RNA–Protein interactions for RNA: ENST00000490564.1

NINJ1-205, Transcript of ninjurin 1, humanhuman

TSL 1 (best)

Gene NINJ1, Length 488 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NINJ1-205ENST00000490564 LIG1P18858 919 aa11.51□□□□□ -0.57
NINJ1-205ENST00000490564 AKAP5P24588 427 aa11.51□□□□□ -0.57
NINJ1-205ENST00000490564 NDUFV1P49821 464 aa11.51□□□□□ -0.57
NINJ1-205ENST00000490564 SCNN1GP51170 649 aa11.51□□□□□ -0.57
NINJ1-205ENST00000490564 DSC1Q08554 894 aa11.51□□□□□ -0.57
NINJ1-205ENST00000490564 COASYQ13057 564 aa11.51□□□□□ -0.57
NINJ1-205ENST00000490564 KCNC3Q14003 757 aa11.51□□□□□ -0.57
NINJ1-205ENST00000490564 BMS1Q14692 1282 aaKnown RBP11.51□□□□□ -0.57
NINJ1-205ENST00000490564 TMEM132AQ24JP5 1023 aa11.51□□□□□ -0.57
NINJ1-205ENST00000490564 DCAF4L1Q3SXM0 396 aa11.51□□□□□ -0.57
NINJ1-205ENST00000490564 NT5DC1Q5TFE4 455 aa11.51□□□□□ -0.57
NINJ1-205ENST00000490564 FAM173BQ6P4H8 233 aa11.51□□□□□ -0.57
NINJ1-205ENST00000490564 TMEM184AQ6ZMB5 413 aa11.51□□□□□ -0.57
NINJ1-205ENST00000490564 TMC7Q7Z402 723 aa11.51□□□□□ -0.57
NINJ1-205ENST00000490564 MRPL43Q8N983 215 aaKnown RBP11.51□□□□□ -0.57
NINJ1-205ENST00000490564 ZFP42Q96MM3 310 aa11.51□□□□□ -0.57
NINJ1-205ENST00000490564 NTPCRQ9BSD7 190 aaKnown RBP11.51□□□□□ -0.57
NINJ1-205ENST00000490564 CCSER1Q9C0I3 900 aa11.51□□□□□ -0.57
NINJ1-205ENST00000490564 KMT5AQ9NQR1 393 aa11.51□□□□□ -0.57
NINJ1-205ENST00000490564 BLOC1S4Q9NUP1 217 aa11.51□□□□□ -0.57
NINJ1-205ENST00000490564 CLEC1BQ9P126 229 aa11.51□□□□□ -0.57
NINJ1-205ENST00000490564 PARP2Q9UGN5 583 aa11.51□□□□□ -0.57
NINJ1-205ENST00000490564 KCNG1Q9UIX4 513 aa11.51□□□□□ -0.57
NINJ1-205ENST00000490564 CD207Q9UJ71 328 aa11.51□□□□□ -0.57
NINJ1-205ENST00000490564 FBXO2Q9UK22 296 aaPredicted RBP11.51□□□□□ -0.57
NINJ1-205ENST00000490564 FAM50BQ9Y247 325 aa11.51□□□□□ -0.57
NINJ1-205ENST00000490564 FAN1Q9Y2M0 1017 aa11.51□□□□□ -0.57
NINJ1-205ENST00000490564 SRPRBQ9Y5M8 271 aaKnown RBP11.51□□□□□ -0.57
NINJ1-205ENST00000490564 IRAK3Q9Y616 596 aa11.51□□□□□ -0.57
NINJ1-205ENST00000490564 NCOR1O75376 2440 aa11.5□□□□□ -0.57
NINJ1-205ENST00000490564 SFI1A8K8P3 1242 aa11.5□□□□□ -0.57
NINJ1-205ENST00000490564 SSBP05455 408 aaKnown RBP eCLIP11.5□□□□□ -0.57
NINJ1-205ENST00000490564 PLS3P13797 630 aa11.5□□□□□ -0.57
NINJ1-205ENST00000490564 PLCG1P19174 1290 aa11.5□□□□□ -0.57
NINJ1-205ENST00000490564 GRIK3Q13003 919 aa11.5□□□□□ -0.57
NINJ1-205ENST00000490564 SMAD4Q13485 552 aaKnown RBP11.5□□□□□ -0.57
NINJ1-205ENST00000490564 GIT2Q14161 759 aa11.5□□□□□ -0.57
NINJ1-205ENST00000490564 KARSQ15046 597 aaKnown RBP11.5□□□□□ -0.57
NINJ1-205ENST00000490564 ARSHQ5FYA8 562 aa11.5□□□□□ -0.57
NINJ1-205ENST00000490564 ATF7IP2Q5U623 682 aa11.5□□□□□ -0.57
NINJ1-205ENST00000490564 EEF1DP3Q658K8 133 aa11.5□□□□□ -0.57
NINJ1-205ENST00000490564 TAS1R3Q7RTX0 852 aa11.5□□□□□ -0.57
NINJ1-205ENST00000490564 FAM178BQ8IXR5 827 aa11.5□□□□□ -0.57
NINJ1-205ENST00000490564 VPS52Q8N1B4 723 aa11.5□□□□□ -0.57
NINJ1-205ENST00000490564 VN1R2Q8NFZ6 395 aa11.5□□□□□ -0.57
NINJ1-205ENST00000490564 SPIRE2Q8WWL2 714 aa11.5□□□□□ -0.57
NINJ1-205ENST00000490564 RAD54LQ92698 747 aa11.5□□□□□ -0.57
NINJ1-205ENST00000490564 USP28Q96RU2 1077 aa11.5□□□□□ -0.57
NINJ1-205ENST00000490564 ACO2Q99798 780 aaKnown RBP11.5□□□□□ -0.57
NINJ1-205ENST00000490564 VN1R3Q9BXE9 311 aa11.5□□□□□ -0.57
NINJ1-205ENST00000490564 MARCH5Q9NX47 278 aa11.5□□□□□ -0.57
NINJ1-205ENST00000490564 SNTG2Q9NY99 539 aa11.5□□□□□ -0.57
NINJ1-205ENST00000490564 KLK14Q9P0G3 267 aa11.5□□□□□ -0.57
NINJ1-205ENST00000490564 BARX2Q9UMQ3 279 aaPredicted RBP11.5□□□□□ -0.57
NINJ1-205ENST00000490564 TNFSF13BQ9Y275 285 aa11.5□□□□□ -0.57
NINJ1-205ENST00000490564 USP20Q9Y2K6 914 aa11.5□□□□□ -0.57
NINJ1-205ENST00000490564 RBM19Q9Y4C8 960 aaKnown RBP11.5□□□□□ -0.57
NINJ1-205ENST00000490564 PLXNA3P51805 1871 aa11.5□□□□□ -0.57
NINJ1-205ENST00000490564 CITO14578 2027 aa11.5□□□□□ -0.57
NINJ1-205ENST00000490564 NPHP3-ACAD11A0A0J9YXS1 232 aa11.49□□□□□ -0.57
NINJ1-205ENST00000490564 SLC16A4O15374 487 aa11.49□□□□□ -0.57
NINJ1-205ENST00000490564 RECQL4O94761 1208 aa11.49□□□□□ -0.57
NINJ1-205ENST00000490564 CXCL14O95715 111 aa11.49□□□□□ -0.57
NINJ1-205ENST00000490564 EFEMP2O95967 443 aa11.49□□□□□ -0.57
NINJ1-205ENST00000490564 SRGAP2BP0DMP2 458 aa11.49□□□□□ -0.57
NINJ1-205ENST00000490564 PDIA4P13667 645 aaKnown RBP11.49□□□□□ -0.57
NINJ1-205ENST00000490564 MARCKSP29966 332 aaPredicted RBP11.49□□□□□ -0.57
NINJ1-205ENST00000490564 OR1G1P47890 313 aa11.49□□□□□ -0.57
NINJ1-205ENST00000490564 NASPP49321 788 aaPredicted RBP11.49□□□□□ -0.57
NINJ1-205ENST00000490564 RBM10P98175 930 aaKnown RBP11.49□□□□□ -0.57
NINJ1-205ENST00000490564 RAD51AP2Q09MP3 1159 aa11.49□□□□□ -0.57
NINJ1-205ENST00000490564 SMAD2Q15796 467 aaKnown RBP11.49□□□□□ -0.57
NINJ1-205ENST00000490564 CLUL1Q15846 466 aa11.49□□□□□ -0.57
NINJ1-205ENST00000490564 APBB1IPQ7Z5R6 666 aaPredicted RBP11.49□□□□□ -0.57
NINJ1-205ENST00000490564 RNF168Q8IYW5 571 aaPredicted RBP11.49□□□□□ -0.57
NINJ1-205ENST00000490564 SMRP1Q8NCR6 262 aa11.49□□□□□ -0.57
NINJ1-205ENST00000490564 TMEM161BQ8NDZ6 487 aa11.49□□□□□ -0.57
NINJ1-205ENST00000490564 RASSF8Q8NHQ8 419 aa11.49□□□□□ -0.57
NINJ1-205ENST00000490564 KCNN1Q92952 543 aa11.49□□□□□ -0.57
NINJ1-205ENST00000490564 EPSTI1Q96J88 318 aa11.49□□□□□ -0.57
NINJ1-205ENST00000490564 RPS6KC1Q96S38 1066 aa11.49□□□□□ -0.57
NINJ1-205ENST00000490564 HERC2P3Q9BVR0 1158 aa11.49□□□□□ -0.57
NINJ1-205ENST00000490564 MRPL4Q9BYD3 311 aaKnown RBP11.49□□□□□ -0.57
NINJ1-205ENST00000490564 CXCL16Q9H2A7 254 aa11.49□□□□□ -0.57
NINJ1-205ENST00000490564 PTPRHQ9HD43 1115 aa11.49□□□□□ -0.57
NINJ1-205ENST00000490564 PRKAG3Q9UGI9 489 aa11.49□□□□□ -0.57
NINJ1-205ENST00000490564 ODF2LQ9ULJ1 636 aa11.49□□□□□ -0.57
NINJ1-205ENST00000490564 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.48□□□□□ -0.57
NINJ1-205ENST00000490564 ABLIM1O14639 778 aa11.48□□□□□ -0.57
NINJ1-205ENST00000490564 PTGESO14684 152 aa11.48□□□□□ -0.57
NINJ1-205ENST00000490564 CLASP2O75122 1294 aaKnown RBP11.48□□□□□ -0.57
NINJ1-205ENST00000490564 NR1I2O75469 434 aa11.48□□□□□ -0.57
NINJ1-205ENST00000490564 SOD2P04179 222 aa11.48□□□□□ -0.57
NINJ1-205ENST00000490564 MAPTP10636 758 aaKnown RBP11.48□□□□□ -0.57
NINJ1-205ENST00000490564 PROZP22891 400 aa11.48□□□□□ -0.57
NINJ1-205ENST00000490564 DDIT3P35638 169 aa11.48□□□□□ -0.57
NINJ1-205ENST00000490564 GRM5P41594 1212 aa11.48□□□□□ -0.57
NINJ1-205ENST00000490564 ZNF131P52739 623 aa11.48□□□□□ -0.57
NINJ1-205ENST00000490564 SMTNP53814 917 aa11.48□□□□□ -0.57
NINJ1-205ENST00000490564 NCKAP1LP55160 1127 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms