RNA–Protein interactions for RNA: ENST00000489758.1

CLIC4-203, Transcript of chloride intracellular channel 4, humanhuman

TSL 2

Gene CLIC4, Length 439 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-203ENST00000489758 MRPL10Q7Z7H8 261 aaKnown RBP17.6■□□□□ 0.41
CLIC4-203ENST00000489758 ZNF598Q86UK7 904 aaKnown RBP17.6■□□□□ 0.41
CLIC4-203ENST00000489758 ECHDC2Q86YB7 292 aa17.6■□□□□ 0.41
CLIC4-203ENST00000489758 C12orf56Q8IXR9 622 aa17.6■□□□□ 0.41
CLIC4-203ENST00000489758 TMEM174Q8WUU8 243 aa17.6■□□□□ 0.41
CLIC4-203ENST00000489758 MED15Q96RN5 788 aa17.6■□□□□ 0.41
CLIC4-203ENST00000489758 ADPGKQ9BRR6 497 aa17.6■□□□□ 0.41
CLIC4-203ENST00000489758 TCHPQ9BT92 498 aa17.6■□□□□ 0.41
CLIC4-203ENST00000489758 CXXC1Q9P0U4 656 aaPredicted RBP17.6■□□□□ 0.41
CLIC4-203ENST00000489758 IPPQ9Y573 584 aa17.6■□□□□ 0.41
CLIC4-203ENST00000489758 PSMA7O14818 248 aa17.59■□□□□ 0.41
CLIC4-203ENST00000489758 GARTP22102 1010 aa17.59■□□□□ 0.41
CLIC4-203ENST00000489758 RAB27AP51159 221 aa17.59■□□□□ 0.41
CLIC4-203ENST00000489758 DEFB103AP81534 67 aa17.59■□□□□ 0.41
CLIC4-203ENST00000489758 TYRO3Q06418 890 aa17.59■□□□□ 0.41
CLIC4-203ENST00000489758 STIM1Q13586 685 aa17.59■□□□□ 0.41
CLIC4-203ENST00000489758 ZBTB41Q5SVQ8 909 aa17.59■□□□□ 0.41
CLIC4-203ENST00000489758 HS2ST1Q7LGA3 356 aa17.59■□□□□ 0.41
CLIC4-203ENST00000489758 CEP120Q8N960 986 aa17.59■□□□□ 0.41
CLIC4-203ENST00000489758 GOLGA5Q8TBA6 731 aa17.59■□□□□ 0.41
CLIC4-203ENST00000489758 P2RX5Q93086 422 aa17.59■□□□□ 0.41
CLIC4-203ENST00000489758 NXF3Q9H4D5 531 aaKnown RBP17.59■□□□□ 0.41
CLIC4-203ENST00000489758 DMAC2Q9NW81 257 aa17.59■□□□□ 0.41
CLIC4-203ENST00000489758 CGNQ9P2M7 1197 aaKnown RBP17.59■□□□□ 0.41
CLIC4-203ENST00000489758 HES2Q9Y543 173 aa17.59■□□□□ 0.41
CLIC4-203ENST00000489758 TRIM49BA6NDI0 452 aa17.58■□□□□ 0.4
CLIC4-203ENST00000489758 CLIC2O15247 247 aa17.58■□□□□ 0.4
CLIC4-203ENST00000489758 CCNE1P24864 410 aa17.58■□□□□ 0.4
CLIC4-203ENST00000489758 SHHQ15465 462 aa17.58■□□□□ 0.4
CLIC4-203ENST00000489758 STX1AQ16623 288 aa17.58■□□□□ 0.4
CLIC4-203ENST00000489758 NFIL3Q16649 462 aa17.58■□□□□ 0.4
CLIC4-203ENST00000489758 ANKRD40Q6AI12 368 aa17.58■□□□□ 0.4
CLIC4-203ENST00000489758 KLHL10Q6JEL2 608 aa17.58■□□□□ 0.4
CLIC4-203ENST00000489758 TTI2Q6NXR4 508 aa17.58■□□□□ 0.4
CLIC4-203ENST00000489758 ARMCX5Q6P1M9 558 aa17.58■□□□□ 0.4
CLIC4-203ENST00000489758 SLC9A9Q8IVB4 645 aa17.58■□□□□ 0.4
CLIC4-203ENST00000489758 TMEM192Q8IY95 271 aa17.58■□□□□ 0.4
CLIC4-203ENST00000489758 ZSWIM2Q8NEG5 633 aa17.58■□□□□ 0.4
CLIC4-203ENST00000489758 NELFBQ8WX92 580 aa17.58■□□□□ 0.4
CLIC4-203ENST00000489758 POMGNT1Q8WZA1 660 aa17.58■□□□□ 0.4
CLIC4-203ENST00000489758 MSTO1Q9BUK6 570 aa17.58■□□□□ 0.4
CLIC4-203ENST00000489758 RNF39Q9H2S5 420 aa17.58■□□□□ 0.4
CLIC4-203ENST00000489758 ELAC1Q9H777 363 aaKnown RBP17.58■□□□□ 0.4
CLIC4-203ENST00000489758 ANO10Q9NW15 660 aa17.58■□□□□ 0.4
CLIC4-203ENST00000489758 CTNND2Q9UQB3 1225 aa17.58■□□□□ 0.4
CLIC4-203ENST00000489758 MEIS3P2A8K0S8 358 aa17.57■□□□□ 0.4
CLIC4-203ENST00000489758 OGTO15294 1046 aa17.57■□□□□ 0.4
CLIC4-203ENST00000489758 MEFVO15553 781 aaPredicted RBP17.57■□□□□ 0.4
CLIC4-203ENST00000489758 AMHP03971 560 aa17.57■□□□□ 0.4
CLIC4-203ENST00000489758 NR3C1P04150 777 aa17.57■□□□□ 0.4
CLIC4-203ENST00000489758 HARSP12081 509 aaKnown RBP17.57■□□□□ 0.4
CLIC4-203ENST00000489758 SKIP12755 728 aa17.57■□□□□ 0.4
CLIC4-203ENST00000489758 BMP8BP34820 402 aa17.57■□□□□ 0.4
CLIC4-203ENST00000489758 GRM5P41594 1212 aa17.57■□□□□ 0.4
CLIC4-203ENST00000489758 MATR3P43243 847 aaKnown RBP eCLIP17.57■□□□□ 0.4
CLIC4-203ENST00000489758 LRRC63Q05C16 580 aa17.57■□□□□ 0.4
CLIC4-203ENST00000489758 PAK1Q13153 545 aa17.57■□□□□ 0.4
CLIC4-203ENST00000489758 EDRF1Q3B7T1 1238 aa17.57■□□□□ 0.4
CLIC4-203ENST00000489758 SEZ6Q53EL9 994 aa17.57■□□□□ 0.4
CLIC4-203ENST00000489758 FOXR2Q6PJQ5 311 aa17.57■□□□□ 0.4
CLIC4-203ENST00000489758 CRELD2Q6UXH1 353 aaPredicted RBP17.57■□□□□ 0.4
CLIC4-203ENST00000489758 AGMOQ6ZNB7 445 aa17.57■□□□□ 0.4
CLIC4-203ENST00000489758 C11orf57Q6ZUT1 292 aaPredicted RBP17.57■□□□□ 0.4
CLIC4-203ENST00000489758 APBB1IPQ7Z5R6 666 aaPredicted RBP17.57■□□□□ 0.4
CLIC4-203ENST00000489758 ZC3H3Q8IXZ2 948 aaKnown RBP17.57■□□□□ 0.4
CLIC4-203ENST00000489758 DUSP9Q99956 384 aaKnown RBP17.57■□□□□ 0.4
CLIC4-203ENST00000489758 TRIM6Q9C030 488 aaPredicted RBP17.57■□□□□ 0.4
CLIC4-203ENST00000489758 UBE2OQ9C0C9 1292 aaKnown RBP17.57■□□□□ 0.4
CLIC4-203ENST00000489758 PRO3102Q9H379 93 aa17.57■□□□□ 0.4
CLIC4-203ENST00000489758 PCIF1Q9H4Z3 704 aa17.57■□□□□ 0.4
CLIC4-203ENST00000489758 RNF19AQ9NV58 838 aa17.57■□□□□ 0.4
CLIC4-203ENST00000489758 TMEM161AQ9NX61 479 aa17.57■□□□□ 0.4
CLIC4-203ENST00000489758 HSPBP1Q9NZL4 362 aa17.57■□□□□ 0.4
CLIC4-203ENST00000489758 RWDD2AQ9UIY3 292 aa17.57■□□□□ 0.4
CLIC4-203ENST00000489758 AGO2Q9UKV8 859 aaKnown RBP17.57■□□□□ 0.4
CLIC4-203ENST00000489758 CALUO43852 315 aaPredicted RBP17.56■□□□□ 0.4
CLIC4-203ENST00000489758 EOMESO95936 686 aa17.56■□□□□ 0.4
CLIC4-203ENST00000489758 STAG3L1P0CL83 205 aa17.56■□□□□ 0.4
CLIC4-203ENST00000489758 TNFSF9P41273 254 aa17.56■□□□□ 0.4
CLIC4-203ENST00000489758 MYBPC2Q14324 1141 aa17.56■□□□□ 0.4
CLIC4-203ENST00000489758 CT47A1Q5JQC4 288 aaPredicted RBP17.56■□□□□ 0.4
CLIC4-203ENST00000489758 NPAS4Q8IUM7 802 aa17.56■□□□□ 0.4
CLIC4-203ENST00000489758 THNSL1Q8IYQ7 743 aa17.56■□□□□ 0.4
CLIC4-203ENST00000489758 LPPQ93052 612 aa17.56■□□□□ 0.4
CLIC4-203ENST00000489758 TOP1MTQ969P6 601 aa17.56■□□□□ 0.4
CLIC4-203ENST00000489758 SAAL1Q96ER3 474 aa17.56■□□□□ 0.4
CLIC4-203ENST00000489758 FBXL18Q96ME1 805 aa17.56■□□□□ 0.4
CLIC4-203ENST00000489758 DACH1Q9UI36 760 aa17.56■□□□□ 0.4
CLIC4-203ENST00000489758 CPSF3Q9UKF6 684 aaKnown RBP17.56■□□□□ 0.4
CLIC4-203ENST00000489758 MYH11P35749 1972 aa17.56■□□□□ 0.4
CLIC4-203ENST00000489758 ZBBXA8MT70 800 aa17.55■□□□□ 0.4
CLIC4-203ENST00000489758 KIAA0391O15091 583 aaKnown RBP17.55■□□□□ 0.4
CLIC4-203ENST00000489758 EXTL3O43909 919 aa17.55■□□□□ 0.4
CLIC4-203ENST00000489758 CCDC192P0DO97 292 aa17.55■□□□□ 0.4
CLIC4-203ENST00000489758 AKAP5P24588 427 aa17.55■□□□□ 0.4
CLIC4-203ENST00000489758 ERCC5P28715 1186 aaPredicted RBP17.55■□□□□ 0.4
CLIC4-203ENST00000489758 KCNJ6P48051 423 aa17.55■□□□□ 0.4
CLIC4-203ENST00000489758 CYP2J2P51589 502 aa17.55■□□□□ 0.4
CLIC4-203ENST00000489758 STX17P56962 302 aa17.55■□□□□ 0.4
CLIC4-203ENST00000489758 OSTNP61366 133 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms