RNA–Protein interactions for RNA: ENST00000492883.5

CCM2-217, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-217ENST00000492883 PCDHB13Q9Y5F0 798 aa15.32■□□□□ 0.04
CCM2-217ENST00000492883 PVALEFA0A1B0GWK0 134 aa15.31■□□□□ 0.04
CCM2-217ENST00000492883 HNRNPDLO14979 420 aaKnown RBP15.31■□□□□ 0.04
CCM2-217ENST00000492883 CLDN3O15551 220 aa15.31■□□□□ 0.04
CCM2-217ENST00000492883 RB1P06400 928 aa15.31■□□□□ 0.04
CCM2-217ENST00000492883 HARSP12081 509 aaKnown RBP15.31■□□□□ 0.04
CCM2-217ENST00000492883 MPZL3Q6UWV2 235 aa15.31■□□□□ 0.04
CCM2-217ENST00000492883 LRRC55Q6ZSA7 311 aa15.31■□□□□ 0.04
CCM2-217ENST00000492883 STXBP4Q6ZWJ1 553 aa15.31■□□□□ 0.04
CCM2-217ENST00000492883 UNC13DQ70J99 1090 aa15.31■□□□□ 0.04
CCM2-217ENST00000492883 MYLIPQ8WY64 445 aa15.31■□□□□ 0.04
CCM2-217ENST00000492883 ZBTB45Q96K62 511 aaPredicted RBP15.31■□□□□ 0.04
CCM2-217ENST00000492883 GUCD1Q96NT3 240 aa15.31■□□□□ 0.04
CCM2-217ENST00000492883 FAM193BQ96PV7 902 aaPredicted RBP15.31■□□□□ 0.04
CCM2-217ENST00000492883 CDT1Q9H211 546 aa15.31■□□□□ 0.04
CCM2-217ENST00000492883 KLK14Q9P0G3 267 aa15.31■□□□□ 0.04
CCM2-217ENST00000492883 EXOC7Q9UPT5 735 aa15.31■□□□□ 0.04
CCM2-217ENST00000492883 GDAQ9Y2T3 454 aa15.31■□□□□ 0.04
CCM2-217ENST00000492883 PCDHB12Q9Y5F1 795 aa15.31■□□□□ 0.04
CCM2-217ENST00000492883 TRIOBPQ9H2D6 2365 aa15.31■□□□□ 0.04
CCM2-217ENST00000492883 ARL5CA6NH57 179 aa15.3■□□□□ 0.04
CCM2-217ENST00000492883 EPOPA6NHQ4 379 aa15.3■□□□□ 0.04
CCM2-217ENST00000492883 GTPBP6O43824 516 aaPredicted RBP15.3■□□□□ 0.04
CCM2-217ENST00000492883 POMCP01189 267 aa15.3■□□□□ 0.04
CCM2-217ENST00000492883 MYL1P05976 194 aa15.3■□□□□ 0.04
CCM2-217ENST00000492883 MCF2P10911 925 aa15.3■□□□□ 0.04
CCM2-217ENST00000492883 LAG3P18627 525 aa15.3■□□□□ 0.04
CCM2-217ENST00000492883 IGFBP4P22692 258 aa15.3■□□□□ 0.04
CCM2-217ENST00000492883 PROZP22891 400 aa15.3■□□□□ 0.04
CCM2-217ENST00000492883 MLH1P40692 756 aa15.3■□□□□ 0.04
CCM2-217ENST00000492883 GPM6BQ13491 265 aa15.3■□□□□ 0.04
CCM2-217ENST00000492883 ALCAMQ13740 583 aa15.3■□□□□ 0.04
CCM2-217ENST00000492883 KANK3Q6NY19 840 aa15.3■□□□□ 0.04
CCM2-217ENST00000492883 MAP4K3Q8IVH8 894 aa15.3■□□□□ 0.04
CCM2-217ENST00000492883 THNSL1Q8IYQ7 743 aa15.3■□□□□ 0.04
CCM2-217ENST00000492883 SYCP3Q8IZU3 236 aa15.3■□□□□ 0.04
CCM2-217ENST00000492883 HPS3Q969F9 1004 aa15.3■□□□□ 0.04
CCM2-217ENST00000492883 HVCN1Q96D96 273 aa15.3■□□□□ 0.04
CCM2-217ENST00000492883 ACCSQ96QU6 501 aa15.3■□□□□ 0.04
CCM2-217ENST00000492883 RPS6KC1Q96S38 1066 aa15.3■□□□□ 0.04
CCM2-217ENST00000492883 CCDC94Q9BW85 323 aaPredicted RBP15.3■□□□□ 0.04
CCM2-217ENST00000492883 PLVAPQ9BX97 442 aa15.3■□□□□ 0.04
CCM2-217ENST00000492883 GBP3Q9H0R5 595 aa15.3■□□□□ 0.04
CCM2-217ENST00000492883 CWH43Q9H720 699 aa15.3■□□□□ 0.04
CCM2-217ENST00000492883 TBC1D13Q9NVG8 400 aa15.3■□□□□ 0.04
CCM2-217ENST00000492883 HCSTQ9UBK5 93 aa15.3■□□□□ 0.04
CCM2-217ENST00000492883 MYH15Q9Y2K3 1946 aa15.29■□□□□ 0.04
CCM2-217ENST00000492883 GADD45BO75293 160 aaPredicted RBP15.29■□□□□ 0.04
CCM2-217ENST00000492883 RECQL4O94761 1208 aa15.29■□□□□ 0.04
CCM2-217ENST00000492883 PRPF6O94906 941 aaKnown RBP15.29■□□□□ 0.04
CCM2-217ENST00000492883 LINC00271P0C7V0 271 aa15.29■□□□□ 0.04
CCM2-217ENST00000492883 MYBP10242 640 aa15.29■□□□□ 0.04
CCM2-217ENST00000492883 ALDH7A1P49419 539 aaKnown RBP15.29■□□□□ 0.04
CCM2-217ENST00000492883 AFF1P51825 1210 aaKnown RBP15.29■□□□□ 0.04
CCM2-217ENST00000492883 YARSP54577 528 aaKnown RBP15.29■□□□□ 0.04
CCM2-217ENST00000492883 OSTNP61366 133 aa15.29■□□□□ 0.04
CCM2-217ENST00000492883 FAM160A1Q05DH4 1040 aa15.29■□□□□ 0.04
CCM2-217ENST00000492883 NOLC1Q14978 699 aaKnown RBP eCLIP15.29■□□□□ 0.04
CCM2-217ENST00000492883 FAM26FQ5R3K3 315 aa15.29■□□□□ 0.04
CCM2-217ENST00000492883 L1TD1Q5T7N2 865 aaKnown RBP15.29■□□□□ 0.04
CCM2-217ENST00000492883 FMR1NBQ8N0W7 255 aaPredicted RBP15.29■□□□□ 0.04
CCM2-217ENST00000492883 CCDC47Q96A33 483 aaKnown RBP15.29■□□□□ 0.04
CCM2-217ENST00000492883 ZFP42Q96MM3 310 aa15.29■□□□□ 0.04
CCM2-217ENST00000492883 ZNF558Q96NG5 402 aa15.29■□□□□ 0.04
CCM2-217ENST00000492883 C11orf84Q9BUA3 381 aaPredicted RBP15.29■□□□□ 0.04
CCM2-217ENST00000492883 STRA6Q9BX79 667 aa15.29■□□□□ 0.04
CCM2-217ENST00000492883 MICAL3Q7RTP6 2002 aa15.29■□□□□ 0.04
CCM2-217ENST00000492883 ANKRD63C9JTQ0 380 aa15.28■□□□□ 0.04
CCM2-217ENST00000492883 C5orf67F2Z3F1 127 aa15.28■□□□□ 0.04
CCM2-217ENST00000492883 H3BNC9 293 aa15.28■□□□□ 0.04
CCM2-217ENST00000492883 ABLIM1O14639 778 aa15.28■□□□□ 0.04
CCM2-217ENST00000492883 ZC3H11AO75152 810 aaKnown RBP eCLIP15.28■□□□□ 0.04
CCM2-217ENST00000492883 PRPF40AO75400 957 aaKnown RBP15.28■□□□□ 0.04
CCM2-217ENST00000492883 PPP1R37O75864 691 aa15.28■□□□□ 0.04
CCM2-217ENST00000492883 PIGRP01833 764 aa15.28■□□□□ 0.04
CCM2-217ENST00000492883 FOSL2P15408 326 aa15.28■□□□□ 0.04
CCM2-217ENST00000492883 GRM5P41594 1212 aa15.28■□□□□ 0.04
CCM2-217ENST00000492883 SCNN1GP51170 649 aa15.28■□□□□ 0.04
CCM2-217ENST00000492883 CASP5P51878 434 aa15.28■□□□□ 0.04
CCM2-217ENST00000492883 MCL1Q07820 350 aa15.28■□□□□ 0.04
CCM2-217ENST00000492883 KCNA1Q09470 495 aa15.28■□□□□ 0.04
CCM2-217ENST00000492883 SNW1Q13573 536 aaKnown RBP15.28■□□□□ 0.04
CCM2-217ENST00000492883 SLFN12LQ6IEE8 588 aa15.28■□□□□ 0.04
CCM2-217ENST00000492883 KCNT2Q6UVM3 1135 aa15.28■□□□□ 0.04
CCM2-217ENST00000492883 CEP120Q8N960 986 aa15.28■□□□□ 0.04
CCM2-217ENST00000492883 KLHL23Q8NBE8 558 aa15.28■□□□□ 0.04
CCM2-217ENST00000492883 COLGALT1Q8NBJ5 622 aa15.28■□□□□ 0.04
CCM2-217ENST00000492883 TMEM87AQ8NBN3 555 aa15.28■□□□□ 0.04
CCM2-217ENST00000492883 ENGASEQ8NFI3 743 aa15.28■□□□□ 0.04
CCM2-217ENST00000492883 GDPD5Q8WTR4 605 aa15.28■□□□□ 0.04
CCM2-217ENST00000492883 ACAP3Q96P50 834 aa15.28■□□□□ 0.04
CCM2-217ENST00000492883 FGFBP2Q9BYJ0 223 aa15.28■□□□□ 0.04
CCM2-217ENST00000492883 NRDE2Q9H7Z3 1164 aa15.28■□□□□ 0.04
CCM2-217ENST00000492883 TMEM206Q9H813 350 aa15.28■□□□□ 0.04
CCM2-217ENST00000492883 EXOC1Q9NV70 894 aa15.28■□□□□ 0.04
CCM2-217ENST00000492883 MIOSQ9NXC5 875 aa15.28■□□□□ 0.04
CCM2-217ENST00000492883 DDHD2O94830 711 aa15.27■□□□□ 0.04
CCM2-217ENST00000492883 RPN1P04843 607 aaKnown RBP15.27■□□□□ 0.04
CCM2-217ENST00000492883 ALDH2P05091 517 aa15.27■□□□□ 0.04
CCM2-217ENST00000492883 PRR29P0C7W0 189 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms