENST00000493232 ZBTB17Q13105 803 aa17.26■□□□□ 0.35
BRAT1-206ENST00000493232 SZRD1Q7Z422 152 aa17.26■□□□□ 0.35
BRAT1-206ENST00000493232 ASAP3Q8TDY4 903 aa17.26■□□□□ 0.35
BRAT1-206ENST00000493232 GTF3C2Q8WUA4 911 aaPredicted RBP17.26■□□□□ 0.35
BRAT1-206ENST00000493232 LZICQ8WZA0 190 aa17.26■□□□□ 0.35
BRAT1-206ENST00000493232 KATNAL1Q9BW62 490 aa17.26■□□□□ 0.35
BRAT1-206ENST00000493232 DAGLAQ9Y4D2 1042 aa17.26■□□□□ 0.35
BRAT1-206ENST00000493232 EFTUD2Q15029 972 aaKnown RBP eCLIP17.25■□□□□ 0.351e-6■■■■■ 29.8
BRAT1-206ENST00000493232 SRBD1Q8N5C6 995 aaKnown RBP17.25■□□□□ 0.35
BRAT1-206ENST00000493232 ASPSCR1Q9BZE9 553 aa17.25■□□□□ 0.35
BRAT1-206ENST00000493232 PFDN1O60925 122 aa17.25■□□□□ 0.35
BRAT1-206ENST00000493232 LBRQ14739 615 aaKnown RBP17.25■□□□□ 0.35
BRAT1-206ENST00000493232 NBPF9Q3BBW0 867 aa17.25■□□□□ 0.35
BRAT1-206ENST00000493232 TJP2Q9UDY2 1190 aa17.25■□□□□ 0.35
BRAT1-206ENST00000493232 RBP5P82980 135 aa17.25■□□□□ 0.35
BRAT1-206ENST00000493232 MAPRE2Q15555 327 aa17.25■□□□□ 0.35
BRAT1-206ENST00000493232 AP1ARQ63HQ0 302 aa17.25■□□□□ 0.35
BRAT1-206ENST00000493232 NUDCD3Q8IVD9 361 aa17.25■□□□□ 0.35
BRAT1-206ENST00000493232 OR6P1Q8NGX9 317 aa17.25■□□□□ 0.35
BRAT1-206ENST00000493232 FBXO2Q9UK22 296 aaPredicted RBP17.25■□□□□ 0.35
BRAT1-206ENST00000493232 ZNF197O14709 1029 aa17.25■□□□□ 0.35
BRAT1-206ENST00000493232 NCK2O43639 380 aa17.25■□□□□ 0.35
BRAT1-206ENST00000493232 ARFIP2P53365 341 aa17.25■□□□□ 0.35
BRAT1-206ENST00000493232 MTMR2Q13614 643 aa17.25■□□□□ 0.35
BRAT1-206ENST00000493232 RAPGEF5Q92565 580 aa17.25■□□□□ 0.35
BRAT1-206ENST00000493232 PGBD4Q96DM1 585 aa17.25■□□□□ 0.35
BRAT1-206ENST00000493232 CYTH2Q99418 400 aa17.25■□□□□ 0.35
BRAT1-206ENST00000493232 SMARCAD1Q9H4L7 1026 aa17.25■□□□□ 0.35
BRAT1-206ENST00000493232 PLEKHA5Q9HAU0 1116 aa17.25■□□□□ 0.35
BRAT1-206ENST00000493232 SENP1Q9P0U3 644 aa17.25■□□□□ 0.35
BRAT1-206ENST00000493232 FRMD3A2A2Y4 597 aa17.25■□□□□ 0.35
BRAT1-206ENST00000493232 PSMD3O43242 534 aa17.25■□□□□ 0.35
BRAT1-206ENST00000493232 SF3B3Q15393 1217 aaKnown RBP17.25■□□□□ 0.35
BRAT1-206ENST00000493232 ACCSLQ4AC99 568 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms