RNA–Protein interactions for RNA: ENST00000493039.5

CSTF1-206, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 5

Gene CSTF1, Length 2,234 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-206ENST00000493039 ALPK3Q96L96 1907 aa10.25□□□□□ -0.77
CSTF1-206ENST00000493039 A0A0B4J269 797 aa10.25□□□□□ -0.77
CSTF1-206ENST00000493039 CXCL10P02778 98 aa10.25□□□□□ -0.77
CSTF1-206ENST00000493039 ZNF165P49910 485 aa10.25□□□□□ -0.77
CSTF1-206ENST00000493039 NFX1Q12986 1120 aaKnown RBP10.25□□□□□ -0.77
CSTF1-206ENST00000493039 DSC3Q14574 896 aa10.25□□□□□ -0.77
CSTF1-206ENST00000493039 CT47A1Q5JQC4 288 aaPredicted RBP10.25□□□□□ -0.77
CSTF1-206ENST00000493039 ZBTB41Q5SVQ8 909 aa10.25□□□□□ -0.77
CSTF1-206ENST00000493039 UBXN11Q5T124 520 aa10.25□□□□□ -0.77
CSTF1-206ENST00000493039 ATF7IP2Q5U623 682 aa10.25□□□□□ -0.77
CSTF1-206ENST00000493039 LRRC55Q6ZSA7 311 aa10.25□□□□□ -0.77
CSTF1-206ENST00000493039 SYCP3Q8IZU3 236 aa10.25□□□□□ -0.77
CSTF1-206ENST00000493039 BORCS6Q96GS4 357 aa10.25□□□□□ -0.77
CSTF1-206ENST00000493039 CBX8Q9HC52 389 aa10.25□□□□□ -0.77
CSTF1-206ENST00000493039 MEFVO15553 781 aaPredicted RBP10.24□□□□□ -0.77
CSTF1-206ENST00000493039 TOM1L1O75674 476 aa10.24□□□□□ -0.77
CSTF1-206ENST00000493039 SFPQP23246 707 aaKnown RBP eCLIP10.24□□□□□ -0.77
CSTF1-206ENST00000493039 ABCD1P33897 745 aa10.24□□□□□ -0.77
CSTF1-206ENST00000493039 CASP4P49662 377 aa10.24□□□□□ -0.77
CSTF1-206ENST00000493039 GSE1Q14687 1217 aa10.24□□□□□ -0.77
CSTF1-206ENST00000493039 PCBP1Q15365 356 aaKnown RBP eCLIP10.24□□□□□ -0.77
CSTF1-206ENST00000493039 PLEKHG4Q58EX7 1191 aa10.24□□□□□ -0.77
CSTF1-206ENST00000493039 FOXR2Q6PJQ5 311 aa10.24□□□□□ -0.77
CSTF1-206ENST00000493039 CRELD2Q6UXH1 353 aaPredicted RBP10.24□□□□□ -0.77
CSTF1-206ENST00000493039 CCDC155Q8N6L0 562 aa10.24□□□□□ -0.77
CSTF1-206ENST00000493039 USP38Q8NB14 1042 aa10.24□□□□□ -0.77
CSTF1-206ENST00000493039 DBF4BQ8NFT6 615 aa10.24□□□□□ -0.77
CSTF1-206ENST00000493039 ENOX1Q8TC92 643 aaKnown RBP10.24□□□□□ -0.77
CSTF1-206ENST00000493039 LINC01599Q8WXQ3 324 aa10.24□□□□□ -0.77
CSTF1-206ENST00000493039 BPIFA3Q9BQP9 254 aa10.24□□□□□ -0.77
CSTF1-206ENST00000493039 EIF2AQ9BY44 585 aaKnown RBP10.24□□□□□ -0.77
CSTF1-206ENST00000493039 TSPY26PQ9H489 355 aa10.24□□□□□ -0.77
CSTF1-206ENST00000493039 PCIF1Q9H4Z3 704 aa10.24□□□□□ -0.77
CSTF1-206ENST00000493039 PRDM5Q9NQX1 630 aaPredicted RBP10.24□□□□□ -0.77
CSTF1-206ENST00000493039 GPR182O15218 404 aa10.23□□□□□ -0.77
CSTF1-206ENST00000493039 ERLIN2O94905 339 aa10.23□□□□□ -0.77
CSTF1-206ENST00000493039 NR3C1P04150 777 aa10.23□□□□□ -0.77
CSTF1-206ENST00000493039 CSF2RAP15509 400 aa10.23□□□□□ -0.77
CSTF1-206ENST00000493039 PPP1R2P41236 205 aa10.23□□□□□ -0.77
CSTF1-206ENST00000493039 LIG4P49917 911 aa10.23□□□□□ -0.77
CSTF1-206ENST00000493039 LRRC63Q05C16 580 aa10.23□□□□□ -0.77
CSTF1-206ENST00000493039 MCL1Q07820 350 aa10.23□□□□□ -0.77
CSTF1-206ENST00000493039 STIM1Q13586 685 aa10.23□□□□□ -0.77
CSTF1-206ENST00000493039 NFIL3Q16649 462 aa10.23□□□□□ -0.77
CSTF1-206ENST00000493039 EDRF1Q3B7T1 1238 aa10.23□□□□□ -0.77
CSTF1-206ENST00000493039 SEZ6Q53EL9 994 aa10.23□□□□□ -0.77
CSTF1-206ENST00000493039 C16orf59Q7L2K0 433 aa10.23□□□□□ -0.77
CSTF1-206ENST00000493039 LUZP1Q86V48 1076 aa10.23□□□□□ -0.77
CSTF1-206ENST00000493039 SLC9A9Q8IVB4 645 aa10.23□□□□□ -0.77
CSTF1-206ENST00000493039 C12orf56Q8IXR9 622 aa10.23□□□□□ -0.77
CSTF1-206ENST00000493039 TMEM192Q8IY95 271 aa10.23□□□□□ -0.77
CSTF1-206ENST00000493039 C7orf61Q8IZ16 206 aa10.23□□□□□ -0.77
CSTF1-206ENST00000493039 IFIH1Q9BYX4 1025 aaKnown RBP10.23□□□□□ -0.77
CSTF1-206ENST00000493039 RBSNQ9H1K0 784 aa10.23□□□□□ -0.77
CSTF1-206ENST00000493039 CDT1Q9H211 546 aa10.23□□□□□ -0.77
CSTF1-206ENST00000493039 RRAGDQ9NQL2 400 aaPredicted RBP10.23□□□□□ -0.77
CSTF1-206ENST00000493039 SAMSN1Q9NSI8 373 aaKnown RBP10.23□□□□□ -0.77
CSTF1-206ENST00000493039 EXOC7Q9UPT5 735 aa10.23□□□□□ -0.77
CSTF1-206ENST00000493039 PIN4Q9Y237 131 aaKnown RBP10.23□□□□□ -0.77
CSTF1-206ENST00000493039 NUB1Q9Y5A7 615 aa10.23□□□□□ -0.77
CSTF1-206ENST00000493039 CLDN3O15551 220 aa10.23□□□□□ -0.77
CSTF1-206ENST00000493039 AKAP3O75969 853 aa10.23□□□□□ -0.77
CSTF1-206ENST00000493039 PAK2Q13177 524 aa10.23□□□□□ -0.77
CSTF1-206ENST00000493039 ADAM9Q13443 819 aa10.23□□□□□ -0.77
CSTF1-206ENST00000493039 MFSD5Q6N075 450 aa10.23□□□□□ -0.77
CSTF1-206ENST00000493039 MPZL3Q6UWV2 235 aa10.23□□□□□ -0.77
CSTF1-206ENST00000493039 ZBTB33Q86T24 672 aa10.23□□□□□ -0.77
CSTF1-206ENST00000493039 AOPEPQ8N6M6 819 aa10.23□□□□□ -0.77
CSTF1-206ENST00000493039 BICD1Q96G01 975 aa10.23□□□□□ -0.77
CSTF1-206ENST00000493039 FBXL18Q96ME1 805 aa10.23□□□□□ -0.77
CSTF1-206ENST00000493039 SRRTQ9BXP5 876 aaKnown RBP10.23□□□□□ -0.77
CSTF1-206ENST00000493039 CXCL16Q9H2A7 254 aa10.23□□□□□ -0.77
CSTF1-206ENST00000493039 FANCLQ9NW38 375 aa10.23□□□□□ -0.77
CSTF1-206ENST00000493039 HSPBP1Q9NZL4 362 aa10.23□□□□□ -0.77
CSTF1-206ENST00000493039 ANKFY1Q9P2R3 1169 aa10.23□□□□□ -0.77
CSTF1-206ENST00000493039 NFE2L3Q9Y4A8 694 aa10.23□□□□□ -0.77
CSTF1-206ENST00000493039 RAG1P15918 1043 aa10.22□□□□□ -0.77
CSTF1-206ENST00000493039 SYN1P17600 705 aa10.22□□□□□ -0.77
CSTF1-206ENST00000493039 GARTP22102 1010 aa10.22□□□□□ -0.77
CSTF1-206ENST00000493039 NR2F2P24468 414 aa10.22□□□□□ -0.77
CSTF1-206ENST00000493039 AXLP30530 894 aa10.22□□□□□ -0.77
CSTF1-206ENST00000493039 EPHB4P54760 987 aa10.22□□□□□ -0.77
CSTF1-206ENST00000493039 WNT7BP56706 349 aa10.22□□□□□ -0.77
CSTF1-206ENST00000493039 SNRPFP62306 86 aaKnown RBP10.22□□□□□ -0.77
CSTF1-206ENST00000493039 FKBP3Q00688 224 aaKnown RBP10.22□□□□□ -0.77
CSTF1-206ENST00000493039 SPATA1Q5VX52 437 aa10.22□□□□□ -0.77
CSTF1-206ENST00000493039 NOTUMQ6P988 496 aa10.22□□□□□ -0.77
CSTF1-206ENST00000493039 HS2ST1Q7LGA3 356 aa10.22□□□□□ -0.77
CSTF1-206ENST00000493039 DEFB128Q7Z7B8 93 aa10.22□□□□□ -0.77
CSTF1-206ENST00000493039 SMG8Q8ND04 991 aaKnown RBP10.22□□□□□ -0.77
CSTF1-206ENST00000493039 RNF214Q8ND24 703 aa10.22□□□□□ -0.77
CSTF1-206ENST00000493039 FAM200AQ8TCP9 573 aa10.22□□□□□ -0.77
CSTF1-206ENST00000493039 POMGNT1Q8WZA1 660 aa10.22□□□□□ -0.77
CSTF1-206ENST00000493039 SAAL1Q96ER3 474 aa10.22□□□□□ -0.77
CSTF1-206ENST00000493039 RNF39Q9H2S5 420 aa10.22□□□□□ -0.77
CSTF1-206ENST00000493039 DACH1Q9UI36 760 aa10.22□□□□□ -0.77
CSTF1-206ENST00000493039 HES2Q9Y543 173 aa10.22□□□□□ -0.77
CSTF1-206ENST00000493039 SCN5AQ14524 2016 aa10.22□□□□□ -0.77
CSTF1-206ENST00000493039 GOLGA8IPA6NC78 632 aa10.22□□□□□ -0.77
CSTF1-206ENST00000493039 GOLGA8JA6NMD2 632 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms