RNA–Protein interactions for RNA: ENST00000490539.1

CSTF1-205, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 5

Gene CSTF1, Length 929 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-205ENST00000490539 CACNA1BQ00975 2339 aa5.52□□□□□ -1.53
CSTF1-205ENST00000490539 ADAMTSL1Q8N6G6 1762 aa5.52□□□□□ -1.53
CSTF1-205ENST00000490539 ARAP2Q8WZ64 1704 aa5.51□□□□□ -1.53
CSTF1-205ENST00000490539 GOLGA6L3A6NEY3 463 aa5.51□□□□□ -1.53
CSTF1-205ENST00000490539 MANSC4A6NHS7 340 aaPredicted RBP5.51□□□□□ -1.53
CSTF1-205ENST00000490539 NPIPB6E9PJ23 425 aa5.51□□□□□ -1.53
CSTF1-205ENST00000490539 MEFVO15553 781 aaPredicted RBP5.51□□□□□ -1.53
CSTF1-205ENST00000490539 SMARCA5O60264 1052 aaPredicted RBP5.51□□□□□ -1.53
CSTF1-205ENST00000490539 EFEMP2O95967 443 aa5.51□□□□□ -1.53
CSTF1-205ENST00000490539 THBDP07204 575 aa5.51□□□□□ -1.53
CSTF1-205ENST00000490539 PFKLP17858 780 aa5.51□□□□□ -1.53
CSTF1-205ENST00000490539 PTMSP20962 102 aa5.51□□□□□ -1.53
CSTF1-205ENST00000490539 CACNB3P54284 484 aa5.51□□□□□ -1.53
CSTF1-205ENST00000490539 KCNAB2Q13303 367 aa5.51□□□□□ -1.53
CSTF1-205ENST00000490539 ARHGEF6Q15052 776 aa5.51□□□□□ -1.53
CSTF1-205ENST00000490539 TARBP2Q15633 366 aaKnown RBP5.51□□□□□ -1.53
CSTF1-205ENST00000490539 RPTNQ6XPR3 784 aa5.51□□□□□ -1.53
CSTF1-205ENST00000490539 TICAM2Q86XR7 235 aa5.51□□□□□ -1.53
CSTF1-205ENST00000490539 HSCBQ8IWL3 235 aa5.51□□□□□ -1.53
CSTF1-205ENST00000490539 LRRC47Q8N1G4 583 aaKnown RBP5.51□□□□□ -1.53
CSTF1-205ENST00000490539 CELF2-AS1Q8N7Q2 184 aa5.51□□□□□ -1.53
CSTF1-205ENST00000490539 KCTD13Q8WZ19 329 aa5.51□□□□□ -1.53
CSTF1-205ENST00000490539 DIO2Q92813 273 aa5.51□□□□□ -1.53
CSTF1-205ENST00000490539 PEX11GQ96HA9 241 aa5.51□□□□□ -1.53
CSTF1-205ENST00000490539 WRNIP1Q96S55 665 aa5.51□□□□□ -1.53
CSTF1-205ENST00000490539 FSD1Q9BTV5 496 aa5.51□□□□□ -1.53
CSTF1-205ENST00000490539 NACAP1Q9BZK3 213 aa5.51□□□□□ -1.53
CSTF1-205ENST00000490539 XPO5Q9HAV4 1204 aaKnown RBP eCLIP5.51□□□□□ -1.53
CSTF1-205ENST00000490539 ZNF287Q9HBT7 754 aa5.51□□□□□ -1.53
CSTF1-205ENST00000490539 CD320Q9NPF0 282 aa5.51□□□□□ -1.53
CSTF1-205ENST00000490539 PI4KBQ9UBF8 816 aa5.51□□□□□ -1.53
CSTF1-205ENST00000490539 HERC5Q9UII4 1024 aaKnown RBP5.51□□□□□ -1.53
CSTF1-205ENST00000490539 SCAF8Q9UPN6 1271 aaKnown RBP5.51□□□□□ -1.53
CSTF1-205ENST00000490539 RWDD3Q9Y3V2 267 aa5.51□□□□□ -1.53
CSTF1-205ENST00000490539 RPAP1Q9BWH6 1393 aaPredicted RBP5.51□□□□□ -1.53
CSTF1-205ENST00000490539 PAPPA2Q9BXP8 1791 aa5.5□□□□□ -1.53
CSTF1-205ENST00000490539 PRUNE2Q8WUY3 3088 aa5.5□□□□□ -1.53
CSTF1-205ENST00000490539 C7orf72A4D263 438 aa5.5□□□□□ -1.53
CSTF1-205ENST00000490539 H0YGN5 161 aa5.5□□□□□ -1.53
CSTF1-205ENST00000490539 HIP1O00291 1037 aa5.5□□□□□ -1.53
CSTF1-205ENST00000490539 N4BP3O15049 544 aa5.5□□□□□ -1.53
CSTF1-205ENST00000490539 NUAK1O60285 661 aa5.5□□□□□ -1.53
CSTF1-205ENST00000490539 EIF5BO60841 1220 aaKnown RBP5.5□□□□□ -1.53
CSTF1-205ENST00000490539 APPP05067 770 aa5.5□□□□□ -1.53
CSTF1-205ENST00000490539 SCG5P05408 212 aa5.5□□□□□ -1.53
CSTF1-205ENST00000490539 SLC3A2P08195 630 aaKnown RBP5.5□□□□□ -1.53
CSTF1-205ENST00000490539 DBHP09172 617 aa5.5□□□□□ -1.53
CSTF1-205ENST00000490539 MSL3P1P0C860 447 aa5.5□□□□□ -1.53
CSTF1-205ENST00000490539 CETPP11597 493 aa5.5□□□□□ -1.53
CSTF1-205ENST00000490539 PDE6AP16499 860 aa5.5□□□□□ -1.53
CSTF1-205ENST00000490539 GNAT2P19087 354 aa5.5□□□□□ -1.53
CSTF1-205ENST00000490539 DDIT3P35638 169 aa5.5□□□□□ -1.53
CSTF1-205ENST00000490539 RPL11P62913 178 aaKnown RBP5.5□□□□□ -1.53
CSTF1-205ENST00000490539 NUCB1Q02818 461 aa5.5□□□□□ -1.53
CSTF1-205ENST00000490539 SNAPC2Q13487 334 aa5.5□□□□□ -1.53
CSTF1-205ENST00000490539 SLC9A5Q14940 896 aa5.5□□□□□ -1.53
CSTF1-205ENST00000490539 UBE3CQ15386 1083 aa5.5□□□□□ -1.53
CSTF1-205ENST00000490539 SLC10A6Q3KNW5 377 aa5.5□□□□□ -1.53
CSTF1-205ENST00000490539 MRM1Q6IN84 353 aaKnown RBP5.5□□□□□ -1.53
CSTF1-205ENST00000490539 MIGA2Q7L4E1 593 aa5.5□□□□□ -1.53
CSTF1-205ENST00000490539 CTU1Q7Z7A3 348 aaKnown RBP5.5□□□□□ -1.53
CSTF1-205ENST00000490539 CHD1LQ86WJ1 897 aa5.5□□□□□ -1.53
CSTF1-205ENST00000490539 ERO1BQ86YB8 467 aa5.5□□□□□ -1.53
CSTF1-205ENST00000490539 FOXP4Q8IVH2 680 aaPredicted RBP5.5□□□□□ -1.53
CSTF1-205ENST00000490539 TMEM151BQ8IW70 566 aa5.5□□□□□ -1.53
CSTF1-205ENST00000490539 MIGA1Q8NAN2 632 aa5.5□□□□□ -1.53
CSTF1-205ENST00000490539 NETO2Q8NC67 525 aa5.5□□□□□ -1.53
CSTF1-205ENST00000490539 SH3RF3Q8TEJ3 882 aaPredicted RBP5.5□□□□□ -1.53
CSTF1-205ENST00000490539 MZB1Q8WU39 189 aa5.5□□□□□ -1.53
CSTF1-205ENST00000490539 TGFBRAP1Q8WUH2 860 aa5.5□□□□□ -1.53
CSTF1-205ENST00000490539 ZNF669Q96BR6 464 aaPredicted RBP5.5□□□□□ -1.53
CSTF1-205ENST00000490539 EVI5LQ96CN4 794 aa5.5□□□□□ -1.53
CSTF1-205ENST00000490539 SIGLEC10Q96LC7 697 aa5.5□□□□□ -1.53
CSTF1-205ENST00000490539 SGPP1Q9BX95 441 aa5.5□□□□□ -1.53
CSTF1-205ENST00000490539 KRTAP9-8Q9BYQ0 159 aa5.5□□□□□ -1.53
CSTF1-205ENST00000490539 PRO3102Q9H379 93 aa5.5□□□□□ -1.53
CSTF1-205ENST00000490539 AS3MTQ9HBK9 375 aa5.5□□□□□ -1.53
CSTF1-205ENST00000490539 PIH1D3Q9NQM4 214 aaKnown RBP5.5□□□□□ -1.53
CSTF1-205ENST00000490539 GULP1Q9UBP9 304 aa5.5□□□□□ -1.53
CSTF1-205ENST00000490539 MBD1Q9UIS9 605 aaPredicted RBP5.5□□□□□ -1.53
CSTF1-205ENST00000490539 PCDHAC2Q9Y5I4 1007 aa5.5□□□□□ -1.53
CSTF1-205ENST00000490539 TIMM13Q9Y5L4 95 aaPredicted RBP5.5□□□□□ -1.53
CSTF1-205ENST00000490539 ECM29Q5VYK3 1845 aa5.5□□□□□ -1.53
CSTF1-205ENST00000490539 MYH2Q9UKX2 1941 aa5.5□□□□□ -1.53
CSTF1-205ENST00000490539 AOX1Q06278 1338 aa5.49□□□□□ -1.53
CSTF1-205ENST00000490539 ZNF532Q9HCE3 1301 aa5.49□□□□□ -1.53
CSTF1-205ENST00000490539 RNF113AO15541 343 aaKnown RBP5.49□□□□□ -1.53
CSTF1-205ENST00000490539 CTNND1O60716 968 aaKnown RBP5.49□□□□□ -1.53
CSTF1-205ENST00000490539 FUCA1P04066 466 aa5.49□□□□□ -1.53
CSTF1-205ENST00000490539 ASNSP08243 561 aa5.49□□□□□ -1.53
CSTF1-205ENST00000490539 INHBBP09529 407 aa5.49□□□□□ -1.53
CSTF1-205ENST00000490539 MRE11P49959 708 aa5.49□□□□□ -1.53
CSTF1-205ENST00000490539 LINC00310P59036 64 aa5.49□□□□□ -1.53
CSTF1-205ENST00000490539 PPP2R2AP63151 447 aa5.49□□□□□ -1.53
CSTF1-205ENST00000490539 KIF23Q02241 960 aaPredicted RBP5.49□□□□□ -1.53
CSTF1-205ENST00000490539 PPATQ06203 517 aa5.49□□□□□ -1.53
CSTF1-205ENST00000490539 PABPC4Q13310 644 aaKnown RBP eCLIP5.49□□□□□ -1.53
CSTF1-205ENST00000490539 VGLL4Q14135 290 aa5.49□□□□□ -1.53
CSTF1-205ENST00000490539 PLEKHN1Q494U1 663 aaPredicted RBP5.49□□□□□ -1.53
CSTF1-205ENST00000490539 ACBD5Q5T8D3 534 aaPredicted RBP5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms