RNA–Protein interactions for RNA: ENST00000490062.1

ERCC3-207, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 4

Gene ERCC3, Length 576 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-207ENST00000490062 PBX2P40425 430 aa19.1■□□□□ 0.65
ERCC3-207ENST00000490062 GRM5P41594 1212 aa19.1■□□□□ 0.65
ERCC3-207ENST00000490062 LIG4P49917 911 aa19.1■□□□□ 0.65
ERCC3-207ENST00000490062 RABGGTBP53611 331 aa19.1■□□□□ 0.65
ERCC3-207ENST00000490062 KCNA1Q09470 495 aa19.1■□□□□ 0.65
ERCC3-207ENST00000490062 STK4Q13043 487 aa19.1■□□□□ 0.65
ERCC3-207ENST00000490062 PNOCQ13519 176 aa19.1■□□□□ 0.65
ERCC3-207ENST00000490062 NOLC1Q14978 699 aaKnown RBP eCLIP19.1■□□□□ 0.65
ERCC3-207ENST00000490062 KYAT1Q16773 422 aa19.1■□□□□ 0.65
ERCC3-207ENST00000490062 ZNF568Q3ZCX4 644 aa19.1■□□□□ 0.65
ERCC3-207ENST00000490062 CLLU1OSQ5K130 101 aa19.1■□□□□ 0.65
ERCC3-207ENST00000490062 SLFN12LQ6IEE8 588 aa19.1■□□□□ 0.65
ERCC3-207ENST00000490062 CDR2LQ86X02 465 aaPredicted RBP19.1■□□□□ 0.65
ERCC3-207ENST00000490062 KIAA0895Q8NCT3 520 aa19.1■□□□□ 0.65
ERCC3-207ENST00000490062 GLIS3Q8NEA6 775 aa19.1■□□□□ 0.65
ERCC3-207ENST00000490062 SCFD1Q8WVM8 642 aa19.1■□□□□ 0.65
ERCC3-207ENST00000490062 CLP1Q92989 425 aaKnown RBP19.1■□□□□ 0.65
ERCC3-207ENST00000490062 HPS3Q969F9 1004 aa19.1■□□□□ 0.65
ERCC3-207ENST00000490062 CASD1Q96PB1 797 aa19.1■□□□□ 0.65
ERCC3-207ENST00000490062 NXF3Q9H4D5 531 aaKnown RBP19.1■□□□□ 0.65
ERCC3-207ENST00000490062 RMND1Q9NWS8 449 aa19.1■□□□□ 0.65
ERCC3-207ENST00000490062 PCDHA5Q9Y5H7 936 aa19.1■□□□□ 0.65
ERCC3-207ENST00000490062 FAM189A1O60320 539 aa19.09■□□□□ 0.65
ERCC3-207ENST00000490062 OFD1O75665 1012 aa19.09■□□□□ 0.65
ERCC3-207ENST00000490062 SMC2O95347 1197 aa19.09■□□□□ 0.65
ERCC3-207ENST00000490062 ITGA4P13612 1032 aa19.09■□□□□ 0.65
ERCC3-207ENST00000490062 HOXD13P35453 343 aa19.09■□□□□ 0.65
ERCC3-207ENST00000490062 TMEM132AQ24JP5 1023 aa19.09■□□□□ 0.65
ERCC3-207ENST00000490062 MRPL9Q9BYD2 267 aaKnown RBP19.09■□□□□ 0.65
ERCC3-207ENST00000490062 HAPLN2Q9GZV7 340 aa19.09■□□□□ 0.65
ERCC3-207ENST00000490062 RSAD1Q9HA92 442 aa19.09■□□□□ 0.65
ERCC3-207ENST00000490062 CGNQ9P2M7 1197 aaKnown RBP19.09■□□□□ 0.65
ERCC3-207ENST00000490062 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.08■□□□□ 0.64
ERCC3-207ENST00000490062 MEIS3P2A8K0S8 358 aa19.08■□□□□ 0.64
ERCC3-207ENST00000490062 KIAA0391O15091 583 aaKnown RBP19.08■□□□□ 0.64
ERCC3-207ENST00000490062 PRPF6O94906 941 aaKnown RBP19.08■□□□□ 0.64
ERCC3-207ENST00000490062 FGFR1P11362 822 aa19.08■□□□□ 0.64
ERCC3-207ENST00000490062 GARTP22102 1010 aa19.08■□□□□ 0.64
ERCC3-207ENST00000490062 XKR4Q5GH76 650 aa19.08■□□□□ 0.64
ERCC3-207ENST00000490062 FAM117BQ6P1L5 589 aa19.08■□□□□ 0.64
ERCC3-207ENST00000490062 GLB1LQ6UWU2 654 aa19.08■□□□□ 0.64
ERCC3-207ENST00000490062 TIFAQ96CG3 184 aa19.08■□□□□ 0.64
ERCC3-207ENST00000490062 BICD1Q96G01 975 aa19.08■□□□□ 0.64
ERCC3-207ENST00000490062 ZBTB45Q96K62 511 aaPredicted RBP19.08■□□□□ 0.64
ERCC3-207ENST00000490062 SAMD11Q96NU1 681 aa19.08■□□□□ 0.64
ERCC3-207ENST00000490062 RNF39Q9H2S5 420 aa19.08■□□□□ 0.64
ERCC3-207ENST00000490062 SLC39A2Q9NP94 309 aa19.08■□□□□ 0.64
ERCC3-207ENST00000490062 KANSL3Q9P2N6 904 aa19.08■□□□□ 0.64
ERCC3-207ENST00000490062 LCHNA4D1U4 455 aa19.07■□□□□ 0.64
ERCC3-207ENST00000490062 LINC01553A4QN01 128 aa19.07■□□□□ 0.64
ERCC3-207ENST00000490062 CARNS1A5YM72 827 aa19.07■□□□□ 0.64
ERCC3-207ENST00000490062 ANKRD63C9JTQ0 380 aa19.07■□□□□ 0.64
ERCC3-207ENST00000490062 OGTO15294 1046 aa19.07■□□□□ 0.64
ERCC3-207ENST00000490062 KIF20AO95235 890 aa19.07■□□□□ 0.64
ERCC3-207ENST00000490062 CA3P07451 260 aa19.07■□□□□ 0.64
ERCC3-207ENST00000490062 ADRB2P07550 413 aa19.07■□□□□ 0.64
ERCC3-207ENST00000490062 MYOGP15173 224 aa19.07■□□□□ 0.64
ERCC3-207ENST00000490062 ADSSP30520 456 aa19.07■□□□□ 0.64
ERCC3-207ENST00000490062 MCM4P33991 863 aa19.07■□□□□ 0.64
ERCC3-207ENST00000490062 FXR1P51114 621 aaKnown RBP eCLIP19.07■□□□□ 0.64
ERCC3-207ENST00000490062 TAP1Q03518 808 aa19.07■□□□□ 0.64
ERCC3-207ENST00000490062 C12orf56Q8IXR9 622 aa19.07■□□□□ 0.64
ERCC3-207ENST00000490062 ABI1Q8IZP0 508 aa19.07■□□□□ 0.64
ERCC3-207ENST00000490062 LRRC43Q8N309 656 aa19.07■□□□□ 0.64
ERCC3-207ENST00000490062 GUF1Q8N442 669 aaKnown RBP19.07■□□□□ 0.64
ERCC3-207ENST00000490062 GSTCDQ8NEC7 633 aa19.07■□□□□ 0.64
ERCC3-207ENST00000490062 LPPQ93052 612 aa19.07■□□□□ 0.64
ERCC3-207ENST00000490062 SMARCE1Q969G3 411 aa19.07■□□□□ 0.64
ERCC3-207ENST00000490062 TCHPQ9BT92 498 aa19.07■□□□□ 0.64
ERCC3-207ENST00000490062 GBP3Q9H0R5 595 aa19.07■□□□□ 0.64
ERCC3-207ENST00000490062 CLSTN2Q9H4D0 955 aa19.07■□□□□ 0.64
ERCC3-207ENST00000490062 RWDD3Q9Y3V2 267 aa19.07■□□□□ 0.64
ERCC3-207ENST00000490062 HES2Q9Y543 173 aa19.07■□□□□ 0.64
ERCC3-207ENST00000490062 RALGAPA2Q2PPJ7 1873 aa19.07■□□□□ 0.64
ERCC3-207ENST00000490062 TGFB1I1O43294 461 aa19.06■□□□□ 0.64
ERCC3-207ENST00000490062 MBD3O95983 291 aa19.06■□□□□ 0.64
ERCC3-207ENST00000490062 ERVK-21P61565 698 aa19.06■□□□□ 0.64
ERCC3-207ENST00000490062 BTG3Q14201 252 aaPredicted RBP19.06■□□□□ 0.64
ERCC3-207ENST00000490062 KNOP1Q1ED39 458 aaKnown RBP19.06■□□□□ 0.64
ERCC3-207ENST00000490062 NOMO2Q5JPE7 1267 aa19.06■□□□□ 0.64
ERCC3-207ENST00000490062 ALKAL1Q6UXT8 129 aa19.06■□□□□ 0.64
ERCC3-207ENST00000490062 FIBCD1Q8N539 461 aa19.06■□□□□ 0.64
ERCC3-207ENST00000490062 HELQQ8TDG4 1101 aa19.06■□□□□ 0.64
ERCC3-207ENST00000490062 CCDC94Q9BW85 323 aaPredicted RBP19.06■□□□□ 0.64
ERCC3-207ENST00000490062 NKX2-4Q9H2Z4 354 aa19.06■□□□□ 0.64
ERCC3-207ENST00000490062 SLC28A3Q9HAS3 691 aa19.06■□□□□ 0.64
ERCC3-207ENST00000490062 PLEKHA5Q9HAU0 1116 aa19.06■□□□□ 0.64
ERCC3-207ENST00000490062 SNTG2Q9NY99 539 aa19.06■□□□□ 0.64
ERCC3-207ENST00000490062 ANKFY1Q9P2R3 1169 aa19.06■□□□□ 0.64
ERCC3-207ENST00000490062 ARL5CA6NH57 179 aa19.05■□□□□ 0.64
ERCC3-207ENST00000490062 TBKBP1A7MCY6 615 aa19.05■□□□□ 0.64
ERCC3-207ENST00000490062 C5orf67F2Z3F1 127 aa19.05■□□□□ 0.64
ERCC3-207ENST00000490062 RECQL4O94761 1208 aa19.05■□□□□ 0.64
ERCC3-207ENST00000490062 ARHGEF15O94989 841 aa19.05■□□□□ 0.64
ERCC3-207ENST00000490062 CLTAP09496 248 aa19.05■□□□□ 0.64
ERCC3-207ENST00000490062 GATMP50440 423 aa19.05■□□□□ 0.64
ERCC3-207ENST00000490062 ZNF658Q5TYW1 1059 aaPredicted RBP19.05■□□□□ 0.64
ERCC3-207ENST00000490062 LRRC55Q6ZSA7 311 aa19.05■□□□□ 0.64
ERCC3-207ENST00000490062 SYCP3Q8IZU3 236 aa19.05■□□□□ 0.64
ERCC3-207ENST00000490062 CEP120Q8N960 986 aa19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms