RNA–Protein interactions for RNA: ENST00000490504.5

PCCB-218, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 3 BASIC

Gene PCCB, Length 1,613 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-218ENST00000490504 KSR1Q8IVT5 923 aa17.18■□□□□ 0.34
PCCB-218ENST00000490504 VSTM4Q8IW00 320 aa17.18■□□□□ 0.34
PCCB-218ENST00000490504 C4orf19Q8IY42 314 aa17.18■□□□□ 0.34
PCCB-218ENST00000490504 GUF1Q8N442 669 aaKnown RBP17.18■□□□□ 0.34
PCCB-218ENST00000490504 ANKRD20A12PQ8NF67 263 aa17.18■□□□□ 0.34
PCCB-218ENST00000490504 NOC3LQ8WTT2 800 aaKnown RBP17.18■□□□□ 0.34
PCCB-218ENST00000490504 HPS3Q969F9 1004 aa17.18■□□□□ 0.34
PCCB-218ENST00000490504 CEP170P1Q96L14 293 aa17.18■□□□□ 0.34
PCCB-218ENST00000490504 NACC1Q96RE7 527 aa17.18■□□□□ 0.34
PCCB-218ENST00000490504 C11orf84Q9BUA3 381 aaPredicted RBP17.18■□□□□ 0.34
PCCB-218ENST00000490504 INTS13Q9NVM9 706 aa17.18■□□□□ 0.34
PCCB-218ENST00000490504 MYH11P35749 1972 aa17.18■□□□□ 0.34
PCCB-218ENST00000490504 A0A087WZ62 844 aa17.18■□□□□ 0.34
PCCB-218ENST00000490504 NPHP3-ACAD11A0A0J9YXS1 232 aa17.18■□□□□ 0.34
PCCB-218ENST00000490504 A0A1B0GTH6 734 aa17.18■□□□□ 0.34
PCCB-218ENST00000490504 YWHABP31946 246 aaKnown RBP17.18■□□□□ 0.34
PCCB-218ENST00000490504 PMS1P54277 932 aaKnown RBP17.18■□□□□ 0.34
PCCB-218ENST00000490504 FAM26FQ5R3K3 315 aa17.18■□□□□ 0.34
PCCB-218ENST00000490504 RHPN2Q8IUC4 686 aa17.18■□□□□ 0.34
PCCB-218ENST00000490504 ADAMTS19Q8TE59 1207 aa17.18■□□□□ 0.34
PCCB-218ENST00000490504 FDXACB1Q9BRP7 624 aaPredicted RBP17.18■□□□□ 0.34
PCCB-218ENST00000490504 PLVAPQ9BX97 442 aa17.18■□□□□ 0.34
PCCB-218ENST00000490504 GCOM2Q9BZD3 368 aaPredicted RBP17.18■□□□□ 0.34
PCCB-218ENST00000490504 BHMT2Q9H2M3 363 aa17.18■□□□□ 0.34
PCCB-218ENST00000490504 THAP9Q9H5L6 903 aa17.18■□□□□ 0.34
PCCB-218ENST00000490504 ZSWIM4Q9H7M6 989 aa17.18■□□□□ 0.34
PCCB-218ENST00000490504 LIMA1Q9UHB6 759 aaKnown RBP17.18■□□□□ 0.34
PCCB-218ENST00000490504 MYH9P35579 1960 aaKnown RBP17.17■□□□□ 0.34
PCCB-218ENST00000490504 TBKBP1A7MCY6 615 aa17.17■□□□□ 0.34
PCCB-218ENST00000490504 FGFR1P11362 822 aa17.17■□□□□ 0.34
PCCB-218ENST00000490504 ZSCAN20P17040 1043 aaPredicted RBP17.17■□□□□ 0.34
PCCB-218ENST00000490504 CDC42EP1Q00587 391 aa17.17■□□□□ 0.34
PCCB-218ENST00000490504 AAK1Q2M2I8 961 aa17.17■□□□□ 0.34
PCCB-218ENST00000490504 FILIP1LQ4L180 1135 aa17.17■□□□□ 0.34
PCCB-218ENST00000490504 TCEAL5Q5H9L2 206 aa17.17■□□□□ 0.34
PCCB-218ENST00000490504 APTXQ7Z2E3 356 aaKnown RBP17.17■□□□□ 0.34
PCCB-218ENST00000490504 JPH2Q9BR39 696 aaPredicted RBP17.17■□□□□ 0.34
PCCB-218ENST00000490504 DHX33Q9H6R0 707 aaKnown RBP17.17■□□□□ 0.34
PCCB-218ENST00000490504 ATP6V0A4Q9HBG4 840 aa17.17■□□□□ 0.34
PCCB-218ENST00000490504 ALG13Q9NP73 1137 aaKnown RBP17.17■□□□□ 0.34
PCCB-218ENST00000490504 TMEM161AQ9NX61 479 aa17.17■□□□□ 0.34
PCCB-218ENST00000490504 PLAGL2Q9UPG8 496 aa17.17■□□□□ 0.34
PCCB-218ENST00000490504 EVPLQ92817 2033 aa17.17■□□□□ 0.34
PCCB-218ENST00000490504 KCNJ18B7U540 433 aa17.16■□□□□ 0.34
PCCB-218ENST00000490504 GIT2Q14161 759 aa17.16■□□□□ 0.34
PCCB-218ENST00000490504 KCNJ12Q14500 433 aa17.16■□□□□ 0.34
PCCB-218ENST00000490504 NR1I3Q14994 352 aa17.16■□□□□ 0.34
PCCB-218ENST00000490504 TIGD5Q53EQ6 642 aa17.16■□□□□ 0.34
PCCB-218ENST00000490504 TCP11X2Q5H9J9 407 aa17.16■□□□□ 0.34
PCCB-218ENST00000490504 CENPPQ6IPU0 288 aa17.16■□□□□ 0.34
PCCB-218ENST00000490504 PIGOQ8TEQ8 1089 aa17.16■□□□□ 0.34
PCCB-218ENST00000490504 TMEM143Q96AN5 459 aa17.16■□□□□ 0.34
PCCB-218ENST00000490504 DUSP9Q99956 384 aaKnown RBP17.16■□□□□ 0.34
PCCB-218ENST00000490504 ELAC1Q9H777 363 aaKnown RBP17.16■□□□□ 0.34
PCCB-218ENST00000490504 RNF19AQ9NV58 838 aa17.16■□□□□ 0.34
PCCB-218ENST00000490504 HCSTQ9UBK5 93 aa17.16■□□□□ 0.34
PCCB-218ENST00000490504 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.15■□□□□ 0.34
PCCB-218ENST00000490504 ZNF500O60304 480 aaPredicted RBP17.15■□□□□ 0.34
PCCB-218ENST00000490504 CSPG5O95196 566 aa17.15■□□□□ 0.34
PCCB-218ENST00000490504 ITGB1P05556 798 aa17.15■□□□□ 0.34
PCCB-218ENST00000490504 POLGP54098 1239 aaPredicted RBP17.15■□□□□ 0.34
PCCB-218ENST00000490504 RAD51AP2Q09MP3 1159 aa17.15■□□□□ 0.34
PCCB-218ENST00000490504 CAMK1Q14012 370 aa17.15■□□□□ 0.34
PCCB-218ENST00000490504 KRT31Q15323 416 aa17.15■□□□□ 0.34
PCCB-218ENST00000490504 XKR9Q5GH70 373 aa17.15■□□□□ 0.34
PCCB-218ENST00000490504 HERC4Q5GLZ8 1057 aaPredicted RBP17.15■□□□□ 0.34
PCCB-218ENST00000490504 ANKRD40Q6AI12 368 aa17.15■□□□□ 0.34
PCCB-218ENST00000490504 FOXR2Q6PJQ5 311 aa17.15■□□□□ 0.34
PCCB-218ENST00000490504 OTUD6AQ7L8S5 288 aa17.15■□□□□ 0.34
PCCB-218ENST00000490504 ZNF410Q86VK4 478 aa17.15■□□□□ 0.34
PCCB-218ENST00000490504 ECHDC2Q86YB7 292 aa17.15■□□□□ 0.34
PCCB-218ENST00000490504 CSGALNACT2Q8N6G5 542 aa17.15■□□□□ 0.34
PCCB-218ENST00000490504 KLHL23Q8NBE8 558 aa17.15■□□□□ 0.34
PCCB-218ENST00000490504 CCDC150Q8NCX0 1101 aa17.15■□□□□ 0.34
PCCB-218ENST00000490504 CACTINQ8WUQ7 758 aaKnown RBP17.15■□□□□ 0.34
PCCB-218ENST00000490504 SLC7A3Q8WY07 619 aa17.15■□□□□ 0.34
PCCB-218ENST00000490504 NLRP4Q96MN2 994 aa17.15■□□□□ 0.34
PCCB-218ENST00000490504 NECAB3Q96P71 396 aaPredicted RBP17.15■□□□□ 0.34
PCCB-218ENST00000490504 REEP2Q9BRK0 252 aa17.15■□□□□ 0.34
PCCB-218ENST00000490504 RUSC1Q9BVN2 902 aa17.15■□□□□ 0.34
PCCB-218ENST00000490504 SRRTQ9BXP5 876 aaKnown RBP17.15■□□□□ 0.34
PCCB-218ENST00000490504 LMAN2LQ9H0V9 348 aa17.15■□□□□ 0.34
PCCB-218ENST00000490504 UBE2ZQ9H832 354 aaPredicted RBP17.15■□□□□ 0.34
PCCB-218ENST00000490504 RNF216Q9NWF9 866 aaPredicted RBP17.15■□□□□ 0.34
PCCB-218ENST00000490504 PPME1Q9Y570 386 aa17.15■□□□□ 0.34
PCCB-218ENST00000490504 LRRC10BA6NIK2 292 aa17.14■□□□□ 0.33
PCCB-218ENST00000490504 KIF20AO95235 890 aa17.14■□□□□ 0.33
PCCB-218ENST00000490504 DNAJB1P25685 340 aa17.14■□□□□ 0.33
PCCB-218ENST00000490504 EEF1GP26641 437 aaKnown RBP17.14■□□□□ 0.33
PCCB-218ENST00000490504 RFC5P40937 340 aa17.14■□□□□ 0.33
PCCB-218ENST00000490504 CACNB1Q02641 598 aaPredicted RBP17.14■□□□□ 0.33
PCCB-218ENST00000490504 RINT1Q6NUQ1 792 aa17.14■□□□□ 0.33
PCCB-218ENST00000490504 FAM114A1Q8IWE2 563 aa17.14■□□□□ 0.33
PCCB-218ENST00000490504 LRRC8AQ8IWT6 810 aa17.14■□□□□ 0.33
PCCB-218ENST00000490504 SPPL3Q8TCT6 385 aa17.14■□□□□ 0.33
PCCB-218ENST00000490504 PRPF31Q8WWY3 499 aaKnown RBP17.14■□□□□ 0.33
PCCB-218ENST00000490504 UHRF1Q96T88 793 aaPredicted RBP17.14■□□□□ 0.33
PCCB-218ENST00000490504 NSUN3Q9H649 340 aaKnown RBP17.14■□□□□ 0.33
PCCB-218ENST00000490504 TYW1Q9NV66 732 aaKnown RBP17.14■□□□□ 0.33
PCCB-218ENST00000490504 KCND2Q9NZV8 630 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms