RNA–Protein interactions for RNA: ENST00000490475.1

TTC28-207, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 5

Gene TTC28, Length 724 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-207ENST00000490475 STAMQ92783 540 aa11.47□□□□□ -0.57
TTC28-207ENST00000490475 ASIC4Q96FT7 647 aa11.47□□□□□ -0.57
TTC28-207ENST00000490475 HERC2P3Q9BVR0 1158 aa11.47□□□□□ -0.57
TTC28-207ENST00000490475 APOL5Q9BWW9 433 aa11.47□□□□□ -0.57
TTC28-207ENST00000490475 XPNPEP1Q9NQW7 623 aa11.47□□□□□ -0.57
TTC28-207ENST00000490475 PRMT7Q9NVM4 692 aaPredicted RBP11.47□□□□□ -0.57
TTC28-207ENST00000490475 NOL7Q9UMY1 257 aaKnown RBP11.47□□□□□ -0.57
TTC28-207ENST00000490475 VPS37CA5D8V6 355 aaPredicted RBP11.46□□□□□ -0.57
TTC28-207ENST00000490475 ARL5CA6NH57 179 aa11.46□□□□□ -0.57
TTC28-207ENST00000490475 MEIS3P2A8K0S8 358 aa11.46□□□□□ -0.57
TTC28-207ENST00000490475 ZBTB39O15060 712 aa11.46□□□□□ -0.57
TTC28-207ENST00000490475 DDHD2O94830 711 aa11.46□□□□□ -0.57
TTC28-207ENST00000490475 POMCP01189 267 aa11.46□□□□□ -0.57
TTC28-207ENST00000490475 OR1G1P47890 313 aa11.46□□□□□ -0.57
TTC28-207ENST00000490475 TRAPPC10P48553 1259 aa11.46□□□□□ -0.57
TTC28-207ENST00000490475 GLUD2P49448 558 aa11.46□□□□□ -0.57
TTC28-207ENST00000490475 MRE11P49959 708 aa11.46□□□□□ -0.57
TTC28-207ENST00000490475 CLCN4P51793 760 aa11.46□□□□□ -0.57
TTC28-207ENST00000490475 MBTD1Q05BQ5 628 aa11.46□□□□□ -0.57
TTC28-207ENST00000490475 DSC1Q08554 894 aa11.46□□□□□ -0.57
TTC28-207ENST00000490475 GRIK3Q13003 919 aa11.46□□□□□ -0.57
TTC28-207ENST00000490475 CAPSQ13938 189 aa11.46□□□□□ -0.57
TTC28-207ENST00000490475 PPP4R3CPQ6ZMV5 832 aa11.46□□□□□ -0.57
TTC28-207ENST00000490475 GPR149Q86SP6 731 aa11.46□□□□□ -0.57
TTC28-207ENST00000490475 ALYREFQ86V81 257 aaKnown RBP11.46□□□□□ -0.57
TTC28-207ENST00000490475 TMEM173Q86WV6 379 aaPredicted RBP11.46□□□□□ -0.57
TTC28-207ENST00000490475 COLGALT2Q8IYK4 626 aa11.46□□□□□ -0.57
TTC28-207ENST00000490475 KREMEN2Q8NCW0 462 aa11.46□□□□□ -0.57
TTC28-207ENST00000490475 SMG8Q8ND04 991 aaKnown RBP11.46□□□□□ -0.57
TTC28-207ENST00000490475 KLHL5Q96PQ7 755 aa11.46□□□□□ -0.57
TTC28-207ENST00000490475 RPS6KC1Q96S38 1066 aa11.46□□□□□ -0.57
TTC28-207ENST00000490475 ADPGKQ9BRR6 497 aa11.46□□□□□ -0.57
TTC28-207ENST00000490475 POLR3CQ9BUI4 534 aaPredicted RBP11.46□□□□□ -0.57
TTC28-207ENST00000490475 RAB34Q9BZG1 259 aa11.46□□□□□ -0.57
TTC28-207ENST00000490475 PLEKHA4Q9H4M7 779 aa11.46□□□□□ -0.57
TTC28-207ENST00000490475 BMP2KQ9NSY1 1161 aaPredicted RBP11.46□□□□□ -0.57
TTC28-207ENST00000490475 PHLPP2Q6ZVD8 1323 aa11.45□□□□□ -0.58
TTC28-207ENST00000490475 A0A087WWV3 80 aa11.45□□□□□ -0.58
TTC28-207ENST00000490475 A0A1B0GUA9 196 aa11.45□□□□□ -0.58
TTC28-207ENST00000490475 LRRIQ4A6NIV6 560 aa11.45□□□□□ -0.58
TTC28-207ENST00000490475 C2CD4DB7Z1M9 353 aa11.45□□□□□ -0.58
TTC28-207ENST00000490475 N4BP3O15049 544 aa11.45□□□□□ -0.58
TTC28-207ENST00000490475 LILRB3O75022 631 aa11.45□□□□□ -0.58
TTC28-207ENST00000490475 GLUD1P00367 558 aa11.45□□□□□ -0.58
TTC28-207ENST00000490475 CNPP09543 421 aaKnown RBP11.45□□□□□ -0.58
TTC28-207ENST00000490475 EPCAMP16422 314 aa11.45□□□□□ -0.58
TTC28-207ENST00000490475 ARF4P18085 180 aaPredicted RBP11.45□□□□□ -0.58
TTC28-207ENST00000490475 PDCP20941 246 aa11.45□□□□□ -0.58
TTC28-207ENST00000490475 GLRA2P23416 452 aa11.45□□□□□ -0.58
TTC28-207ENST00000490475 RPA1P27694 616 aa11.45□□□□□ -0.58
TTC28-207ENST00000490475 AVPR2P30518 371 aa11.45□□□□□ -0.58
TTC28-207ENST00000490475 MLH1P40692 756 aa11.45□□□□□ -0.58
TTC28-207ENST00000490475 PTGDRQ13258 359 aa11.45□□□□□ -0.58
TTC28-207ENST00000490475 FAM187BQ17R55 369 aa11.45□□□□□ -0.58
TTC28-207ENST00000490475 USP41Q3LFD5 358 aa11.45□□□□□ -0.58
TTC28-207ENST00000490475 PDXDC1Q6P996 788 aa11.45□□□□□ -0.58
TTC28-207ENST00000490475 AUTS2Q8WXX7 1259 aa11.45□□□□□ -0.58
TTC28-207ENST00000490475 NXPE3Q969Y0 559 aa11.45□□□□□ -0.58
TTC28-207ENST00000490475 GAD1Q99259 594 aa11.45□□□□□ -0.58
TTC28-207ENST00000490475 POLR3FQ9H1D9 316 aaPredicted RBP11.45□□□□□ -0.58
TTC28-207ENST00000490475 IGSF9Q9P2J2 1179 aa11.45□□□□□ -0.58
TTC28-207ENST00000490475 MTCL1Q9Y4B5 1905 aaKnown RBP11.45□□□□□ -0.58
TTC28-207ENST00000490475 ARHGEF35A5YM69 484 aa11.44□□□□□ -0.58
TTC28-207ENST00000490475 POTEMA6NI47 508 aa11.44□□□□□ -0.58
TTC28-207ENST00000490475 USO1O60763 962 aaKnown RBP11.44□□□□□ -0.58
TTC28-207ENST00000490475 OR52Z1P0C646 297 aa11.44□□□□□ -0.58
TTC28-207ENST00000490475 EFNA5P52803 228 aa11.44□□□□□ -0.58
TTC28-207ENST00000490475 DSG1Q02413 1049 aa11.44□□□□□ -0.58
TTC28-207ENST00000490475 ELAVL2Q12926 359 aaKnown RBP11.44□□□□□ -0.58
TTC28-207ENST00000490475 IL17AQ16552 155 aa11.44□□□□□ -0.58
TTC28-207ENST00000490475 MAPK6Q16659 721 aa11.44□□□□□ -0.58
TTC28-207ENST00000490475 AMHR2Q16671 573 aa11.44□□□□□ -0.58
TTC28-207ENST00000490475 TMEM132AQ24JP5 1023 aa11.44□□□□□ -0.58
TTC28-207ENST00000490475 RILPL1Q5EBL4 403 aa11.44□□□□□ -0.58
TTC28-207ENST00000490475 CDCA2Q69YH5 1023 aaPredicted RBP11.44□□□□□ -0.58
TTC28-207ENST00000490475 TMC5Q6UXY8 1006 aa11.44□□□□□ -0.58
TTC28-207ENST00000490475 RNF168Q8IYW5 571 aaPredicted RBP11.44□□□□□ -0.58
TTC28-207ENST00000490475 ASAP3Q8TDY4 903 aa11.44□□□□□ -0.58
TTC28-207ENST00000490475 PIGOQ8TEQ8 1089 aa11.44□□□□□ -0.58
TTC28-207ENST00000490475 BCL7CQ8WUZ0 217 aaPredicted RBP11.44□□□□□ -0.58
TTC28-207ENST00000490475 CPB2Q96IY4 423 aa11.44□□□□□ -0.58
TTC28-207ENST00000490475 IFT74Q96LB3 600 aa11.44□□□□□ -0.58
TTC28-207ENST00000490475 EIF2AQ9BY44 585 aaKnown RBP11.44□□□□□ -0.58
TTC28-207ENST00000490475 RXFP1Q9HBX9 757 aa11.44□□□□□ -0.58
TTC28-207ENST00000490475 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.44□□□□□ -0.58
TTC28-207ENST00000490475 FNIP2Q9P278 1114 aa11.44□□□□□ -0.58
TTC28-207ENST00000490475 ADAM28Q9UKQ2 775 aa11.44□□□□□ -0.58
TTC28-207ENST00000490475 PRG3Q9Y2Y8 225 aaPredicted RBP11.44□□□□□ -0.58
TTC28-207ENST00000490475 DENND4AQ7Z401 1863 aa11.44□□□□□ -0.58
TTC28-207ENST00000490475 SF3B1O75533 1304 aaKnown RBP eCLIP11.43□□□□□ -0.581e-8■■■■■ 48.2
TTC28-207ENST00000490475 KMT2EQ8IZD2 1858 aa11.43□□□□□ -0.58
TTC28-207ENST00000490475 STX6O43752 255 aa11.43□□□□□ -0.58
TTC28-207ENST00000490475 SSBP05455 408 aaKnown RBP eCLIP11.43□□□□□ -0.58
TTC28-207ENST00000490475 HSP90AA1P07900 732 aaKnown RBP11.43□□□□□ -0.58
TTC28-207ENST00000490475 SP100P23497 879 aaPredicted RBP11.43□□□□□ -0.58
TTC28-207ENST00000490475 NAMPTP43490 491 aa11.43□□□□□ -0.58
TTC28-207ENST00000490475 SCNN1GP51170 649 aa11.43□□□□□ -0.58
TTC28-207ENST00000490475 KIAA0319Q5VV43 1072 aa11.43□□□□□ -0.58
TTC28-207ENST00000490475 FAM173BQ6P4H8 233 aa11.43□□□□□ -0.58
TTC28-207ENST00000490475 CATSPER3Q86XQ3 398 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms