RNA–Protein interactions for RNA: ENST00000492977.5

PTPN7-216, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 1 (best)

Gene PTPN7, Length 1,595 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-216ENST00000492977 CDCA2Q69YH5 1023 aaPredicted RBP15.21■□□□□ 0.03
PTPN7-216ENST00000492977 ZPBP2Q6X784 338 aa15.21■□□□□ 0.03
PTPN7-216ENST00000492977 SRGAP1Q7Z6B7 1085 aa15.21■□□□□ 0.03
PTPN7-216ENST00000492977 MSL3Q8N5Y2 521 aaKnown RBP15.21■□□□□ 0.03
PTPN7-216ENST00000492977 MAML3Q96JK9 1138 aa15.21■□□□□ 0.03
PTPN7-216ENST00000492977 NOX5Q96PH1 765 aa15.21■□□□□ 0.03
PTPN7-216ENST00000492977 MAP7D2Q96T17 732 aa15.21■□□□□ 0.03
PTPN7-216ENST00000492977 C2orf40Q9H1Z8 148 aa15.21■□□□□ 0.03
PTPN7-216ENST00000492977 SUGCTQ9HAC7 445 aa15.21■□□□□ 0.03
PTPN7-216ENST00000492977 UBE2TQ9NPD8 197 aaPredicted RBP15.21■□□□□ 0.03
PTPN7-216ENST00000492977 NMRK2Q9NPI5 230 aa15.21■□□□□ 0.03
PTPN7-216ENST00000492977 NAGPAQ9UK23 515 aa15.21■□□□□ 0.03
PTPN7-216ENST00000492977 TRPC6Q9Y210 931 aa15.21■□□□□ 0.03
PTPN7-216ENST00000492977 SAR1BQ9Y6B6 198 aa15.21■□□□□ 0.03
PTPN7-216ENST00000492977 A0A0B4J269 797 aa15.2■□□□□ 0.02
PTPN7-216ENST00000492977 MANSC4A6NHS7 340 aaPredicted RBP15.2■□□□□ 0.02
PTPN7-216ENST00000492977 ASAP2O43150 1006 aa15.2■□□□□ 0.02
PTPN7-216ENST00000492977 MAP2K1Q02750 393 aaPredicted RBP15.2■□□□□ 0.02
PTPN7-216ENST00000492977 DRP2Q13474 957 aa15.2■□□□□ 0.02
PTPN7-216ENST00000492977 KIF22Q14807 665 aa15.2■□□□□ 0.02
PTPN7-216ENST00000492977 ELF2Q15723 593 aa15.2■□□□□ 0.02
PTPN7-216ENST00000492977 KIAA0753Q2KHM9 967 aa15.2■□□□□ 0.02
PTPN7-216ENST00000492977 ALKBH5Q6P6C2 394 aaKnown RBP15.2■□□□□ 0.02
PTPN7-216ENST00000492977 ZBTB8OSQ8IWT0 167 aa15.2■□□□□ 0.02
PTPN7-216ENST00000492977 FBXL13Q8NEE6 735 aa15.2■□□□□ 0.02
PTPN7-216ENST00000492977 FBXO22Q8NEZ5 403 aa15.2■□□□□ 0.02
PTPN7-216ENST00000492977 TARS2Q9BW92 718 aaKnown RBP15.2■□□□□ 0.02
PTPN7-216ENST00000492977 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.2■□□□□ 0.02
PTPN7-216ENST00000492977 INTUQ9ULD6 942 aa15.2■□□□□ 0.02
PTPN7-216ENST00000492977 NENFQ9UMX5 172 aa15.2■□□□□ 0.02
PTPN7-216ENST00000492977 V9GYY5 206 aaPredicted RBP15.2■□□□□ 0.02
PTPN7-216ENST00000492977 FOXN3O00409 490 aaPredicted RBP15.19■□□□□ 0.02
PTPN7-216ENST00000492977 PPFIA4O75335 1185 aa15.19■□□□□ 0.02
PTPN7-216ENST00000492977 MOCS3O95396 460 aa15.19■□□□□ 0.02
PTPN7-216ENST00000492977 ATP1A1P05023 1023 aaKnown RBP15.19■□□□□ 0.02
PTPN7-216ENST00000492977 LGALS2P05162 132 aa15.19■□□□□ 0.02
PTPN7-216ENST00000492977 PRLRP16471 622 aa15.19■□□□□ 0.02
PTPN7-216ENST00000492977 MFAP3P55082 362 aa15.19■□□□□ 0.02
PTPN7-216ENST00000492977 TFDP1Q14186 410 aa15.19■□□□□ 0.02
PTPN7-216ENST00000492977 ARHGAP44Q17R89 818 aa15.19■□□□□ 0.02
PTPN7-216ENST00000492977 IQSEC1Q6DN90 963 aa15.19■□□□□ 0.02
PTPN7-216ENST00000492977 RSRC2Q7L4I2 434 aaKnown RBP15.19■□□□□ 0.02
PTPN7-216ENST00000492977 RASAL3Q86YV0 1011 aa15.19■□□□□ 0.02
PTPN7-216ENST00000492977 ARHGEF19Q8IW93 802 aa15.19■□□□□ 0.02
PTPN7-216ENST00000492977 SLC30A5Q8TAD4 765 aa15.19■□□□□ 0.02
PTPN7-216ENST00000492977 GOLGA1Q92805 767 aa15.19■□□□□ 0.02
PTPN7-216ENST00000492977 FAM81BQ96LP2 452 aa15.19■□□□□ 0.02
PTPN7-216ENST00000492977 POP1Q99575 1024 aaKnown RBP15.19■□□□□ 0.02
PTPN7-216ENST00000492977 TINF2Q9BSI4 451 aa15.19■□□□□ 0.02
PTPN7-216ENST00000492977 MRPL4Q9BYD3 311 aaKnown RBP15.19■□□□□ 0.02
PTPN7-216ENST00000492977 CCDC113Q9H0I3 377 aa15.19■□□□□ 0.02
PTPN7-216ENST00000492977 ABHD16BQ9H3Z7 469 aa15.19■□□□□ 0.02
PTPN7-216ENST00000492977 SUCLA2Q9P2R7 463 aaPredicted RBP15.19■□□□□ 0.02
PTPN7-216ENST00000492977 CAPN6Q9Y6Q1 641 aa15.19■□□□□ 0.02
PTPN7-216ENST00000492977 ZNF236Q9UL36 1845 aa15.19■□□□□ 0.02
PTPN7-216ENST00000492977 DDX3XO00571 662 aaKnown RBP eCLIP15.19■□□□□ 0.02
PTPN7-216ENST00000492977 ENC1O14682 589 aa15.19■□□□□ 0.02
PTPN7-216ENST00000492977 MAGEB2O15479 319 aa15.19■□□□□ 0.02
PTPN7-216ENST00000492977 MSCO60682 206 aa15.19■□□□□ 0.02
PTPN7-216ENST00000492977 ZC3H11AO75152 810 aaKnown RBP eCLIP15.19■□□□□ 0.02
PTPN7-216ENST00000492977 PNMA6AP0CW24 399 aaPredicted RBP15.19■□□□□ 0.02
PTPN7-216ENST00000492977 DLATP10515 647 aaKnown RBP15.19■□□□□ 0.02
PTPN7-216ENST00000492977 ADCYAP1R1P41586 468 aa15.19■□□□□ 0.02
PTPN7-216ENST00000492977 ZNF157P51786 506 aaPredicted RBP15.19■□□□□ 0.02
PTPN7-216ENST00000492977 CHMP4BP1P59074 171 aa15.19■□□□□ 0.02
PTPN7-216ENST00000492977 IRF5Q13568 498 aa15.19■□□□□ 0.02
PTPN7-216ENST00000492977 DUSP28Q4G0W2 176 aa15.19■□□□□ 0.02
PTPN7-216ENST00000492977 C15orf39Q6ZRI6 1047 aa15.19■□□□□ 0.02
PTPN7-216ENST00000492977 SV2AQ7L0J3 742 aa15.19■□□□□ 0.02
PTPN7-216ENST00000492977 SEMA4DQ92854 862 aa15.19■□□□□ 0.02
PTPN7-216ENST00000492977 KIF12Q96FN5 646 aa15.19■□□□□ 0.02
PTPN7-216ENST00000492977 FNBP1Q96RU3 617 aa15.19■□□□□ 0.02
PTPN7-216ENST00000492977 SYT11Q9BT88 431 aa15.19■□□□□ 0.02
PTPN7-216ENST00000492977 MSTO1Q9BUK6 570 aa15.19■□□□□ 0.02
PTPN7-216ENST00000492977 RNPEPQ9H4A4 650 aa15.19■□□□□ 0.02
PTPN7-216ENST00000492977 RAB20Q9NX57 234 aa15.19■□□□□ 0.02
PTPN7-216ENST00000492977 SALL4Q9UJQ4 1053 aa15.19■□□□□ 0.02
PTPN7-216ENST00000492977 ADGRA2Q96PE1 1338 aa15.18■□□□□ 0.02
PTPN7-216ENST00000492977 MYH10P35580 1976 aa15.18■□□□□ 0.02
PTPN7-216ENST00000492977 SRCAPQ6ZRS2 3230 aa15.18■□□□□ 0.02
PTPN7-216ENST00000492977 TOM1L1O75674 476 aa15.18■□□□□ 0.02
PTPN7-216ENST00000492977 SRGAP2CP0DJJ0 459 aa15.18■□□□□ 0.02
PTPN7-216ENST00000492977 KLRC1P26715 233 aa15.18■□□□□ 0.02
PTPN7-216ENST00000492977 MATR3P43243 847 aaKnown RBP eCLIP15.18■□□□□ 0.02
PTPN7-216ENST00000492977 NLRP11P59045 1033 aaKnown RBP15.18■□□□□ 0.02
PTPN7-216ENST00000492977 POU5F1BQ06416 359 aa15.18■□□□□ 0.02
PTPN7-216ENST00000492977 ACVR2BQ13705 512 aa15.18■□□□□ 0.02
PTPN7-216ENST00000492977 MAPK6Q16659 721 aa15.18■□□□□ 0.02
PTPN7-216ENST00000492977 GJC2Q5T442 439 aaPredicted RBP15.18■□□□□ 0.02
PTPN7-216ENST00000492977 EFCAB12Q6NXP0 572 aa15.18■□□□□ 0.02
PTPN7-216ENST00000492977 CRELD2Q6UXH1 353 aaPredicted RBP15.18■□□□□ 0.02
PTPN7-216ENST00000492977 LRRC71Q8N4P6 559 aa15.18■□□□□ 0.02
PTPN7-216ENST00000492977 RNF149Q8NC42 400 aa15.18■□□□□ 0.02
PTPN7-216ENST00000492977 AFG1LQ8WV93 481 aa15.18■□□□□ 0.02
PTPN7-216ENST00000492977 RABGGTAQ92696 567 aa15.18■□□□□ 0.02
PTPN7-216ENST00000492977 ZBTB45Q96K62 511 aaPredicted RBP15.18■□□□□ 0.02
PTPN7-216ENST00000492977 NT5C1BQ96P26 610 aa15.18■□□□□ 0.02
PTPN7-216ENST00000492977 HAPLN2Q9GZV7 340 aa15.18■□□□□ 0.02
PTPN7-216ENST00000492977 COL1A2P08123 1366 aa15.18■□□□□ 0.02
PTPN7-216ENST00000492977 CTAGE15A4D2H0 777 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms