RNA–Protein interactions for RNA: ENST00000493026.2

PSMD11-205, Transcript of proteasome 26S subunit, non-ATPase 11, human

TSL 2

Gene PSMD11, Length 2,387 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMD11-205	ENST00000493026	C12orf56	Q8IXR9	622 aa		13.74	□□□□□ -0.21
PSMD11-205	ENST00000493026	WDR18	Q9BV38	432 aa		13.74	□□□□□ -0.21
PSMD11-205	ENST00000493026	DEFB129	Q9H1M3	183 aa		13.74	□□□□□ -0.21
PSMD11-205	ENST00000493026	CNOT10	Q9H9A5	744 aa	Known RBP	13.74	□□□□□ -0.21
PSMD11-205	ENST00000493026	USP20	Q9Y2K6	914 aa		13.74	□□□□□ -0.21
PSMD11-205	ENST00000493026	NRXN2	Q9P2S2	1712 aa		13.74	□□□□□ -0.21
PSMD11-205	ENST00000493026	TTI1	O43156	1089 aa		13.74	□□□□□ -0.21
PSMD11-205	ENST00000493026	GH2	P01242	217 aa		13.74	□□□□□ -0.21
PSMD11-205	ENST00000493026	VIL1	P09327	827 aa	Known RBP	13.74	□□□□□ -0.21
PSMD11-205	ENST00000493026	CACNB3	P54284	484 aa		13.74	□□□□□ -0.21
PSMD11-205	ENST00000493026	SNRPF	P62306	86 aa	Known RBP	13.74	□□□□□ -0.21
PSMD11-205	ENST00000493026	BFSP1	Q12934	665 aa		13.74	□□□□□ -0.21
PSMD11-205	ENST00000493026	PLCB4	Q15147	1175 aa		13.74	□□□□□ -0.21
PSMD11-205	ENST00000493026	DUPD1	Q68J44	220 aa		13.74	□□□□□ -0.21
PSMD11-205	ENST00000493026	INTS8	Q75QN2	995 aa	Known RBP	13.74	□□□□□ -0.21
PSMD11-205	ENST00000493026	RIT2	Q99578	217 aa		13.74	□□□□□ -0.21
PSMD11-205	ENST00000493026	ERP44	Q9BS26	406 aa		13.74	□□□□□ -0.21
PSMD11-205	ENST00000493026	NEUROG2	Q9H2A3	272 aa		13.74	□□□□□ -0.21
PSMD11-205	ENST00000493026	CXXC1	Q9P0U4	656 aa	Predicted RBP	13.74	□□□□□ -0.21
PSMD11-205	ENST00000493026	SAMM50	Q9Y512	469 aa		13.74	□□□□□ -0.21
PSMD11-205	ENST00000493026	ANKRD31	Q8N7Z5	1873 aa		13.73	□□□□□ -0.21
PSMD11-205	ENST00000493026	GMNC	A6NCL1	334 aa		13.73	□□□□□ -0.21
PSMD11-205	ENST00000493026	SFI1	A8K8P3	1242 aa		13.73	□□□□□ -0.21
PSMD11-205	ENST00000493026	KIF3C	O14782	793 aa		13.73	□□□□□ -0.21
PSMD11-205	ENST00000493026	MAPK13	O15264	365 aa		13.73	□□□□□ -0.21
PSMD11-205	ENST00000493026	TRAPPC3	O43617	180 aa		13.73	□□□□□ -0.21
PSMD11-205	ENST00000493026	GGPS1	O95749	300 aa		13.73	□□□□□ -0.21
PSMD11-205	ENST00000493026	LIG3	P49916	1009 aa		13.73	□□□□□ -0.21
PSMD11-205	ENST00000493026	RBM5	P52756	815 aa	Known RBP eCLIP	13.73	□□□□□ -0.21
PSMD11-205	ENST00000493026	SNAP25	P60880	206 aa		13.73	□□□□□ -0.21
PSMD11-205	ENST00000493026	PPP2R2A	P63151	447 aa		13.73	□□□□□ -0.21
PSMD11-205	ENST00000493026	CBWD6	Q4V339	395 aa		13.73	□□□□□ -0.21
PSMD11-205	ENST00000493026	ZC2HC1C	Q53FD0	456 aa	Predicted RBP	13.73	□□□□□ -0.21
PSMD11-205	ENST00000493026	CBWD3	Q5JTY5	395 aa		13.73	□□□□□ -0.21
PSMD11-205	ENST00000493026	CBWD5	Q5RIA9	395 aa		13.73	□□□□□ -0.21
PSMD11-205	ENST00000493026	DDX42	Q86XP3	938 aa	Known RBP eCLIP	13.73	□□□□□ -0.21
PSMD11-205	ENST00000493026	FMO2	Q99518	471 aa		13.73	□□□□□ -0.21
PSMD11-205	ENST00000493026	TMEM206	Q9H813	350 aa		13.73	□□□□□ -0.21
PSMD11-205	ENST00000493026	ARHGEF10L	Q9HCE6	1279 aa		13.73	□□□□□ -0.21
PSMD11-205	ENST00000493026	PPP1R9A	Q9ULJ8	1098 aa		13.73	□□□□□ -0.21
PSMD11-205	ENST00000493026	TMX2	Q9Y320	296 aa		13.73	□□□□□ -0.21
PSMD11-205	ENST00000493026	MRPL11	Q9Y3B7	192 aa	Known RBP	13.73	□□□□□ -0.21
PSMD11-205	ENST00000493026	ADAMTSL1	Q8N6G6	1762 aa		13.73	□□□□□ -0.21
PSMD11-205	ENST00000493026	GDF11	O95390	407 aa		13.73	□□□□□ -0.21
PSMD11-205	ENST00000493026	NUDT17	P0C025	328 aa		13.73	□□□□□ -0.21
PSMD11-205	ENST00000493026	POLD1	P28340	1107 aa		13.73	□□□□□ -0.21
PSMD11-205	ENST00000493026	DR1	Q01658	176 aa		13.73	□□□□□ -0.21
PSMD11-205	ENST00000493026	DHX9	Q08211	1270 aa	Known RBP	13.73	□□□□□ -0.21
PSMD11-205	ENST00000493026	C6orf89	Q6UWU4	347 aa		13.73	□□□□□ -0.21
PSMD11-205	ENST00000493026	LMO3	Q8TAP4	145 aa		13.73	□□□□□ -0.21
PSMD11-205	ENST00000493026	CHURC1	Q8WUH1	139 aa		13.73	□□□□□ -0.21
PSMD11-205	ENST00000493026	UBLCP1	Q8WVY7	318 aa	Predicted RBP	13.73	□□□□□ -0.21
PSMD11-205	ENST00000493026	CENPT	Q96BT3	561 aa		13.73	□□□□□ -0.21
PSMD11-205	ENST00000493026	SRPK1	Q96SB4	655 aa	Known RBP	13.73	□□□□□ -0.21
PSMD11-205	ENST00000493026	FAM129A	Q9BZQ8	928 aa		13.73	□□□□□ -0.21
PSMD11-205	ENST00000493026	OSGEP	Q9NPF4	335 aa		13.73	□□□□□ -0.21
PSMD11-205	ENST00000493026	SYNGAP1	Q96PV0	1343 aa		13.73	□□□□□ -0.21
PSMD11-205	ENST00000493026		A0A1W2PRG0	241 aa		13.72	□□□□□ -0.21
PSMD11-205	ENST00000493026	MTA2	O94776	668 aa		13.72	□□□□□ -0.21
PSMD11-205	ENST00000493026	KRT13	P13646	458 aa		13.72	□□□□□ -0.21
PSMD11-205	ENST00000493026	CDKN1C	P49918	316 aa	Predicted RBP	13.72	□□□□□ -0.21
PSMD11-205	ENST00000493026	HOOK3	Q86VS8	718 aa		13.72	□□□□□ -0.21
PSMD11-205	ENST00000493026	PRPF38A	Q8NAV1	312 aa	Known RBP	13.72	□□□□□ -0.21
PSMD11-205	ENST00000493026	AGPAT1	Q99943	283 aa		13.72	□□□□□ -0.21
PSMD11-205	ENST00000493026	RANBP17	Q9H2T7	1088 aa	Known RBP	13.72	□□□□□ -0.21
PSMD11-205	ENST00000493026	QTRT2	Q9H974	415 aa	Known RBP	13.72	□□□□□ -0.21
PSMD11-205	ENST00000493026	DBNDD1	Q9H9R9	158 aa		13.72	□□□□□ -0.21
PSMD11-205	ENST00000493026	RASAL2	Q9UJF2	1139 aa		13.72	□□□□□ -0.21
PSMD11-205	ENST00000493026	FAM221B	A6H8Z2	402 aa		13.72	□□□□□ -0.21
PSMD11-205	ENST00000493026	C5orf60	A6NFR6	353 aa		13.72	□□□□□ -0.21
PSMD11-205	ENST00000493026	EXOC3	O60645	756 aa		13.72	□□□□□ -0.21
PSMD11-205	ENST00000493026	CHRNA3	P32297	505 aa		13.72	□□□□□ -0.21
PSMD11-205	ENST00000493026	FNTA	P49354	379 aa		13.72	□□□□□ -0.21
PSMD11-205	ENST00000493026	DCAF12L1	Q5VU92	463 aa		13.72	□□□□□ -0.21
PSMD11-205	ENST00000493026	UBL4B	Q8N7F7	174 aa		13.72	□□□□□ -0.21
PSMD11-205	ENST00000493026	ATP8B4	Q8TF62	1192 aa		13.72	□□□□□ -0.21
PSMD11-205	ENST00000493026	P3H4	Q92791	437 aa		13.72	□□□□□ -0.21
PSMD11-205	ENST00000493026	SCYL1	Q96KG9	808 aa		13.72	□□□□□ -0.21
PSMD11-205	ENST00000493026	RUNDC3B	Q96NL0	473 aa		13.72	□□□□□ -0.21
PSMD11-205	ENST00000493026	BCAS3	Q9H6U6	928 aa		13.72	□□□□□ -0.21
PSMD11-205	ENST00000493026	METTL5	Q9NRN9	209 aa	Known RBP	13.72	□□□□□ -0.21
PSMD11-205	ENST00000493026	ZDHHC18	Q9NUE0	388 aa		13.72	□□□□□ -0.21
PSMD11-205	ENST00000493026	TRPC5	Q9UL62	973 aa	Predicted RBP	13.72	□□□□□ -0.21
PSMD11-205	ENST00000493026	ARHGEF35	A5YM69	484 aa		13.71	□□□□□ -0.21
PSMD11-205	ENST00000493026		E7EVH7	732 aa		13.71	□□□□□ -0.21
PSMD11-205	ENST00000493026	PODXL	O00592	558 aa		13.71	□□□□□ -0.21
PSMD11-205	ENST00000493026	TREH	O43280	583 aa		13.71	□□□□□ -0.21
PSMD11-205	ENST00000493026	CFB	P00751	764 aa		13.71	□□□□□ -0.21
PSMD11-205	ENST00000493026	VCAM1	P19320	739 aa		13.71	□□□□□ -0.21
PSMD11-205	ENST00000493026	HPD	P32754	393 aa	Predicted RBP	13.71	□□□□□ -0.21
PSMD11-205	ENST00000493026	MAPK7	Q13164	816 aa		13.71	□□□□□ -0.21
PSMD11-205	ENST00000493026	SERINC3	Q13530	473 aa		13.71	□□□□□ -0.21
PSMD11-205	ENST00000493026	BYSL	Q13895	437 aa	Known RBP	13.71	□□□□□ -0.21
PSMD11-205	ENST00000493026	SWI5	Q1ZZU3	235 aa		13.71	□□□□□ -0.21
PSMD11-205	ENST00000493026	TLCD1	Q96CP7	247 aa		13.71	□□□□□ -0.21
PSMD11-205	ENST00000493026	PGM2	Q96G03	612 aa		13.71	□□□□□ -0.21
PSMD11-205	ENST00000493026	CEP89	Q96ST8	783 aa		13.71	□□□□□ -0.21
PSMD11-205	ENST00000493026	ZNF577	Q9BSK1	485 aa		13.71	□□□□□ -0.21
PSMD11-205	ENST00000493026	TEKT3	Q9BXF9	490 aa		13.71	□□□□□ -0.21
PSMD11-205	ENST00000493026	RABEP2	Q9H5N1	569 aa		13.71	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms