RNA–Protein interactions for RNA: ENST00000489581.1

TOP3B-217, Transcript of DNA topoisomerase III beta, humanhuman

TSL 2

Gene TOP3B, Length 789 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-217ENST00000489581 TPH2Q8IWU9 490 aa18.9■□□□□ 0.62
TOP3B-217ENST00000489581 OXER1Q8TDS5 423 aa18.9■□□□□ 0.62
TOP3B-217ENST00000489581 ZNF707Q96C28 371 aaPredicted RBP18.9■□□□□ 0.62
TOP3B-217ENST00000489581 COLEC11Q9BWP8 271 aa18.9■□□□□ 0.62
TOP3B-217ENST00000489581 RHOBTB2Q9BYZ6 727 aa18.9■□□□□ 0.62
TOP3B-217ENST00000489581 CSRNP2Q9H175 543 aa18.9■□□□□ 0.62
TOP3B-217ENST00000489581 ZSWIM4Q9H7M6 989 aa18.9■□□□□ 0.62
TOP3B-217ENST00000489581 PIDD1Q9HB75 910 aa18.9■□□□□ 0.62
TOP3B-217ENST00000489581 XPNPEP1Q9NQW7 623 aa18.9■□□□□ 0.62
TOP3B-217ENST00000489581 GJB4Q9NTQ9 266 aa18.9■□□□□ 0.62
TOP3B-217ENST00000489581 EPS15L1Q9UBC2 864 aa18.9■□□□□ 0.62
TOP3B-217ENST00000489581 TBX3O15119 743 aa18.89■□□□□ 0.61
TOP3B-217ENST00000489581 NR1I2O75469 434 aa18.89■□□□□ 0.61
TOP3B-217ENST00000489581 ID4P47928 161 aa18.89■□□□□ 0.61
TOP3B-217ENST00000489581 NCBP1Q09161 790 aaKnown RBP18.89■□□□□ 0.61
TOP3B-217ENST00000489581 MXD4Q14582 209 aaPredicted RBP18.89■□□□□ 0.61
TOP3B-217ENST00000489581 ST13P5Q8NFI4 369 aaPredicted RBP18.89■□□□□ 0.61
TOP3B-217ENST00000489581 GPR62Q9BZJ7 368 aa18.89■□□□□ 0.61
TOP3B-217ENST00000489581 NT5C3AQ9H0P0 336 aa18.89■□□□□ 0.61
TOP3B-217ENST00000489581 CHST7Q9NS84 486 aa18.89■□□□□ 0.61
TOP3B-217ENST00000489581 TGM5O43548 720 aa18.88■□□□□ 0.61
TOP3B-217ENST00000489581 ARF4P18085 180 aaPredicted RBP18.88■□□□□ 0.61
TOP3B-217ENST00000489581 RPL17P18621 184 aaKnown RBP18.88■□□□□ 0.61
TOP3B-217ENST00000489581 AKAP5P24588 427 aa18.88■□□□□ 0.61
TOP3B-217ENST00000489581 SPIRE1Q08AE8 756 aa18.88■□□□□ 0.61
TOP3B-217ENST00000489581 PCBP1Q15365 356 aaKnown RBP eCLIP18.88■□□□□ 0.61
TOP3B-217ENST00000489581 EARS2Q5JPH6 523 aaKnown RBP18.88■□□□□ 0.61
TOP3B-217ENST00000489581 FUT10Q6P4F1 479 aa18.88■□□□□ 0.61
TOP3B-217ENST00000489581 CDR2LQ86X02 465 aaPredicted RBP18.88■□□□□ 0.61
TOP3B-217ENST00000489581 KCNG4Q8TDN1 519 aa18.88■□□□□ 0.61
TOP3B-217ENST00000489581 ASAP3Q8TDY4 903 aa18.88■□□□□ 0.61
TOP3B-217ENST00000489581 RIN2Q8WYP3 895 aaPredicted RBP18.88■□□□□ 0.61
TOP3B-217ENST00000489581 RABGGTAQ92696 567 aa18.88■□□□□ 0.61
TOP3B-217ENST00000489581 CCDC51Q96ER9 411 aa18.88■□□□□ 0.61
TOP3B-217ENST00000489581 TRIM6Q9C030 488 aaPredicted RBP18.88■□□□□ 0.61
TOP3B-217ENST00000489581 NXF3Q9H4D5 531 aaKnown RBP18.88■□□□□ 0.61
TOP3B-217ENST00000489581 PLEKHA4Q9H4M7 779 aa18.88■□□□□ 0.61
TOP3B-217ENST00000489581 TBC1D17Q9HA65 648 aa18.88■□□□□ 0.61
TOP3B-217ENST00000489581 GIT1Q9Y2X7 761 aa18.88■□□□□ 0.61
TOP3B-217ENST00000489581 WDR87Q6ZQQ6 2873 aa18.88■□□□□ 0.61
TOP3B-217ENST00000489581 SLITRK3O94933 977 aa18.87■□□□□ 0.61
TOP3B-217ENST00000489581 SRFP11831 508 aa18.87■□□□□ 0.61
TOP3B-217ENST00000489581 MBTD1Q05BQ5 628 aa18.87■□□□□ 0.61
TOP3B-217ENST00000489581 SCRN1Q12765 414 aa18.87■□□□□ 0.61
TOP3B-217ENST00000489581 TFDP1Q14186 410 aa18.87■□□□□ 0.61
TOP3B-217ENST00000489581 AMHR2Q16671 573 aa18.87■□□□□ 0.61
TOP3B-217ENST00000489581 SPECC1Q5M775 1068 aa18.87■□□□□ 0.61
TOP3B-217ENST00000489581 POTEGQ6S5H5 508 aa18.87■□□□□ 0.61
TOP3B-217ENST00000489581 GET4Q7L5D6 327 aaPredicted RBP18.87■□□□□ 0.61
TOP3B-217ENST00000489581 GSTCDQ8NEC7 633 aa18.87■□□□□ 0.61
TOP3B-217ENST00000489581 GPR152Q8TDT2 470 aa18.87■□□□□ 0.61
TOP3B-217ENST00000489581 HDAC7Q8WUI4 952 aa18.87■□□□□ 0.61
TOP3B-217ENST00000489581 NXPE3Q969Y0 559 aa18.87■□□□□ 0.61
TOP3B-217ENST00000489581 PDRG1Q9NUG6 133 aa18.87■□□□□ 0.61
TOP3B-217ENST00000489581 KLK14Q9P0G3 267 aa18.87■□□□□ 0.61
TOP3B-217ENST00000489581 CACNG4Q9UBN1 327 aa18.87■□□□□ 0.61
TOP3B-217ENST00000489581 FANCMQ8IYD8 2048 aa18.86■□□□□ 0.61
TOP3B-217ENST00000489581 MYH15Q9Y2K3 1946 aa18.86■□□□□ 0.61
TOP3B-217ENST00000489581 FAM205CA6NFA0 338 aa18.86■□□□□ 0.61
TOP3B-217ENST00000489581 B4GALT5O43286 388 aa18.86■□□□□ 0.61
TOP3B-217ENST00000489581 BAG4O95429 457 aaKnown RBP18.86■□□□□ 0.61
TOP3B-217ENST00000489581 NPTXRO95502 500 aa18.86■□□□□ 0.61
TOP3B-217ENST00000489581 DCNP07585 359 aaKnown RBP18.86■□□□□ 0.61
TOP3B-217ENST00000489581 LAMP2P13473 410 aa18.86■□□□□ 0.61
TOP3B-217ENST00000489581 XBP1P17861 261 aa18.86■□□□□ 0.61
TOP3B-217ENST00000489581 POU5F1BQ06416 359 aa18.86■□□□□ 0.61
TOP3B-217ENST00000489581 CAPSQ13938 189 aa18.86■□□□□ 0.61
TOP3B-217ENST00000489581 USP41Q3LFD5 358 aa18.86■□□□□ 0.61
TOP3B-217ENST00000489581 LILRA6Q6PI73 481 aa18.86■□□□□ 0.61
TOP3B-217ENST00000489581 ERMP1Q7Z2K6 904 aa18.86■□□□□ 0.61
TOP3B-217ENST00000489581 IFNLR1Q8IU57 520 aaPredicted RBP18.86■□□□□ 0.61
TOP3B-217ENST00000489581 SLFN12Q8IYM2 578 aa18.86■□□□□ 0.61
TOP3B-217ENST00000489581 HACE1Q8IYU2 909 aa18.86■□□□□ 0.61
TOP3B-217ENST00000489581 NAP1L4Q99733 375 aaKnown RBP18.86■□□□□ 0.61
TOP3B-217ENST00000489581 EIF2AK1Q9BQI3 630 aaKnown RBP18.86■□□□□ 0.61
TOP3B-217ENST00000489581 PRKD2Q9BZL6 878 aa18.86■□□□□ 0.61
TOP3B-217ENST00000489581 TM6SF1Q9BZW5 370 aa18.86■□□□□ 0.61
TOP3B-217ENST00000489581 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP18.86■□□□□ 0.61
TOP3B-217ENST00000489581 ZDHHC7Q9NXF8 308 aa18.86■□□□□ 0.61
TOP3B-217ENST00000489581 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18.86■□□□□ 0.61
TOP3B-217ENST00000489581 FNIP2Q9P278 1114 aa18.86■□□□□ 0.61
TOP3B-217ENST00000489581 PARP2Q9UGN5 583 aa18.86■□□□□ 0.61
TOP3B-217ENST00000489581 ADAM28Q9UKQ2 775 aa18.86■□□□□ 0.61
TOP3B-217ENST00000489581 R4GN57 208 aa18.86■□□□□ 0.61
TOP3B-217ENST00000489581 ZNF292O60281 2723 aa18.85■□□□□ 0.61
TOP3B-217ENST00000489581 ARL2P36404 184 aa18.85■□□□□ 0.61
TOP3B-217ENST00000489581 OTOGLQ3ZCN5 2332 aa18.85■□□□□ 0.61
TOP3B-217ENST00000489581 MIA3Q5JRA6 1907 aa18.84■□□□□ 0.61
TOP3B-217ENST00000489581 A0A087WWV3 80 aa18.84■□□□□ 0.61
TOP3B-217ENST00000489581 TADA2AO75478 443 aa18.84■□□□□ 0.61
TOP3B-217ENST00000489581 CDKL5O76039 1030 aa18.84■□□□□ 0.61
TOP3B-217ENST00000489581 PAPLNO95428 1278 aa18.84■□□□□ 0.61
TOP3B-217ENST00000489581 LMNAP02545 664 aaKnown RBP18.84■□□□□ 0.61
TOP3B-217ENST00000489581 GLRA2P23416 452 aa18.84■□□□□ 0.61
TOP3B-217ENST00000489581 PRSS55Q6UWB4 352 aaPredicted RBP18.84■□□□□ 0.61
TOP3B-217ENST00000489581 PAAF1Q9BRP4 392 aa18.84■□□□□ 0.61
TOP3B-217ENST00000489581 SIT1Q9Y3P8 196 aa18.84■□□□□ 0.61
TOP3B-217ENST00000489581 NUMBLQ9Y6R0 609 aa18.84■□□□□ 0.61
TOP3B-217ENST00000489581 STK36Q9NRP7 1315 aa18.83■□□□□ 0.61
TOP3B-217ENST00000489581 TRIP11Q15643 1979 aa18.83■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms