RNA–Protein interactions for RNA: ENST00000491330.1

PDLIM2-217, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-217ENST00000491330 ARL6IP4Q66PJ3 421 aaKnown RBP18.26■□□□□ 0.51
PDLIM2-217ENST00000491330 RASSF8Q8NHQ8 419 aa18.26■□□□□ 0.51
PDLIM2-217ENST00000491330 MFSD14AQ96MC6 490 aa18.26■□□□□ 0.51
PDLIM2-217ENST00000491330 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.26■□□□□ 0.51
PDLIM2-217ENST00000491330 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP18.26■□□□□ 0.51
PDLIM2-217ENST00000491330 ARIH1Q9Y4X5 557 aaPredicted RBP18.26■□□□□ 0.51
PDLIM2-217ENST00000491330 HES2Q9Y543 173 aa18.26■□□□□ 0.51
PDLIM2-217ENST00000491330 GTF3C3Q9Y5Q9 886 aa18.26■□□□□ 0.51
PDLIM2-217ENST00000491330 EYSQ5T1H1 3165 aa18.26■□□□□ 0.51
PDLIM2-217ENST00000491330 FNDC1Q4ZHG4 1894 aaPredicted RBP18.26■□□□□ 0.51
PDLIM2-217ENST00000491330 B4GALT5O43286 388 aa18.25■□□□□ 0.51
PDLIM2-217ENST00000491330 THP07101 528 aa18.25■□□□□ 0.51
PDLIM2-217ENST00000491330 AKAP5P24588 427 aa18.25■□□□□ 0.51
PDLIM2-217ENST00000491330 GLUD2P49448 558 aa18.25■□□□□ 0.51
PDLIM2-217ENST00000491330 CUL4AQ13619 759 aa18.25■□□□□ 0.51
PDLIM2-217ENST00000491330 NBR1Q14596 966 aa18.25■□□□□ 0.51
PDLIM2-217ENST00000491330 COLGALT2Q8IYK4 626 aa18.25■□□□□ 0.51
PDLIM2-217ENST00000491330 PLCD3Q8N3E9 789 aa18.25■□□□□ 0.51
PDLIM2-217ENST00000491330 C4orf32Q8N8J7 132 aa18.25■□□□□ 0.51
PDLIM2-217ENST00000491330 SUSD6Q92537 303 aa18.25■□□□□ 0.51
PDLIM2-217ENST00000491330 CALML4Q96GE6 196 aa18.25■□□□□ 0.51
PDLIM2-217ENST00000491330 APOL5Q9BWW9 433 aa18.25■□□□□ 0.51
PDLIM2-217ENST00000491330 NXF3Q9H4D5 531 aaKnown RBP18.25■□□□□ 0.51
PDLIM2-217ENST00000491330 TSHZ2Q9NRE2 1034 aa18.25■□□□□ 0.51
PDLIM2-217ENST00000491330 TOPORSQ9NS56 1045 aaPredicted RBP18.25■□□□□ 0.51
PDLIM2-217ENST00000491330 LOC730098B7Z3J9 87 aa18.24■□□□□ 0.51
PDLIM2-217ENST00000491330 H0YCG3 227 aa18.24■□□□□ 0.51
PDLIM2-217ENST00000491330 SLC26A4O43511 780 aa18.24■□□□□ 0.51
PDLIM2-217ENST00000491330 PDIA4P13667 645 aaKnown RBP18.24■□□□□ 0.51
PDLIM2-217ENST00000491330 UBA7P41226 1012 aa18.24■□□□□ 0.51
PDLIM2-217ENST00000491330 ELAVL2Q12926 359 aaKnown RBP18.24■□□□□ 0.51
PDLIM2-217ENST00000491330 STRN3Q13033 797 aa18.24■□□□□ 0.51
PDLIM2-217ENST00000491330 KCNC3Q14003 757 aa18.24■□□□□ 0.51
PDLIM2-217ENST00000491330 USP41Q3LFD5 358 aa18.24■□□□□ 0.51
PDLIM2-217ENST00000491330 PDXDC1Q6P996 788 aa18.24■□□□□ 0.51
PDLIM2-217ENST00000491330 BRAPQ7Z569 592 aa18.24■□□□□ 0.51
PDLIM2-217ENST00000491330 ACSF2Q96CM8 615 aaPredicted RBP18.24■□□□□ 0.51
PDLIM2-217ENST00000491330 FAM122AQ96E09 287 aa18.24■□□□□ 0.51
PDLIM2-217ENST00000491330 INTS4Q96HW7 963 aaKnown RBP18.24■□□□□ 0.51
PDLIM2-217ENST00000491330 AK8Q96MA6 479 aa18.24■□□□□ 0.51
PDLIM2-217ENST00000491330 TCHPQ9BT92 498 aa18.24■□□□□ 0.51
PDLIM2-217ENST00000491330 HERC2P3Q9BVR0 1158 aa18.24■□□□□ 0.51
PDLIM2-217ENST00000491330 S1PR5Q9H228 398 aa18.24■□□□□ 0.51
PDLIM2-217ENST00000491330 SFXN1Q9H9B4 322 aa18.24■□□□□ 0.51
PDLIM2-217ENST00000491330 KCND2Q9NZV8 630 aa18.24■□□□□ 0.51
PDLIM2-217ENST00000491330 SF3B1O75533 1304 aaKnown RBP eCLIP18.23■□□□□ 0.51
PDLIM2-217ENST00000491330 C2CD2LO14523 706 aa18.23■□□□□ 0.51
PDLIM2-217ENST00000491330 TOB1P50616 345 aaPredicted RBP18.23■□□□□ 0.51
PDLIM2-217ENST00000491330 ATP2C1P98194 919 aaPredicted RBP18.23■□□□□ 0.51
PDLIM2-217ENST00000491330 DSC1Q08554 894 aa18.23■□□□□ 0.51
PDLIM2-217ENST00000491330 TUSC3Q13454 348 aa18.23■□□□□ 0.51
PDLIM2-217ENST00000491330 PTPN14Q15678 1187 aa18.23■□□□□ 0.51
PDLIM2-217ENST00000491330 RARS2Q5T160 578 aaKnown RBP18.23■□□□□ 0.51
PDLIM2-217ENST00000491330 ATF7IP2Q5U623 682 aa18.23■□□□□ 0.51
PDLIM2-217ENST00000491330 SYCE2Q6PIF2 218 aa18.23■□□□□ 0.51
PDLIM2-217ENST00000491330 TMEM173Q86WV6 379 aaPredicted RBP18.23■□□□□ 0.51
PDLIM2-217ENST00000491330 CDR2LQ86X02 465 aaPredicted RBP18.23■□□□□ 0.51
PDLIM2-217ENST00000491330 GPR65Q8IYL9 337 aa18.23■□□□□ 0.51
PDLIM2-217ENST00000491330 VN1R2Q8NFZ6 395 aa18.23■□□□□ 0.51
PDLIM2-217ENST00000491330 AUTS2Q8WXX7 1259 aa18.23■□□□□ 0.51
PDLIM2-217ENST00000491330 EDAQ92838 391 aa18.23■□□□□ 0.51
PDLIM2-217ENST00000491330 FBXL18Q96ME1 805 aa18.23■□□□□ 0.51
PDLIM2-217ENST00000491330 ZFP42Q96MM3 310 aa18.23■□□□□ 0.51
PDLIM2-217ENST00000491330 KLHL5Q96PQ7 755 aa18.23■□□□□ 0.51
PDLIM2-217ENST00000491330 CCDC94Q9BW85 323 aaPredicted RBP18.23■□□□□ 0.51
PDLIM2-217ENST00000491330 MRPL4Q9BYD3 311 aaKnown RBP18.23■□□□□ 0.51
PDLIM2-217ENST00000491330 RNF39Q9H2S5 420 aa18.23■□□□□ 0.51
PDLIM2-217ENST00000491330 KMT5AQ9NQR1 393 aa18.23■□□□□ 0.51
PDLIM2-217ENST00000491330 KLK14Q9P0G3 267 aa18.23■□□□□ 0.51
PDLIM2-217ENST00000491330 MUTYHQ9UIF7 546 aa18.23■□□□□ 0.51
PDLIM2-217ENST00000491330 ADAM28Q9UKQ2 775 aa18.23■□□□□ 0.51
PDLIM2-217ENST00000491330 BRWD1Q9NSI6 2320 aa18.23■□□□□ 0.51
PDLIM2-217ENST00000491330 ARID2Q68CP9 1835 aa18.23■□□□□ 0.51
PDLIM2-217ENST00000491330 MYO7AQ13402 2215 aa18.22■□□□□ 0.51
PDLIM2-217ENST00000491330 VWA3AA6NCI4 1184 aa18.22■□□□□ 0.51
PDLIM2-217ENST00000491330 FAM86C2PA6NEL3 165 aa18.22■□□□□ 0.51
PDLIM2-217ENST00000491330 TRAPPC3O43617 180 aa18.22■□□□□ 0.51
PDLIM2-217ENST00000491330 CD2BP2O95400 341 aaKnown RBP18.22■□□□□ 0.51
PDLIM2-217ENST00000491330 C1RP00736 705 aa18.22■□□□□ 0.51
PDLIM2-217ENST00000491330 PEX3P56589 373 aa18.22■□□□□ 0.51
PDLIM2-217ENST00000491330 RBM10P98175 930 aaKnown RBP18.22■□□□□ 0.51
PDLIM2-217ENST00000491330 CYP26C1Q6V0L0 522 aa18.22■□□□□ 0.51
PDLIM2-217ENST00000491330 KHSRPQ92945 711 aaKnown RBP eCLIP18.22■□□□□ 0.51
PDLIM2-217ENST00000491330 PDZD7Q9H5P4 517 aa18.22■□□□□ 0.51
PDLIM2-217ENST00000491330 TMEM134Q9H6X4 195 aa18.22■□□□□ 0.51
PDLIM2-217ENST00000491330 LARSQ9P2J5 1176 aaKnown RBP18.22■□□□□ 0.51
PDLIM2-217ENST00000491330 E9PMD0 336 aa18.21■□□□□ 0.51
PDLIM2-217ENST00000491330 GLUD1P00367 558 aa18.21■□□□□ 0.51
PDLIM2-217ENST00000491330 SCP2P22307 547 aa18.21■□□□□ 0.51
PDLIM2-217ENST00000491330 ABCD1P33897 745 aa18.21■□□□□ 0.51
PDLIM2-217ENST00000491330 AFF1P51825 1210 aaKnown RBP18.21■□□□□ 0.51
PDLIM2-217ENST00000491330 HSP90AA2PQ14568 343 aaPredicted RBP18.21■□□□□ 0.51
PDLIM2-217ENST00000491330 SUGP1Q8IWZ8 645 aaKnown RBP18.21■□□□□ 0.51
PDLIM2-217ENST00000491330 TDRD5Q8NAT2 981 aaKnown RBP18.21■□□□□ 0.51
PDLIM2-217ENST00000491330 STAMQ92783 540 aa18.21■□□□□ 0.51
PDLIM2-217ENST00000491330 SLC38A7Q9NVC3 462 aa18.21■□□□□ 0.51
PDLIM2-217ENST00000491330 SNTG2Q9NY99 539 aa18.21■□□□□ 0.51
PDLIM2-217ENST00000491330 TNFSF13BQ9Y275 285 aa18.21■□□□□ 0.51
PDLIM2-217ENST00000491330 HIP1RO75146 1068 aa18.2■□□□□ 0.5
PDLIM2-217ENST00000491330 CNPP09543 421 aaKnown RBP18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms