RNA–Protein interactions for RNA: ENST00000492407.1

HDAC3-212, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-212ENST00000492407 GLUD1P00367 558 aa10.13□□□□□ -0.79
HDAC3-212ENST00000492407 ARF4P18085 180 aaPredicted RBP10.13□□□□□ -0.79
HDAC3-212ENST00000492407 MUTP22033 750 aa10.13□□□□□ -0.79
HDAC3-212ENST00000492407 NBL1P41271 181 aa10.13□□□□□ -0.79
HDAC3-212ENST00000492407 OR1G1P47890 313 aa10.13□□□□□ -0.79
HDAC3-212ENST00000492407 RARRES1P49788 294 aa10.13□□□□□ -0.79
HDAC3-212ENST00000492407 AFF1P51825 1210 aaKnown RBP10.13□□□□□ -0.79
HDAC3-212ENST00000492407 AK2P54819 239 aa10.13□□□□□ -0.79
HDAC3-212ENST00000492407 CYP4A11Q02928 519 aa10.13□□□□□ -0.79
HDAC3-212ENST00000492407 GRIK3Q13003 919 aa10.13□□□□□ -0.79
HDAC3-212ENST00000492407 NR5A1Q13285 461 aa10.13□□□□□ -0.79
HDAC3-212ENST00000492407 CAPSQ13938 189 aa10.13□□□□□ -0.79
HDAC3-212ENST00000492407 TRIM29Q14134 588 aa10.13□□□□□ -0.79
HDAC3-212ENST00000492407 FAM187BQ17R55 369 aa10.13□□□□□ -0.79
HDAC3-212ENST00000492407 USP41Q3LFD5 358 aa10.13□□□□□ -0.79
HDAC3-212ENST00000492407 EARS2Q5JPH6 523 aaKnown RBP10.13□□□□□ -0.79
HDAC3-212ENST00000492407 CCDC43Q96MW1 224 aaKnown RBP10.13□□□□□ -0.79
HDAC3-212ENST00000492407 NACC1Q96RE7 527 aa10.13□□□□□ -0.79
HDAC3-212ENST00000492407 GAD1Q99259 594 aa10.13□□□□□ -0.79
HDAC3-212ENST00000492407 RTP3Q9BQQ7 232 aa10.13□□□□□ -0.79
HDAC3-212ENST00000492407 EIF2AQ9BY44 585 aaKnown RBP10.13□□□□□ -0.79
HDAC3-212ENST00000492407 TRIM6Q9C030 488 aaPredicted RBP10.13□□□□□ -0.79
HDAC3-212ENST00000492407 C2orf40Q9H1Z8 148 aa10.13□□□□□ -0.79
HDAC3-212ENST00000492407 MFSD1Q9H3U5 465 aa10.13□□□□□ -0.79
HDAC3-212ENST00000492407 TUFT1Q9NNX1 390 aa10.13□□□□□ -0.79
HDAC3-212ENST00000492407 PRMT7Q9NVM4 692 aaPredicted RBP10.13□□□□□ -0.79
HDAC3-212ENST00000492407 MARCH5Q9NX47 278 aa10.13□□□□□ -0.79
HDAC3-212ENST00000492407 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.13□□□□□ -0.79
HDAC3-212ENST00000492407 WNT16Q9UBV4 365 aa10.13□□□□□ -0.79
HDAC3-212ENST00000492407 DUSP12Q9UNI6 340 aa10.13□□□□□ -0.79
HDAC3-212ENST00000492407 ZFP37Q9Y6Q3 630 aaPredicted RBP10.13□□□□□ -0.79
HDAC3-212ENST00000492407 WDR81Q562E7 1941 aa10.13□□□□□ -0.79
HDAC3-212ENST00000492407 CCDC195A0A1B0GUA6 201 aa10.12□□□□□ -0.79
HDAC3-212ENST00000492407 PDGFBP01127 241 aaPredicted RBP10.12□□□□□ -0.79
HDAC3-212ENST00000492407 WEE2P0C1S8 567 aa10.12□□□□□ -0.79
HDAC3-212ENST00000492407 AOC1P19801 751 aa10.12□□□□□ -0.79
HDAC3-212ENST00000492407 GLRA2P23416 452 aa10.12□□□□□ -0.79
HDAC3-212ENST00000492407 SP100P23497 879 aaPredicted RBP10.12□□□□□ -0.79
HDAC3-212ENST00000492407 MLH1P40692 756 aa10.12□□□□□ -0.79
HDAC3-212ENST00000492407 CDCA2Q69YH5 1023 aaPredicted RBP10.12□□□□□ -0.79
HDAC3-212ENST00000492407 PDXDC1Q6P996 788 aa10.12□□□□□ -0.79
HDAC3-212ENST00000492407 LILRA6Q6PI73 481 aa10.12□□□□□ -0.79
HDAC3-212ENST00000492407 RTL10Q7L3V2 364 aa10.12□□□□□ -0.79
HDAC3-212ENST00000492407 DIS3L2Q8IYB7 885 aaKnown RBP10.12□□□□□ -0.79
HDAC3-212ENST00000492407 TMEM105Q8N8V8 129 aa10.12□□□□□ -0.79
HDAC3-212ENST00000492407 GSTCDQ8NEC7 633 aa10.12□□□□□ -0.79
HDAC3-212ENST00000492407 ASAP3Q8TDY4 903 aa10.12□□□□□ -0.79
HDAC3-212ENST00000492407 SECISBP2LQ93073 1101 aaKnown RBP10.12□□□□□ -0.79
HDAC3-212ENST00000492407 PHOX2BQ99453 314 aa10.12□□□□□ -0.79
HDAC3-212ENST00000492407 POLR3CQ9BUI4 534 aaPredicted RBP10.12□□□□□ -0.79
HDAC3-212ENST00000492407 RNF39Q9H2S5 420 aa10.12□□□□□ -0.79
HDAC3-212ENST00000492407 FZD8Q9H461 694 aa10.12□□□□□ -0.79
HDAC3-212ENST00000492407 KCNK12Q9HB15 430 aa10.12□□□□□ -0.79
HDAC3-212ENST00000492407 MAN1C1Q9NR34 630 aa10.12□□□□□ -0.79
HDAC3-212ENST00000492407 GJB4Q9NTQ9 266 aa10.12□□□□□ -0.79
HDAC3-212ENST00000492407 CDH22Q9UJ99 828 aa10.12□□□□□ -0.79
HDAC3-212ENST00000492407 ADAM28Q9UKQ2 775 aa10.12□□□□□ -0.79
HDAC3-212ENST00000492407 STK24Q9Y6E0 443 aa10.12□□□□□ -0.79
HDAC3-212ENST00000492407 BTBD18B2RXH4 712 aa10.11□□□□□ -0.79
HDAC3-212ENST00000492407 GFRA3O60609 400 aa10.11□□□□□ -0.79
HDAC3-212ENST00000492407 SSBP05455 408 aaKnown RBP eCLIP10.11□□□□□ -0.79
HDAC3-212ENST00000492407 ASGR2P07307 311 aa10.11□□□□□ -0.79
HDAC3-212ENST00000492407 TXKP42681 527 aa10.11□□□□□ -0.79
HDAC3-212ENST00000492407 SCNN1GP51170 649 aa10.11□□□□□ -0.79
HDAC3-212ENST00000492407 ELAVL2Q12926 359 aaKnown RBP10.11□□□□□ -0.79
HDAC3-212ENST00000492407 TUSC3Q13454 348 aa10.11□□□□□ -0.79
HDAC3-212ENST00000492407 SAFBQ15424 915 aaKnown RBP eCLIP10.11□□□□□ -0.79
HDAC3-212ENST00000492407 ME3Q16798 604 aa10.11□□□□□ -0.79
HDAC3-212ENST00000492407 KANK3Q6NY19 840 aa10.11□□□□□ -0.79
HDAC3-212ENST00000492407 FUT10Q6P4F1 479 aa10.11□□□□□ -0.79
HDAC3-212ENST00000492407 TAS1R1Q7RTX1 841 aa10.11□□□□□ -0.79
HDAC3-212ENST00000492407 ZBTB8OSQ8IWT0 167 aa10.11□□□□□ -0.79
HDAC3-212ENST00000492407 NSUN7Q8NE18 718 aaKnown RBP10.11□□□□□ -0.79
HDAC3-212ENST00000492407 ERMNQ8TAM6 284 aa10.11□□□□□ -0.79
HDAC3-212ENST00000492407 CPB2Q96IY4 423 aa10.11□□□□□ -0.79
HDAC3-212ENST00000492407 ZFP42Q96MM3 310 aa10.11□□□□□ -0.79
HDAC3-212ENST00000492407 MIOSQ9NXC5 875 aa10.11□□□□□ -0.79
HDAC3-212ENST00000492407 PRG3Q9Y2Y8 225 aaPredicted RBP10.11□□□□□ -0.79
HDAC3-212ENST00000492407 ZDBF2Q9HCK1 2354 aa10.11□□□□□ -0.79
HDAC3-212ENST00000492407 CLUHO75153 1309 aa10.1□□□□□ -0.79
HDAC3-212ENST00000492407 SF3B1O75533 1304 aaKnown RBP eCLIP10.1□□□□□ -0.799e-6■■■■■ 68.9
HDAC3-212ENST00000492407 FAM205CA6NFA0 338 aa10.1□□□□□ -0.79
HDAC3-212ENST00000492407 H0Y858 1186 aa10.1□□□□□ -0.79
HDAC3-212ENST00000492407 C2CD2LO14523 706 aa10.1□□□□□ -0.79
HDAC3-212ENST00000492407 N4BP3O15049 544 aa10.1□□□□□ -0.79
HDAC3-212ENST00000492407 TADA2AO75478 443 aa10.1□□□□□ -0.79
HDAC3-212ENST00000492407 POU2F2P09086 479 aa10.1□□□□□ -0.79
HDAC3-212ENST00000492407 HNRNPA1P09651 372 aaKnown RBP eCLIP10.1□□□□□ -0.79
HDAC3-212ENST00000492407 SPATA31C1P0DKV0 1188 aa10.1□□□□□ -0.79
HDAC3-212ENST00000492407 NPR3P17342 541 aa10.1□□□□□ -0.79
HDAC3-212ENST00000492407 RPA1P27694 616 aa10.1□□□□□ -0.79
HDAC3-212ENST00000492407 HOXA9P31269 272 aa10.1□□□□□ -0.79
HDAC3-212ENST00000492407 FOXK2Q01167 660 aa10.1□□□□□ -0.79
HDAC3-212ENST00000492407 PPP2R5AQ15172 486 aa10.1□□□□□ -0.79
HDAC3-212ENST00000492407 APBB1IPQ7Z5R6 666 aaPredicted RBP10.1□□□□□ -0.79
HDAC3-212ENST00000492407 CATSPER3Q86XQ3 398 aa10.1□□□□□ -0.79
HDAC3-212ENST00000492407 SMG7Q92540 1137 aaKnown RBP10.1□□□□□ -0.79
HDAC3-212ENST00000492407 ZNF707Q96C28 371 aaPredicted RBP10.1□□□□□ -0.79
HDAC3-212ENST00000492407 BORCS6Q96GS4 357 aa10.1□□□□□ -0.79
HDAC3-212ENST00000492407 LLPHQ9BRT6 129 aaKnown RBP10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms