RNA–Protein interactions for RNA: ENST00000490800.1

CLDN1-202, Transcript of claudin 1, humanhuman

TSL 2

Gene CLDN1, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1-202ENST00000490800 ECM1Q16610 540 aa8.38□□□□□ -1.07
CLDN1-202ENST00000490800 STX1AQ16623 288 aa8.38□□□□□ -1.07
CLDN1-202ENST00000490800 ZNF484Q5JVG2 852 aa8.38□□□□□ -1.07
CLDN1-202ENST00000490800 HYIQ5T013 277 aa8.38□□□□□ -1.07
CLDN1-202ENST00000490800 NT5DC1Q5TFE4 455 aa8.38□□□□□ -1.07
CLDN1-202ENST00000490800 LRCH2Q5VUJ6 765 aa8.38□□□□□ -1.07
CLDN1-202ENST00000490800 NCAPH2Q6IBW4 605 aa8.38□□□□□ -1.07
CLDN1-202ENST00000490800 B3GNT9Q6UX72 402 aa8.38□□□□□ -1.07
CLDN1-202ENST00000490800 KIAA0319LQ8IZA0 1049 aa8.38□□□□□ -1.07
CLDN1-202ENST00000490800 CRIPAKQ8N1N5 446 aa8.38□□□□□ -1.07
CLDN1-202ENST00000490800 RASSF8Q8NHQ8 419 aa8.38□□□□□ -1.07
CLDN1-202ENST00000490800 GADD45GIP1Q8TAE8 222 aaPredicted RBP8.38□□□□□ -1.07
CLDN1-202ENST00000490800 SPATA20Q8TB22 786 aa8.38□□□□□ -1.07
CLDN1-202ENST00000490800 CALML4Q96GE6 196 aa8.38□□□□□ -1.07
CLDN1-202ENST00000490800 RIT2Q99578 217 aa8.38□□□□□ -1.07
CLDN1-202ENST00000490800 FTHL17Q9BXU8 183 aa8.38□□□□□ -1.07
CLDN1-202ENST00000490800 CUEDC2Q9H467 287 aa8.38□□□□□ -1.07
CLDN1-202ENST00000490800 UBE2ZQ9H832 354 aaPredicted RBP8.38□□□□□ -1.07
CLDN1-202ENST00000490800 RC3H2Q9HBD1 1191 aaKnown RBP8.38□□□□□ -1.07
CLDN1-202ENST00000490800 TMPRSS4Q9NRS4 437 aa8.38□□□□□ -1.07
CLDN1-202ENST00000490800 BLOC1S4Q9NUP1 217 aa8.38□□□□□ -1.07
CLDN1-202ENST00000490800 GABBR1Q9UBS5 961 aa8.38□□□□□ -1.07
CLDN1-202ENST00000490800 NOC2LQ9Y3T9 749 aaKnown RBP8.38□□□□□ -1.07
CLDN1-202ENST00000490800 SAMM50Q9Y512 469 aa8.38□□□□□ -1.07
CLDN1-202ENST00000490800 PCDHA5Q9Y5H7 936 aa8.38□□□□□ -1.07
CLDN1-202ENST00000490800 PCDHA10Q9Y5I2 948 aa8.38□□□□□ -1.07
CLDN1-202ENST00000490800 TCF20Q9UGU0 1960 aaKnown RBP8.37□□□□□ -1.07
CLDN1-202ENST00000490800 IGSF9BQ9UPX0 1349 aa8.37□□□□□ -1.07
CLDN1-202ENST00000490800 KDM3AQ9Y4C1 1321 aa8.37□□□□□ -1.07
CLDN1-202ENST00000490800 ZBTB42B2RXF5 422 aa8.37□□□□□ -1.07
CLDN1-202ENST00000490800 BIN1O00499 593 aa8.37□□□□□ -1.07
CLDN1-202ENST00000490800 GRM6O15303 877 aa8.37□□□□□ -1.07
CLDN1-202ENST00000490800 GAS7O60861 476 aa8.37□□□□□ -1.07
CLDN1-202ENST00000490800 MED24O75448 989 aa8.37□□□□□ -1.07
CLDN1-202ENST00000490800 RPS6KA5O75582 802 aa8.37□□□□□ -1.07
CLDN1-202ENST00000490800 RB1P06400 928 aa8.37□□□□□ -1.07
CLDN1-202ENST00000490800 PSAPP07602 524 aa8.37□□□□□ -1.07
CLDN1-202ENST00000490800 SPATA31C1P0DKV0 1188 aa8.37□□□□□ -1.07
CLDN1-202ENST00000490800 IBSPP21815 317 aaPredicted RBP8.37□□□□□ -1.07
CLDN1-202ENST00000490800 CASP1P29466 404 aa8.37□□□□□ -1.07
CLDN1-202ENST00000490800 CTNNB1P35222 781 aa8.37□□□□□ -1.07
CLDN1-202ENST00000490800 CCT6AP40227 531 aaKnown RBP8.37□□□□□ -1.07
CLDN1-202ENST00000490800 NLRP12P59046 1061 aa8.37□□□□□ -1.07
CLDN1-202ENST00000490800 DHX9Q08211 1270 aaKnown RBP8.37□□□□□ -1.07
CLDN1-202ENST00000490800 ANO6Q4KMQ2 910 aa8.37□□□□□ -1.07
CLDN1-202ENST00000490800 TCEAL5Q5H9L2 206 aa8.37□□□□□ -1.07
CLDN1-202ENST00000490800 ZNF746Q6NUN9 644 aaPredicted RBP8.37□□□□□ -1.07
CLDN1-202ENST00000490800 EP400NLQ6ZTU2 488 aa8.37□□□□□ -1.07
CLDN1-202ENST00000490800 C11orf57Q6ZUT1 292 aaPredicted RBP8.37□□□□□ -1.07
CLDN1-202ENST00000490800 KCNK18Q7Z418 384 aa8.37□□□□□ -1.07
CLDN1-202ENST00000490800 ZNF598Q86UK7 904 aaKnown RBP8.37□□□□□ -1.07
CLDN1-202ENST00000490800 ANKMY2Q8IV38 441 aa8.37□□□□□ -1.07
CLDN1-202ENST00000490800 SMAP1Q8IYB5 467 aaPredicted RBP8.37□□□□□ -1.07
CLDN1-202ENST00000490800 CCDC116Q8IYX3 515 aa8.37□□□□□ -1.07
CLDN1-202ENST00000490800 TPCN2Q8NHX9 752 aa8.37□□□□□ -1.07
CLDN1-202ENST00000490800 ERMNQ8TAM6 284 aa8.37□□□□□ -1.07
CLDN1-202ENST00000490800 FAM200AQ8TCP9 573 aa8.37□□□□□ -1.07
CLDN1-202ENST00000490800 RAD54LQ92698 747 aa8.37□□□□□ -1.07
CLDN1-202ENST00000490800 STAMQ92783 540 aa8.37□□□□□ -1.07
CLDN1-202ENST00000490800 SMARCE1Q969G3 411 aa8.37□□□□□ -1.07
CLDN1-202ENST00000490800 CCDC34Q96HJ3 373 aa8.37□□□□□ -1.07
CLDN1-202ENST00000490800 CDK5RAP3Q96JB5 506 aa8.37□□□□□ -1.07
CLDN1-202ENST00000490800 PPP1R16BQ96T49 567 aa8.37□□□□□ -1.07
CLDN1-202ENST00000490800 POLR3CQ9BUI4 534 aaPredicted RBP8.37□□□□□ -1.07
CLDN1-202ENST00000490800 TEKT3Q9BXF9 490 aa8.37□□□□□ -1.07
CLDN1-202ENST00000490800 TMX1Q9H3N1 280 aa8.37□□□□□ -1.07
CLDN1-202ENST00000490800 UNC45AQ9H3U1 944 aa8.37□□□□□ -1.07
CLDN1-202ENST00000490800 EPHX3Q9H6B9 360 aa8.37□□□□□ -1.07
CLDN1-202ENST00000490800 GRPEL1Q9HAV7 217 aa8.37□□□□□ -1.07
CLDN1-202ENST00000490800 MAGEF1Q9HAY2 307 aa8.37□□□□□ -1.07
CLDN1-202ENST00000490800 KBTBD4Q9NVX7 518 aa8.37□□□□□ -1.07
CLDN1-202ENST00000490800 ANO10Q9NW15 660 aa8.37□□□□□ -1.07
CLDN1-202ENST00000490800 STK17AQ9UEE5 414 aa8.37□□□□□ -1.07
CLDN1-202ENST00000490800 MAN1B1Q9UKM7 699 aa8.37□□□□□ -1.07
CLDN1-202ENST00000490800 KAT6AQ92794 2004 aa8.37□□□□□ -1.07
CLDN1-202ENST00000490800 ADGRA3Q8IWK6 1321 aa8.36□□□□□ -1.07
CLDN1-202ENST00000490800 MICAL3Q7RTP6 2002 aa8.36□□□□□ -1.07
CLDN1-202ENST00000490800 C5orf67F2Z3F1 127 aa8.36□□□□□ -1.07
CLDN1-202ENST00000490800 H3BQ06 376 aaPredicted RBP8.36□□□□□ -1.07
CLDN1-202ENST00000490800 CHMP2AO43633 222 aa8.36□□□□□ -1.07
CLDN1-202ENST00000490800 MGEA5O60502 916 aa8.36□□□□□ -1.07
CLDN1-202ENST00000490800 CSPG5O95196 566 aa8.36□□□□□ -1.07
CLDN1-202ENST00000490800 SMC2O95347 1197 aa8.36□□□□□ -1.07
CLDN1-202ENST00000490800 C22orf31O95567 290 aa8.36□□□□□ -1.07
CLDN1-202ENST00000490800 STAG3L1P0CL83 205 aa8.36□□□□□ -1.07
CLDN1-202ENST00000490800 IL9P15248 144 aa8.36□□□□□ -1.07
CLDN1-202ENST00000490800 BMP6P22004 513 aa8.36□□□□□ -1.07
CLDN1-202ENST00000490800 RPA1P27694 616 aa8.36□□□□□ -1.07
CLDN1-202ENST00000490800 MRE11P49959 708 aa8.36□□□□□ -1.07
CLDN1-202ENST00000490800 GATMP50440 423 aa8.36□□□□□ -1.07
CLDN1-202ENST00000490800 CUL4BQ13620 913 aa8.36□□□□□ -1.07
CLDN1-202ENST00000490800 MORC3Q14149 939 aa8.36□□□□□ -1.07
CLDN1-202ENST00000490800 EPHA7Q15375 998 aa8.36□□□□□ -1.07
CLDN1-202ENST00000490800 KIZQ2M2Z5 673 aa8.36□□□□□ -1.07
CLDN1-202ENST00000490800 LEXMQ3ZCV2 418 aa8.36□□□□□ -1.07
CLDN1-202ENST00000490800 PAN2Q504Q3 1202 aaKnown RBP8.36□□□□□ -1.07
CLDN1-202ENST00000490800 TIGD5Q53EQ6 642 aa8.36□□□□□ -1.07
CLDN1-202ENST00000490800 PPP1R26Q5T8A7 1209 aaPredicted RBP8.36□□□□□ -1.07
CLDN1-202ENST00000490800 HAUS3Q68CZ6 603 aa8.36□□□□□ -1.07
CLDN1-202ENST00000490800 CATSPER3Q86XQ3 398 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms