RNA–Protein interactions for RNA: ENST00000492556.5

CHKB-CPT1B-203, Transcript of CHKB-CPT1B readthrough (NMD candidate), humanhuman

TSL 2

Gene CHKB-CPT1B, Length 4,906 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1B-203ENST00000492556 CALB1P05937 261 aa22.42■■□□□ 1.18
CHKB-CPT1B-203ENST00000492556 MARCH10Q8NA82 808 aaPredicted RBP22.42■■□□□ 1.18
CHKB-CPT1B-203ENST00000492556 FBXL13Q8NEE6 735 aa22.42■■□□□ 1.18
CHKB-CPT1B-203ENST00000492556 KIAA1586Q9HCI6 787 aa22.42■■□□□ 1.18
CHKB-CPT1B-203ENST00000492556 EPS15L1Q9UBC2 864 aa22.42■■□□□ 1.18
CHKB-CPT1B-203ENST00000492556 CREB3O43889 395 aa22.42■■□□□ 1.18
CHKB-CPT1B-203ENST00000492556 KRT38O76015 456 aa22.42■■□□□ 1.18
CHKB-CPT1B-203ENST00000492556 ARSEP51690 589 aa22.42■■□□□ 1.18
CHKB-CPT1B-203ENST00000492556 TMEM35BQ8NCS4 154 aa22.42■■□□□ 1.18
CHKB-CPT1B-203ENST00000492556 FOXP3Q9BZS1 431 aa22.42■■□□□ 1.18
CHKB-CPT1B-203ENST00000492556 SEPT10Q9P0V9 454 aa22.42■■□□□ 1.18
CHKB-CPT1B-203ENST00000492556 EIF3DO15371 548 aaKnown RBP eCLIP22.42■■□□□ 1.18
CHKB-CPT1B-203ENST00000492556 P4HBP07237 508 aaKnown RBP22.42■■□□□ 1.18
CHKB-CPT1B-203ENST00000492556 CYP11B2P19099 503 aa22.42■■□□□ 1.18
CHKB-CPT1B-203ENST00000492556 RPA1P27694 616 aa22.42■■□□□ 1.18
CHKB-CPT1B-203ENST00000492556 MRPS35P82673 323 aaKnown RBP22.42■■□□□ 1.18
CHKB-CPT1B-203ENST00000492556 TMEM270Q6UE05 265 aa22.42■■□□□ 1.18
CHKB-CPT1B-203ENST00000492556 DNAJC9Q8WXX5 260 aa22.42■■□□□ 1.18
CHKB-CPT1B-203ENST00000492556 FAF2Q96CS3 445 aa22.42■■□□□ 1.18
CHKB-CPT1B-203ENST00000492556 SERPINI1Q99574 410 aa22.42■■□□□ 1.18
CHKB-CPT1B-203ENST00000492556 AIPL1Q9NZN9 384 aa22.42■■□□□ 1.18
CHKB-CPT1B-203ENST00000492556 GH2P01242 217 aa22.41■■□□□ 1.18
CHKB-CPT1B-203ENST00000492556 FNTAP49354 379 aa22.41■■□□□ 1.18
CHKB-CPT1B-203ENST00000492556 THAP2Q9H0W7 228 aa22.41■■□□□ 1.18
CHKB-CPT1B-203ENST00000492556 GOLGA8QA0A0J9YX86 632 aa22.41■■□□□ 1.18
CHKB-CPT1B-203ENST00000492556 GOLGA8OA6NCC3 632 aa22.41■■□□□ 1.18
CHKB-CPT1B-203ENST00000492556 GOLGA8NF8WBI6 632 aa22.41■■□□□ 1.18
CHKB-CPT1B-203ENST00000492556 ASAP2O43150 1006 aa22.41■■□□□ 1.18
CHKB-CPT1B-203ENST00000492556 CCDC22O60826 627 aa22.41■■□□□ 1.18
CHKB-CPT1B-203ENST00000492556 FAM196AQ6ZSG2 479 aa22.41■■□□□ 1.18
CHKB-CPT1B-203ENST00000492556 ADGRA1Q86SQ6 560 aa22.41■■□□□ 1.18
CHKB-CPT1B-203ENST00000492556 ANKRD36BP1Q96IX9 119 aa22.41■■□□□ 1.18
CHKB-CPT1B-203ENST00000492556 MEGF6O75095 1541 aa22.41■■□□□ 1.18
CHKB-CPT1B-203ENST00000492556 SRRM3A6NNA2 597 aaPredicted RBP22.41■■□□□ 1.18
CHKB-CPT1B-203ENST00000492556 F5H6K3 240 aa22.41■■□□□ 1.18
CHKB-CPT1B-203ENST00000492556 RARGP13631 454 aa22.41■■□□□ 1.18
CHKB-CPT1B-203ENST00000492556 KLRC3Q07444 240 aa22.41■■□□□ 1.18
CHKB-CPT1B-203ENST00000492556 EPHA7Q15375 998 aa22.41■■□□□ 1.18
CHKB-CPT1B-203ENST00000492556 TRIM72Q6ZMU5 477 aa22.41■■□□□ 1.18
CHKB-CPT1B-203ENST00000492556 EIF1ADQ8N9N8 165 aaKnown RBP22.41■■□□□ 1.18
CHKB-CPT1B-203ENST00000492556 TTC1Q99614 292 aa22.41■■□□□ 1.18
CHKB-CPT1B-203ENST00000492556 ZSWIM1Q9BR11 485 aa22.41■■□□□ 1.18
CHKB-CPT1B-203ENST00000492556 RCCD1A6NED2 376 aa22.41■■□□□ 1.18
CHKB-CPT1B-203ENST00000492556 FBXO25Q8TCJ0 367 aa22.41■■□□□ 1.18
CHKB-CPT1B-203ENST00000492556 DEPDC1BQ8WUY9 529 aa22.41■■□□□ 1.18
CHKB-CPT1B-203ENST00000492556 APOBEC2Q9Y235 224 aaKnown RBP22.41■■□□□ 1.18
CHKB-CPT1B-203ENST00000492556 PABPN1LA6NDY0 278 aaKnown RBP22.4■■□□□ 1.18
CHKB-CPT1B-203ENST00000492556 ITGA8P53708 1063 aa22.4■■□□□ 1.18
CHKB-CPT1B-203ENST00000492556 MMEL1Q495T6 779 aa22.4■■□□□ 1.18
CHKB-CPT1B-203ENST00000492556 SLFN12LQ6IEE8 588 aa22.4■■□□□ 1.18
CHKB-CPT1B-203ENST00000492556 SLC13A5Q86YT5 568 aaPredicted RBP22.4■■□□□ 1.18
CHKB-CPT1B-203ENST00000492556 RIBC1Q8N443 379 aaPredicted RBP22.4■■□□□ 1.18
CHKB-CPT1B-203ENST00000492556 PRPF38AQ8NAV1 312 aaKnown RBP22.4■■□□□ 1.18
CHKB-CPT1B-203ENST00000492556 DBNDD1Q9H9R9 158 aa22.4■■□□□ 1.18
CHKB-CPT1B-203ENST00000492556 REXO2Q9Y3B8 237 aaKnown RBP22.4■■□□□ 1.18
CHKB-CPT1B-203ENST00000492556 ZNF335Q9H4Z2 1342 aaPredicted RBP22.4■■□□□ 1.18
CHKB-CPT1B-203ENST00000492556 NVLO15381 856 aaKnown RBP22.4■■□□□ 1.18
CHKB-CPT1B-203ENST00000492556 TRAPPC3O43617 180 aa22.4■■□□□ 1.18
CHKB-CPT1B-203ENST00000492556 ZBED1O96006 694 aa22.4■■□□□ 1.18
CHKB-CPT1B-203ENST00000492556 PDZD4Q76G19 769 aaPredicted RBP22.4■■□□□ 1.18
CHKB-CPT1B-203ENST00000492556 TMC3Q7Z5M5 1100 aa22.4■■□□□ 1.18
CHKB-CPT1B-203ENST00000492556 GGA2Q9UJY4 613 aa22.4■■□□□ 1.18
CHKB-CPT1B-203ENST00000492556 PGM1P36871 562 aa22.4■■□□□ 1.18
CHKB-CPT1B-203ENST00000492556 JAK3P52333 1124 aa22.4■■□□□ 1.18
CHKB-CPT1B-203ENST00000492556 P3H1Q32P28 736 aa22.4■■□□□ 1.18
CHKB-CPT1B-203ENST00000492556 HIPK4Q8NE63 616 aa22.4■■□□□ 1.18
CHKB-CPT1B-203ENST00000492556 C18orf8Q96DM3 657 aa22.4■■□□□ 1.18
CHKB-CPT1B-203ENST00000492556 HSD3B7Q9H2F3 369 aa22.4■■□□□ 1.18
CHKB-CPT1B-203ENST00000492556 JMJD4Q9H9V9 463 aa22.4■■□□□ 1.18
CHKB-CPT1B-203ENST00000492556 MARK3P27448 753 aa22.4■■□□□ 1.18
CHKB-CPT1B-203ENST00000492556 TFAMQ00059 246 aaKnown RBP22.4■■□□□ 1.18
CHKB-CPT1B-203ENST00000492556 HAUS6Q7Z4H7 955 aa22.4■■□□□ 1.18
CHKB-CPT1B-203ENST00000492556 OLFM3Q96PB7 478 aa22.4■■□□□ 1.18
CHKB-CPT1B-203ENST00000492556 TACC3Q9Y6A5 838 aa22.4■■□□□ 1.18
CHKB-CPT1B-203ENST00000492556 LMTK3Q96Q04 1460 aa22.39■■□□□ 1.18
CHKB-CPT1B-203ENST00000492556 PRPSAP2O60256 369 aa22.39■■□□□ 1.18
CHKB-CPT1B-203ENST00000492556 TRPA1O75762 1119 aa22.39■■□□□ 1.18
CHKB-CPT1B-203ENST00000492556 MREGQ8N565 214 aa22.39■■□□□ 1.18
CHKB-CPT1B-203ENST00000492556 LRGUKQ96M69 825 aa22.39■■□□□ 1.18
CHKB-CPT1B-203ENST00000492556 PPCSQ9HAB8 311 aa22.39■■□□□ 1.18
CHKB-CPT1B-203ENST00000492556 NPHS2Q9NP85 383 aa22.39■■□□□ 1.18
CHKB-CPT1B-203ENST00000492556 C4orf33Q8N1A6 199 aa22.39■■□□□ 1.17
CHKB-CPT1B-203ENST00000492556 FAM213AQ9BRX8 229 aa22.39■■□□□ 1.17
CHKB-CPT1B-203ENST00000492556 MSTO1Q9BUK6 570 aa22.39■■□□□ 1.17
CHKB-CPT1B-203ENST00000492556 BCS1LQ9Y276 419 aa22.39■■□□□ 1.17
CHKB-CPT1B-203ENST00000492556 SIK3Q9Y2K2 1263 aa22.39■■□□□ 1.17
CHKB-CPT1B-203ENST00000492556 DDX52Q9Y2R4 599 aaKnown RBP eCLIP22.39■■□□□ 1.17
CHKB-CPT1B-203ENST00000492556 DENND3A2RUS2 1198 aa22.39■■□□□ 1.17
CHKB-CPT1B-203ENST00000492556 O00370 1275 aa22.39■■□□□ 1.17
CHKB-CPT1B-203ENST00000492556 HIF1AQ16665 826 aa22.39■■□□□ 1.17
CHKB-CPT1B-203ENST00000492556 SWT1Q5T5J6 900 aaKnown RBP22.39■■□□□ 1.17
CHKB-CPT1B-203ENST00000492556 TMEM154Q6P9G4 183 aa22.39■■□□□ 1.17
CHKB-CPT1B-203ENST00000492556 FUKQ8N0W3 1084 aa22.39■■□□□ 1.17
CHKB-CPT1B-203ENST00000492556 SLC30A5Q8TAD4 765 aa22.39■■□□□ 1.17
CHKB-CPT1B-203ENST00000492556 NXF1Q9UBU9 619 aaKnown RBP22.39■■□□□ 1.17
CHKB-CPT1B-203ENST00000492556 LDHAP00338 332 aaKnown RBP22.39■■□□□ 1.17
CHKB-CPT1B-203ENST00000492556 QARSP47897 775 aaKnown RBP22.39■■□□□ 1.17
CHKB-CPT1B-203ENST00000492556 FAM96AQ9H5X1 160 aa22.39■■□□□ 1.17
CHKB-CPT1B-203ENST00000492556 SUDS3Q9H7L9 328 aaPredicted RBP22.39■■□□□ 1.17
CHKB-CPT1B-203ENST00000492556 UBE4BO95155 1302 aa22.39■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms