RNA–Protein interactions for RNA: ENST00000490283.1

SEC13-218, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 740 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-218ENST00000490283 HOXB8P17481 243 aaPredicted RBP19.22■□□□□ 0.67
SEC13-218ENST00000490283 GRIK3Q13003 919 aa19.22■□□□□ 0.67
SEC13-218ENST00000490283 TPRNQ4KMQ1 711 aa19.22■□□□□ 0.67
SEC13-218ENST00000490283 RINT1Q6NUQ1 792 aa19.22■□□□□ 0.67
SEC13-218ENST00000490283 COLGALT2Q8IYK4 626 aa19.22■□□□□ 0.67
SEC13-218ENST00000490283 VN1R2Q8NFZ6 395 aa19.22■□□□□ 0.67
SEC13-218ENST00000490283 BCL7CQ8WUZ0 217 aaPredicted RBP19.22■□□□□ 0.67
SEC13-218ENST00000490283 PLIN2Q99541 437 aa19.22■□□□□ 0.67
SEC13-218ENST00000490283 RUSC1Q9BVN2 902 aa19.22■□□□□ 0.67
SEC13-218ENST00000490283 COLEC11Q9BWP8 271 aa19.22■□□□□ 0.67
SEC13-218ENST00000490283 EMILIN2Q9BXX0 1053 aa19.22■□□□□ 0.67
SEC13-218ENST00000490283 KMT5AQ9NQR1 393 aa19.22■□□□□ 0.67
SEC13-218ENST00000490283 KCND2Q9NZV8 630 aa19.22■□□□□ 0.67
SEC13-218ENST00000490283 SSX2IPQ9Y2D8 614 aa19.22■□□□□ 0.67
SEC13-218ENST00000490283 RBM19Q9Y4C8 960 aaKnown RBP19.22■□□□□ 0.67
SEC13-218ENST00000490283 USP15Q9Y4E8 981 aaPredicted RBP19.22■□□□□ 0.67
SEC13-218ENST00000490283 IRAK3Q9Y616 596 aa19.22■□□□□ 0.67
SEC13-218ENST00000490283 B4GALT3O60512 393 aa19.21■□□□□ 0.67
SEC13-218ENST00000490283 URODP06132 367 aa19.21■□□□□ 0.67
SEC13-218ENST00000490283 GUCY2CP25092 1073 aa19.21■□□□□ 0.67
SEC13-218ENST00000490283 LONP1P36776 959 aaKnown RBP19.21■□□□□ 0.67
SEC13-218ENST00000490283 NPTX2P47972 431 aa19.21■□□□□ 0.67
SEC13-218ENST00000490283 SMTNP53814 917 aa19.21■□□□□ 0.67
SEC13-218ENST00000490283 DSC1Q08554 894 aa19.21■□□□□ 0.67
SEC13-218ENST00000490283 SF3A1Q15459 793 aaKnown RBP19.21■□□□□ 0.67
SEC13-218ENST00000490283 ATF7IP2Q5U623 682 aa19.21■□□□□ 0.67
SEC13-218ENST00000490283 ANKRD54Q6NXT1 300 aa19.21■□□□□ 0.67
SEC13-218ENST00000490283 C1orf186Q6ZWK4 172 aa19.21■□□□□ 0.67
SEC13-218ENST00000490283 KCNK18Q7Z418 384 aa19.21■□□□□ 0.67
SEC13-218ENST00000490283 PPFIBP1Q86W92 1011 aa19.21■□□□□ 0.67
SEC13-218ENST00000490283 MRPL17Q9NRX2 175 aaKnown RBP19.21■□□□□ 0.67
SEC13-218ENST00000490283 KLK14Q9P0G3 267 aa19.21■□□□□ 0.67
SEC13-218ENST00000490283 SPDYE4A6NLX3 237 aa19.2■□□□□ 0.66
SEC13-218ENST00000490283 CLASP2O75122 1294 aaKnown RBP19.2■□□□□ 0.66
SEC13-218ENST00000490283 PLA2G4BP0C869 781 aa19.2■□□□□ 0.66
SEC13-218ENST00000490283 RBM10P98175 930 aaKnown RBP19.2■□□□□ 0.66
SEC13-218ENST00000490283 SYT2Q8N9I0 419 aaPredicted RBP19.2■□□□□ 0.66
SEC13-218ENST00000490283 AUTS2Q8WXX7 1259 aa19.2■□□□□ 0.66
SEC13-218ENST00000490283 PNMA5Q96PV4 448 aa19.2■□□□□ 0.66
SEC13-218ENST00000490283 TMEM134Q9H6X4 195 aa19.2■□□□□ 0.66
SEC13-218ENST00000490283 CD320Q9NPF0 282 aa19.2■□□□□ 0.66
SEC13-218ENST00000490283 DZANK1Q9NVP4 752 aa19.2■□□□□ 0.66
SEC13-218ENST00000490283 MIOSQ9NXC5 875 aa19.2■□□□□ 0.66
SEC13-218ENST00000490283 SNTG2Q9NY99 539 aa19.2■□□□□ 0.66
SEC13-218ENST00000490283 HCFC2Q9Y5Z7 792 aa19.2■□□□□ 0.66
SEC13-218ENST00000490283 SOD2P04179 222 aa19.19■□□□□ 0.66
SEC13-218ENST00000490283 ALADP13716 330 aa19.19■□□□□ 0.66
SEC13-218ENST00000490283 SYT1P21579 422 aa19.19■□□□□ 0.66
SEC13-218ENST00000490283 RAD51AP2Q09MP3 1159 aa19.19■□□□□ 0.66
SEC13-218ENST00000490283 STRN3Q13033 797 aa19.19■□□□□ 0.66
SEC13-218ENST00000490283 KCNC3Q14003 757 aa19.19■□□□□ 0.66
SEC13-218ENST00000490283 PTPN14Q15678 1187 aa19.19■□□□□ 0.66
SEC13-218ENST00000490283 TMEM119Q4V9L6 283 aa19.19■□□□□ 0.66
SEC13-218ENST00000490283 KIAA1841Q6NSI8 718 aa19.19■□□□□ 0.66
SEC13-218ENST00000490283 CES5AQ6NT32 575 aa19.19■□□□□ 0.66
SEC13-218ENST00000490283 DAW1Q8N136 415 aa19.19■□□□□ 0.66
SEC13-218ENST00000490283 HERC2P3Q9BVR0 1158 aa19.19■□□□□ 0.66
SEC13-218ENST00000490283 MRPL4Q9BYD3 311 aaKnown RBP19.19■□□□□ 0.66
SEC13-218ENST00000490283 TNFSF13BQ9Y275 285 aa19.19■□□□□ 0.66
SEC13-218ENST00000490283 C19orf67A6NJJ6 358 aa19.18■□□□□ 0.66
SEC13-218ENST00000490283 TTLL13PA6NNM8 815 aa19.18■□□□□ 0.66
SEC13-218ENST00000490283 H0YCG3 227 aa19.18■□□□□ 0.66
SEC13-218ENST00000490283 RECQL4O94761 1208 aa19.18■□□□□ 0.66
SEC13-218ENST00000490283 THP07101 528 aa19.18■□□□□ 0.66
SEC13-218ENST00000490283 KLRC2P26717 231 aa19.18■□□□□ 0.66
SEC13-218ENST00000490283 EEF1DP3Q658K8 133 aa19.18■□□□□ 0.66
SEC13-218ENST00000490283 PHF7Q9BWX1 381 aaPredicted RBP19.18■□□□□ 0.66
SEC13-218ENST00000490283 VN1R3Q9BXE9 311 aa19.18■□□□□ 0.66
SEC13-218ENST00000490283 FOXD4L1Q9NU39 408 aa19.18■□□□□ 0.66
SEC13-218ENST00000490283 MARCH5Q9NX47 278 aa19.18■□□□□ 0.66
SEC13-218ENST00000490283 LARSQ9P2J5 1176 aaKnown RBP19.18■□□□□ 0.66
SEC13-218ENST00000490283 ARHGAP28Q9P2N2 729 aa19.18■□□□□ 0.66
SEC13-218ENST00000490283 USP20Q9Y2K6 914 aa19.18■□□□□ 0.66
SEC13-218ENST00000490283 GDAQ9Y2T3 454 aa19.18■□□□□ 0.66
SEC13-218ENST00000490283 BDP1A6H8Y1 2624 aa19.17■□□□□ 0.66
SEC13-218ENST00000490283 PI4K2BG5E9Z4 385 aa19.17■□□□□ 0.66
SEC13-218ENST00000490283 C2CD2LO14523 706 aa19.17■□□□□ 0.66
SEC13-218ENST00000490283 TADA2AO75478 443 aa19.17■□□□□ 0.66
SEC13-218ENST00000490283 HSP90AA1P07900 732 aaKnown RBP19.17■□□□□ 0.66
SEC13-218ENST00000490283 PLS3P13797 630 aa19.17■□□□□ 0.66
SEC13-218ENST00000490283 GLUD2P49448 558 aa19.17■□□□□ 0.66
SEC13-218ENST00000490283 YARSP54577 528 aaKnown RBP19.17■□□□□ 0.66
SEC13-218ENST00000490283 SLC12A3P55017 1021 aa19.17■□□□□ 0.66
SEC13-218ENST00000490283 ITIH3Q06033 890 aa19.17■□□□□ 0.66
SEC13-218ENST00000490283 TUSC3Q13454 348 aa19.17■□□□□ 0.66
SEC13-218ENST00000490283 CBX2Q14781 532 aaPredicted RBP19.17■□□□□ 0.66
SEC13-218ENST00000490283 ZNF568Q3ZCX4 644 aa19.17■□□□□ 0.66
SEC13-218ENST00000490283 NT5DC1Q5TFE4 455 aa19.17■□□□□ 0.66
SEC13-218ENST00000490283 ELMSAN1Q6PJG2 1045 aa19.17■□□□□ 0.66
SEC13-218ENST00000490283 HSCBQ8IWL3 235 aa19.17■□□□□ 0.66
SEC13-218ENST00000490283 SPIRE2Q8WWL2 714 aa19.17■□□□□ 0.66
SEC13-218ENST00000490283 TCHPQ9BT92 498 aa19.17■□□□□ 0.66
SEC13-218ENST00000490283 CCDC94Q9BW85 323 aaPredicted RBP19.17■□□□□ 0.66
SEC13-218ENST00000490283 APOL5Q9BWW9 433 aa19.17■□□□□ 0.66
SEC13-218ENST00000490283 EPHX3Q9H6B9 360 aa19.17■□□□□ 0.66
SEC13-218ENST00000490283 TOPORSQ9NS56 1045 aaPredicted RBP19.17■□□□□ 0.66
SEC13-218ENST00000490283 SFI1A8K8P3 1242 aa19.16■□□□□ 0.66
SEC13-218ENST00000490283 SLC16A4O15374 487 aa19.16■□□□□ 0.66
SEC13-218ENST00000490283 DCXO43602 365 aa19.16■□□□□ 0.66
SEC13-218ENST00000490283 EDN1P05305 212 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms