RNA–Protein interactions for RNA: ENST00000492909.1

PDZRN3-210, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best)

Gene PDZRN3, Length 1,776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-210ENST00000492909 ZBTB45Q96K62 511 aaPredicted RBP15.34■□□□□ 0.05
PDZRN3-210ENST00000492909 TCHPQ9BT92 498 aa15.34■□□□□ 0.05
PDZRN3-210ENST00000492909 MSTO1Q9BUK6 570 aa15.34■□□□□ 0.05
PDZRN3-210ENST00000492909 GINS2Q9Y248 185 aa15.34■□□□□ 0.05
PDZRN3-210ENST00000492909 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.34■□□□□ 0.05
PDZRN3-210ENST00000492909 CNTNAP2Q9UHC6 1331 aa15.33■□□□□ 0.04
PDZRN3-210ENST00000492909 KBTBD13C9JR72 458 aa15.33■□□□□ 0.04
PDZRN3-210ENST00000492909 RIOK3O14730 519 aaKnown RBP15.33■□□□□ 0.04
PDZRN3-210ENST00000492909 EXTL3O43909 919 aa15.33■□□□□ 0.04
PDZRN3-210ENST00000492909 LDHAP00338 332 aaKnown RBP15.33■□□□□ 0.04
PDZRN3-210ENST00000492909 AFPP02771 609 aaKnown RBP15.33■□□□□ 0.04
PDZRN3-210ENST00000492909 RPLP2P05387 115 aaKnown RBP15.33■□□□□ 0.04
PDZRN3-210ENST00000492909 PTPN11Q06124 597 aaPredicted RBP15.33■□□□□ 0.04
PDZRN3-210ENST00000492909 SYCP1Q15431 976 aa15.33■□□□□ 0.04
PDZRN3-210ENST00000492909 ATF7IP2Q5U623 682 aa15.33■□□□□ 0.04
PDZRN3-210ENST00000492909 TSHZ1Q6ZSZ6 1077 aa15.33■□□□□ 0.04
PDZRN3-210ENST00000492909 RSPH3Q86UC2 560 aa15.33■□□□□ 0.04
PDZRN3-210ENST00000492909 SERINC5Q86VE9 423 aa15.33■□□□□ 0.04
PDZRN3-210ENST00000492909 CBWD2Q8IUF1 395 aa15.33■□□□□ 0.04
PDZRN3-210ENST00000492909 HAPLN2Q9GZV7 340 aa15.33■□□□□ 0.04
PDZRN3-210ENST00000492909 CRISPLD2Q9H0B8 497 aa15.33■□□□□ 0.04
PDZRN3-210ENST00000492909 TNFSF13BQ9Y275 285 aa15.33■□□□□ 0.04
PDZRN3-210ENST00000492909 MKI67P46013 3256 aaKnown RBP15.33■□□□□ 0.04
PDZRN3-210ENST00000492909 A0A1W2PQ45 241 aaPredicted RBP15.32■□□□□ 0.04
PDZRN3-210ENST00000492909 A0A1W2PQY0 241 aa15.32■□□□□ 0.04
PDZRN3-210ENST00000492909 B4GALT5O43286 388 aa15.32■□□□□ 0.04
PDZRN3-210ENST00000492909 ERLIN2O94905 339 aa15.32■□□□□ 0.04
PDZRN3-210ENST00000492909 ADRB2P07550 413 aa15.32■□□□□ 0.04
PDZRN3-210ENST00000492909 VAMP7P51809 220 aa15.32■□□□□ 0.04
PDZRN3-210ENST00000492909 TBX2Q13207 712 aaPredicted RBP15.32■□□□□ 0.04
PDZRN3-210ENST00000492909 TRIM14Q14142 442 aa15.32■□□□□ 0.04
PDZRN3-210ENST00000492909 PCBP1Q15365 356 aaKnown RBP eCLIP15.32■□□□□ 0.04
PDZRN3-210ENST00000492909 AMHR2Q16671 573 aa15.32■□□□□ 0.04
PDZRN3-210ENST00000492909 PPFIBP1Q86W92 1011 aa15.32■□□□□ 0.04
PDZRN3-210ENST00000492909 OSMRQ99650 979 aa15.32■□□□□ 0.04
PDZRN3-210ENST00000492909 FAM213AQ9BRX8 229 aa15.32■□□□□ 0.04
PDZRN3-210ENST00000492909 OGDHLQ9ULD0 1010 aa15.32■□□□□ 0.04
PDZRN3-210ENST00000492909 DNAH12Q6ZR08 3092 aa15.31■□□□□ 0.04
PDZRN3-210ENST00000492909 ZNF233A6NK53 670 aa15.31■□□□□ 0.04
PDZRN3-210ENST00000492909 DARSP14868 501 aaKnown RBP15.31■□□□□ 0.04
PDZRN3-210ENST00000492909 PROZP22891 400 aa15.31■□□□□ 0.04
PDZRN3-210ENST00000492909 EIF4BP23588 611 aaKnown RBP15.31■□□□□ 0.04
PDZRN3-210ENST00000492909 MCL1Q07820 350 aa15.31■□□□□ 0.04
PDZRN3-210ENST00000492909 PTGISQ16647 500 aa15.31■□□□□ 0.04
PDZRN3-210ENST00000492909 ZNF568Q3ZCX4 644 aa15.31■□□□□ 0.04
PDZRN3-210ENST00000492909 MPZL3Q6UWV2 235 aa15.31■□□□□ 0.04
PDZRN3-210ENST00000492909 USP37Q86T82 979 aa15.31■□□□□ 0.04
PDZRN3-210ENST00000492909 DIS3LQ8TF46 1054 aaKnown RBP15.31■□□□□ 0.04
PDZRN3-210ENST00000492909 PCMTD1Q96MG8 357 aaPredicted RBP15.31■□□□□ 0.04
PDZRN3-210ENST00000492909 CDHR5Q9HBB8 845 aa15.31■□□□□ 0.04
PDZRN3-210ENST00000492909 PTPRHQ9HD43 1115 aa15.31■□□□□ 0.04
PDZRN3-210ENST00000492909 STARD7Q9NQZ5 370 aa15.31■□□□□ 0.04
PDZRN3-210ENST00000492909 M0QZ92 97 aa15.31■□□□□ 0.04
PDZRN3-210ENST00000492909 DNM1LO00429 736 aa15.31■□□□□ 0.04
PDZRN3-210ENST00000492909 ABLIM1O14639 778 aa15.31■□□□□ 0.04
PDZRN3-210ENST00000492909 TPM1P09493 284 aa15.31■□□□□ 0.04
PDZRN3-210ENST00000492909 TRIM49P0CI25 452 aa15.31■□□□□ 0.04
PDZRN3-210ENST00000492909 TRIM49CP0CI26 452 aa15.31■□□□□ 0.04
PDZRN3-210ENST00000492909 HARSP12081 509 aaKnown RBP15.31■□□□□ 0.04
PDZRN3-210ENST00000492909 ARF4P18085 180 aaPredicted RBP15.31■□□□□ 0.04
PDZRN3-210ENST00000492909 TRIM21P19474 475 aaKnown RBP15.31■□□□□ 0.04
PDZRN3-210ENST00000492909 MNX1P50219 401 aaPredicted RBP15.31■□□□□ 0.04
PDZRN3-210ENST00000492909 CRYBB1P53674 252 aaPredicted RBP15.31■□□□□ 0.04
PDZRN3-210ENST00000492909 MCCD1P59942 119 aaPredicted RBP15.31■□□□□ 0.04
PDZRN3-210ENST00000492909 CYP24A1Q07973 514 aa15.31■□□□□ 0.04
PDZRN3-210ENST00000492909 NCBP1Q09161 790 aaKnown RBP15.31■□□□□ 0.04
PDZRN3-210ENST00000492909 ZBTB33Q86T24 672 aa15.31■□□□□ 0.04
PDZRN3-210ENST00000492909 CCDC155Q8N6L0 562 aa15.31■□□□□ 0.04
PDZRN3-210ENST00000492909 CCDC150Q8NCX0 1101 aa15.31■□□□□ 0.04
PDZRN3-210ENST00000492909 MFSD14AQ96MC6 490 aa15.31■□□□□ 0.04
PDZRN3-210ENST00000492909 PHF24Q9UPV7 400 aa15.31■□□□□ 0.04
PDZRN3-210ENST00000492909 SIK3Q9Y2K2 1263 aa15.31■□□□□ 0.04
PDZRN3-210ENST00000492909 A0A0U1RQG5 324 aaPredicted RBP15.3■□□□□ 0.04
PDZRN3-210ENST00000492909 GTPBP10A4D1E9 387 aaKnown RBP15.3■□□□□ 0.04
PDZRN3-210ENST00000492909 OGTO15294 1046 aa15.3■□□□□ 0.04
PDZRN3-210ENST00000492909 CTIFO43310 598 aaKnown RBP15.3■□□□□ 0.04
PDZRN3-210ENST00000492909 TSPAN1O60635 241 aa15.3■□□□□ 0.04
PDZRN3-210ENST00000492909 SFPQP23246 707 aaKnown RBP eCLIP15.3■□□□□ 0.04
PDZRN3-210ENST00000492909 FMO5P49326 533 aa15.3■□□□□ 0.04
PDZRN3-210ENST00000492909 ACOT2P49753 483 aa15.3■□□□□ 0.04
PDZRN3-210ENST00000492909 MRPS6P82932 125 aaKnown RBP15.3■□□□□ 0.04
PDZRN3-210ENST00000492909 ENPEPQ07075 957 aa15.3■□□□□ 0.04
PDZRN3-210ENST00000492909 SNX17Q15036 470 aa15.3■□□□□ 0.04
PDZRN3-210ENST00000492909 CATSPER4Q7RTX7 472 aa15.3■□□□□ 0.04
PDZRN3-210ENST00000492909 RPAINQ86UA6 219 aa15.3■□□□□ 0.04
PDZRN3-210ENST00000492909 TMC2Q8TDI7 906 aa15.3■□□□□ 0.04
PDZRN3-210ENST00000492909 PARD3BQ8TEW8 1205 aa15.3■□□□□ 0.04
PDZRN3-210ENST00000492909 IQCDQ96DY2 449 aa15.3■□□□□ 0.04
PDZRN3-210ENST00000492909 NUP58Q9BVL2 599 aa15.3■□□□□ 0.04
PDZRN3-210ENST00000492909 CELF4Q9BZC1 486 aaKnown RBP15.3■□□□□ 0.04
PDZRN3-210ENST00000492909 NOD1Q9Y239 953 aa15.3■□□□□ 0.04
PDZRN3-210ENST00000492909 STX10O60499 249 aa15.29■□□□□ 0.04
PDZRN3-210ENST00000492909 GYPCP04921 128 aa15.29■□□□□ 0.04
PDZRN3-210ENST00000492909 TNNT1P13805 278 aa15.29■□□□□ 0.04
PDZRN3-210ENST00000492909 DLG4P78352 724 aa15.29■□□□□ 0.04
PDZRN3-210ENST00000492909 CCZ1BP86790 482 aa15.29■□□□□ 0.04
PDZRN3-210ENST00000492909 CCZ1P86791 482 aaPredicted RBP15.29■□□□□ 0.04
PDZRN3-210ENST00000492909 RBL2Q08999 1139 aa15.29■□□□□ 0.04
PDZRN3-210ENST00000492909 ARID5BQ14865 1188 aa15.29■□□□□ 0.04
PDZRN3-210ENST00000492909 EEF1DP3Q658K8 133 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms