RNA–Protein interactions for RNA: ENST00000491629.5

USF1-206, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 933 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-206ENST00000491629 XPNPEP1Q9NQW7 623 aa14.78□□□□□ -0.04
USF1-206ENST00000491629 SLC2A4RGQ9NR83 387 aa14.78□□□□□ -0.04
USF1-206ENST00000491629 DLL3Q9NYJ7 618 aa14.78□□□□□ -0.04
USF1-206ENST00000491629 F5P12259 2224 aa14.78□□□□□ -0.04
USF1-206ENST00000491629 STARD6P59095 220 aa14.77□□□□□ -0.05
USF1-206ENST00000491629 GPC5P78333 572 aa14.77□□□□□ -0.05
USF1-206ENST00000491629 NTHL1P78549 312 aa14.77□□□□□ -0.05
USF1-206ENST00000491629 AMHR2Q16671 573 aa14.77□□□□□ -0.05
USF1-206ENST00000491629 INF2Q27J81 1249 aa14.77□□□□□ -0.05
USF1-206ENST00000491629 DCLRE1AQ6PJP8 1040 aa14.77□□□□□ -0.05
USF1-206ENST00000491629 PARM1Q6UWI2 310 aa14.77□□□□□ -0.05
USF1-206ENST00000491629 BLIDQ8IZY5 108 aa14.77□□□□□ -0.05
USF1-206ENST00000491629 RNF149Q8NC42 400 aa14.77□□□□□ -0.05
USF1-206ENST00000491629 DAGLBQ8NCG7 672 aa14.77□□□□□ -0.05
USF1-206ENST00000491629 PJA1Q8NG27 643 aa14.77□□□□□ -0.05
USF1-206ENST00000491629 PSPC1Q8WXF1 523 aaKnown RBP14.77□□□□□ -0.05
USF1-206ENST00000491629 SLC7A3Q8WY07 619 aa14.77□□□□□ -0.05
USF1-206ENST00000491629 HAS1Q92839 578 aa14.77□□□□□ -0.05
USF1-206ENST00000491629 CEP170P1Q96L14 293 aa14.77□□□□□ -0.05
USF1-206ENST00000491629 JPH2Q9BR39 696 aaPredicted RBP14.77□□□□□ -0.05
USF1-206ENST00000491629 PAAF1Q9BRP4 392 aa14.77□□□□□ -0.05
USF1-206ENST00000491629 PLEKHA4Q9H4M7 779 aa14.77□□□□□ -0.05
USF1-206ENST00000491629 RGL1Q9NZL6 768 aa14.77□□□□□ -0.05
USF1-206ENST00000491629 DDX25Q9UHL0 483 aaKnown RBP14.77□□□□□ -0.05
USF1-206ENST00000491629 SSX2IPQ9Y2D8 614 aa14.77□□□□□ -0.05
USF1-206ENST00000491629 MTF2Q9Y483 593 aaPredicted RBP14.77□□□□□ -0.05
USF1-206ENST00000491629 C1RP00736 705 aa14.76□□□□□ -0.05
USF1-206ENST00000491629 P4HBP07237 508 aaKnown RBP14.76□□□□□ -0.05
USF1-206ENST00000491629 HSPA4P34932 840 aa14.76□□□□□ -0.05
USF1-206ENST00000491629 PTENP60484 403 aa14.76□□□□□ -0.05
USF1-206ENST00000491629 TOB2Q14106 344 aaPredicted RBP14.76□□□□□ -0.05
USF1-206ENST00000491629 EMC2Q15006 297 aa14.76□□□□□ -0.05
USF1-206ENST00000491629 NONOQ15233 471 aaKnown RBP eCLIP14.76□□□□□ -0.05
USF1-206ENST00000491629 FUT10Q6P4F1 479 aa14.76□□□□□ -0.05
USF1-206ENST00000491629 BLOC1S2Q6QNY1 142 aa14.76□□□□□ -0.05
USF1-206ENST00000491629 PRSS55Q6UWB4 352 aaPredicted RBP14.76□□□□□ -0.05
USF1-206ENST00000491629 RUBCNQ92622 972 aa14.76□□□□□ -0.05
USF1-206ENST00000491629 DDX23Q9BUQ8 820 aaKnown RBP14.76□□□□□ -0.05
USF1-206ENST00000491629 NXF3Q9H4D5 531 aaKnown RBP14.76□□□□□ -0.05
USF1-206ENST00000491629 UBN1Q9NPG3 1134 aa14.76□□□□□ -0.05
USF1-206ENST00000491629 ZDHHC7Q9NXF8 308 aa14.76□□□□□ -0.05
USF1-206ENST00000491629 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.76□□□□□ -0.05
USF1-206ENST00000491629 FNIP2Q9P278 1114 aa14.76□□□□□ -0.05
USF1-206ENST00000491629 COL4A2P08572 1712 aa14.75□□□□□ -0.05
USF1-206ENST00000491629 RALGAPA1Q6GYQ0 2036 aa14.75□□□□□ -0.05
USF1-206ENST00000491629 ZMYND10O75800 440 aa14.75□□□□□ -0.05
USF1-206ENST00000491629 RFX1P22670 979 aa14.75□□□□□ -0.05
USF1-206ENST00000491629 AKAP5P24588 427 aa14.75□□□□□ -0.05
USF1-206ENST00000491629 RFC5P40937 340 aa14.75□□□□□ -0.05
USF1-206ENST00000491629 SPIRE1Q08AE8 756 aa14.75□□□□□ -0.05
USF1-206ENST00000491629 PUM1Q14671 1186 aaKnown RBP eCLIP14.75□□□□□ -0.05
USF1-206ENST00000491629 RTP2Q5QGT7 225 aa14.75□□□□□ -0.05
USF1-206ENST00000491629 POTEHQ6S545 545 aa14.75□□□□□ -0.05
USF1-206ENST00000491629 CDR2LQ86X02 465 aaPredicted RBP14.75□□□□□ -0.05
USF1-206ENST00000491629 C4orf19Q8IY42 314 aa14.75□□□□□ -0.05
USF1-206ENST00000491629 CNNM3Q8NE01 707 aa14.75□□□□□ -0.05
USF1-206ENST00000491629 ASAP3Q8TDY4 903 aa14.75□□□□□ -0.05
USF1-206ENST00000491629 LXNQ9BS40 222 aa14.75□□□□□ -0.05
USF1-206ENST00000491629 APOL6Q9BWW8 343 aa14.75□□□□□ -0.05
USF1-206ENST00000491629 CSRNP2Q9H175 543 aa14.75□□□□□ -0.05
USF1-206ENST00000491629 CXCL16Q9H2A7 254 aa14.75□□□□□ -0.05
USF1-206ENST00000491629 PIDD1Q9HB75 910 aa14.75□□□□□ -0.05
USF1-206ENST00000491629 DPP7Q9UHL4 492 aa14.75□□□□□ -0.05
USF1-206ENST00000491629 USP24Q9UPU5 2620 aa14.75□□□□□ -0.05
USF1-206ENST00000491629 ADAM12O43184 909 aa14.74□□□□□ -0.05
USF1-206ENST00000491629 B4GALT5O43286 388 aa14.74□□□□□ -0.05
USF1-206ENST00000491629 DTNBO60941 627 aa14.74□□□□□ -0.05
USF1-206ENST00000491629 ARF4P18085 180 aaPredicted RBP14.74□□□□□ -0.05
USF1-206ENST00000491629 YWHABP31946 246 aaKnown RBP14.74□□□□□ -0.05
USF1-206ENST00000491629 MBTD1Q05BQ5 628 aa14.74□□□□□ -0.05
USF1-206ENST00000491629 SNW1Q13573 536 aaKnown RBP14.74□□□□□ -0.05
USF1-206ENST00000491629 RSPO4Q2I0M5 234 aaPredicted RBP14.74□□□□□ -0.05
USF1-206ENST00000491629 USP41Q3LFD5 358 aa14.74□□□□□ -0.05
USF1-206ENST00000491629 GRASPQ7Z6J2 395 aaPredicted RBP14.74□□□□□ -0.05
USF1-206ENST00000491629 IFNLR1Q8IU57 520 aaPredicted RBP14.74□□□□□ -0.05
USF1-206ENST00000491629 GPR65Q8IYL9 337 aa14.74□□□□□ -0.05
USF1-206ENST00000491629 DYDC2Q96IM9 177 aa14.74□□□□□ -0.05
USF1-206ENST00000491629 CLSTN3Q9BQT9 956 aa14.74□□□□□ -0.05
USF1-206ENST00000491629 LARP6Q9BRS8 491 aaKnown RBP14.74□□□□□ -0.05
USF1-206ENST00000491629 C22orf23Q9BZE7 217 aa14.74□□□□□ -0.05
USF1-206ENST00000491629 FBXW11Q9UKB1 542 aa14.74□□□□□ -0.05
USF1-206ENST00000491629 ADAM28Q9UKQ2 775 aa14.74□□□□□ -0.05
USF1-206ENST00000491629 KCNJ14Q9UNX9 436 aa14.74□□□□□ -0.05
USF1-206ENST00000491629 CFAP47Q6ZTR5 3102 aa14.74□□□□□ -0.05
USF1-206ENST00000491629 TICRRQ7Z2Z1 1910 aa14.73□□□□□ -0.05
USF1-206ENST00000491629 SHISA7A6NL88 538 aa14.73□□□□□ -0.05
USF1-206ENST00000491629 ASAP2O43150 1006 aa14.73□□□□□ -0.05
USF1-206ENST00000491629 CDC45O75419 566 aa14.73□□□□□ -0.05
USF1-206ENST00000491629 KRT37O76014 449 aa14.73□□□□□ -0.05
USF1-206ENST00000491629 ERLIN2O94905 339 aa14.73□□□□□ -0.05
USF1-206ENST00000491629 FSHRP23945 695 aa14.73□□□□□ -0.05
USF1-206ENST00000491629 IGFBP6P24592 240 aaPredicted RBP14.73□□□□□ -0.05
USF1-206ENST00000491629 AXLP30530 894 aa14.73□□□□□ -0.05
USF1-206ENST00000491629 SSRP1Q08945 709 aaKnown RBP14.73□□□□□ -0.05
USF1-206ENST00000491629 CAPSQ13938 189 aa14.73□□□□□ -0.05
USF1-206ENST00000491629 CTTNQ14247 550 aaKnown RBP14.73□□□□□ -0.05
USF1-206ENST00000491629 EPHA7Q15375 998 aa14.73□□□□□ -0.05
USF1-206ENST00000491629 EARS2Q5JPH6 523 aaKnown RBP14.73□□□□□ -0.05
USF1-206ENST00000491629 NOTUMQ6P988 496 aa14.73□□□□□ -0.05
USF1-206ENST00000491629 ZC3H14Q6PJT7 736 aaKnown RBP14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms