RNA–Protein interactions for RNA: ENST00000489417.5

SND1-214, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 2

Gene SND1, Length 1,447 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-214ENST00000489417 HTTP42858 3142 aa22.73■■□□□ 1.23
SND1-214ENST00000489417 M0QZ92 97 aa22.73■■□□□ 1.23
SND1-214ENST00000489417 ARF4P18085 180 aaPredicted RBP22.73■■□□□ 1.23
SND1-214ENST00000489417 EIF4BP23588 611 aaKnown RBP22.73■■□□□ 1.23
SND1-214ENST00000489417 MCCD1P59942 119 aaPredicted RBP22.73■■□□□ 1.23
SND1-214ENST00000489417 ENPEPQ07075 957 aa22.73■■□□□ 1.23
SND1-214ENST00000489417 TRIM14Q14142 442 aa22.73■■□□□ 1.23
SND1-214ENST00000489417 SNX17Q15036 470 aa22.73■■□□□ 1.23
SND1-214ENST00000489417 PKN2Q16513 984 aaKnown RBP22.73■■□□□ 1.23
SND1-214ENST00000489417 CATSPER4Q7RTX7 472 aa22.73■■□□□ 1.23
SND1-214ENST00000489417 PPFIBP1Q86W92 1011 aa22.73■■□□□ 1.23
SND1-214ENST00000489417 CCDC155Q8N6L0 562 aa22.73■■□□□ 1.23
SND1-214ENST00000489417 SLC43A3Q8NBI5 491 aa22.73■■□□□ 1.23
SND1-214ENST00000489417 PLEKHO2Q8TD55 490 aa22.73■■□□□ 1.23
SND1-214ENST00000489417 TMC2Q8TDI7 906 aa22.73■■□□□ 1.23
SND1-214ENST00000489417 WNT8BQ93098 351 aa22.73■■□□□ 1.23
SND1-214ENST00000489417 PCMTD1Q96MG8 357 aaPredicted RBP22.73■■□□□ 1.23
SND1-214ENST00000489417 CELF4Q9BZC1 486 aaKnown RBP22.73■■□□□ 1.23
SND1-214ENST00000489417 PDZD7Q9H5P4 517 aa22.73■■□□□ 1.23
SND1-214ENST00000489417 SIK3Q9Y2K2 1263 aa22.73■■□□□ 1.23
SND1-214ENST00000489417 TRPV2Q9Y5S1 764 aa22.73■■□□□ 1.23
SND1-214ENST00000489417 OGTO15294 1046 aa22.72■■□□□ 1.23
SND1-214ENST00000489417 FGFR4P22455 802 aa22.72■■□□□ 1.23
SND1-214ENST00000489417 ACOT2P49753 483 aa22.72■■□□□ 1.23
SND1-214ENST00000489417 PTK7Q13308 1070 aa22.72■■□□□ 1.23
SND1-214ENST00000489417 HS1BP3Q53T59 392 aa22.72■■□□□ 1.23
SND1-214ENST00000489417 CRELD2Q6UXH1 353 aaPredicted RBP22.72■■□□□ 1.23
SND1-214ENST00000489417 CPB2Q96IY4 423 aa22.72■■□□□ 1.23
SND1-214ENST00000489417 CDT1Q9H211 546 aa22.72■■□□□ 1.23
SND1-214ENST00000489417 NOD1Q9Y239 953 aa22.72■■□□□ 1.23
SND1-214ENST00000489417 CDY2AQ9Y6F7 541 aa22.72■■□□□ 1.23
SND1-214ENST00000489417 PCNTO95613 3336 aa22.71■■□□□ 1.23
SND1-214ENST00000489417 SFPQP23246 707 aaKnown RBP eCLIP22.71■■□□□ 1.23
SND1-214ENST00000489417 DLG4P78352 724 aa22.71■■□□□ 1.23
SND1-214ENST00000489417 ZBTB41Q5SVQ8 909 aa22.71■■□□□ 1.23
SND1-214ENST00000489417 USP37Q86T82 979 aa22.71■■□□□ 1.23
SND1-214ENST00000489417 CDR2LQ86X02 465 aaPredicted RBP22.71■■□□□ 1.23
SND1-214ENST00000489417 CCDC150Q8NCX0 1101 aa22.71■■□□□ 1.23
SND1-214ENST00000489417 ZNF333Q96JL9 665 aa22.71■■□□□ 1.23
SND1-214ENST00000489417 SEZ6LQ9BYH1 1024 aa22.71■■□□□ 1.23
SND1-214ENST00000489417 TRMT13Q9NUP7 481 aaKnown RBP22.71■■□□□ 1.23
SND1-214ENST00000489417 ARVCFO00192 962 aa22.7■■□□□ 1.22
SND1-214ENST00000489417 FAM189A1O60320 539 aa22.7■■□□□ 1.22
SND1-214ENST00000489417 TPM1P09493 284 aa22.7■■□□□ 1.22
SND1-214ENST00000489417 MCF2P10911 925 aa22.7■■□□□ 1.22
SND1-214ENST00000489417 FMO5P49326 533 aa22.7■■□□□ 1.22
SND1-214ENST00000489417 KLK7P49862 253 aa22.7■■□□□ 1.22
SND1-214ENST00000489417 NCBP1Q09161 790 aaKnown RBP22.7■■□□□ 1.22
SND1-214ENST00000489417 KCNMA1Q12791 1236 aa22.7■■□□□ 1.22
SND1-214ENST00000489417 PSMD6Q15008 389 aa22.7■■□□□ 1.22
SND1-214ENST00000489417 C1orf220Q5T0J3 134 aa22.7■■□□□ 1.22
SND1-214ENST00000489417 PARD3BQ8TEW8 1205 aa22.7■■□□□ 1.22
SND1-214ENST00000489417 TMEM40Q8WWA1 233 aa22.7■■□□□ 1.22
SND1-214ENST00000489417 CCDC127Q96BQ5 260 aa22.7■■□□□ 1.22
SND1-214ENST00000489417 ARMC5Q96C12 935 aa22.7■■□□□ 1.22
SND1-214ENST00000489417 NUP58Q9BVL2 599 aa22.7■■□□□ 1.22
SND1-214ENST00000489417 RBAKQ9NYW8 714 aaPredicted RBP22.7■■□□□ 1.22
SND1-214ENST00000489417 CEP350Q5VT06 3117 aa22.7■■□□□ 1.22
SND1-214ENST00000489417 GTPBP10A4D1E9 387 aaKnown RBP22.69■■□□□ 1.22
SND1-214ENST00000489417 STX10O60499 249 aa22.69■■□□□ 1.22
SND1-214ENST00000489417 N4BP1O75113 896 aaKnown RBP22.69■■□□□ 1.22
SND1-214ENST00000489417 GYPCP04921 128 aa22.69■■□□□ 1.22
SND1-214ENST00000489417 RBL2Q08999 1139 aa22.69■■□□□ 1.22
SND1-214ENST00000489417 ARID5BQ14865 1188 aa22.69■■□□□ 1.22
SND1-214ENST00000489417 DHX38Q92620 1227 aaKnown RBP22.69■■□□□ 1.22
SND1-214ENST00000489417 MMRN2Q9H8L6 949 aa22.69■■□□□ 1.22
SND1-214ENST00000489417 A0A1B0GUA9 196 aa22.68■■□□□ 1.22
SND1-214ENST00000489417 LRRIQ3A6PVS8 624 aaPredicted RBP22.68■■□□□ 1.22
SND1-214ENST00000489417 CTSHP09668 335 aa22.68■■□□□ 1.22
SND1-214ENST00000489417 AXLP30530 894 aa22.68■■□□□ 1.22
SND1-214ENST00000489417 THPOP40225 353 aa22.68■■□□□ 1.22
SND1-214ENST00000489417 MYL7Q01449 175 aa22.68■■□□□ 1.22
SND1-214ENST00000489417 MGAT3Q09327 533 aa22.68■■□□□ 1.22
SND1-214ENST00000489417 TRIM71Q2Q1W2 868 aaKnown RBP22.68■■□□□ 1.22
SND1-214ENST00000489417 CBWD6Q4V339 395 aa22.68■■□□□ 1.22
SND1-214ENST00000489417 SEZ6Q53EL9 994 aa22.68■■□□□ 1.22
SND1-214ENST00000489417 CBWD3Q5JTY5 395 aa22.68■■□□□ 1.22
SND1-214ENST00000489417 CBWD5Q5RIA9 395 aa22.68■■□□□ 1.22
SND1-214ENST00000489417 GBP6Q6ZN66 633 aa22.68■■□□□ 1.22
SND1-214ENST00000489417 BRSK2Q8IWQ3 736 aa22.68■■□□□ 1.22
SND1-214ENST00000489417 CPLX3Q8WVH0 158 aa22.68■■□□□ 1.22
SND1-214ENST00000489417 IQCDQ96DY2 449 aa22.68■■□□□ 1.22
SND1-214ENST00000489417 ADPGKQ9BRR6 497 aa22.68■■□□□ 1.22
SND1-214ENST00000489417 CRACR2AQ9BSW2 395 aa22.68■■□□□ 1.22
SND1-214ENST00000489417 LSM14BQ9BX40 385 aaKnown RBP22.68■■□□□ 1.22
SND1-214ENST00000489417 SENP6Q9GZR1 1112 aaPredicted RBP22.68■■□□□ 1.22
SND1-214ENST00000489417 CPSF3Q9UKF6 684 aaKnown RBP22.68■■□□□ 1.22
SND1-214ENST00000489417 AKR1B15C9JRZ8 316 aaPredicted RBP22.67■■□□□ 1.22
SND1-214ENST00000489417 TULP1O00294 542 aaPredicted RBP22.67■■□□□ 1.22
SND1-214ENST00000489417 CHRNA1P02708 482 aa22.67■■□□□ 1.22
SND1-214ENST00000489417 TRIM21P19474 475 aaKnown RBP22.67■■□□□ 1.22
SND1-214ENST00000489417 HOXA11P31270 313 aaPredicted RBP22.67■■□□□ 1.22
SND1-214ENST00000489417 TNFSF9P41273 254 aa22.67■■□□□ 1.22
SND1-214ENST00000489417 PPP3CAQ08209 521 aa22.67■■□□□ 1.22
SND1-214ENST00000489417 EXOC3L4Q17RC7 722 aa22.67■■□□□ 1.22
SND1-214ENST00000489417 FIGNQ5HY92 759 aa22.67■■□□□ 1.22
SND1-214ENST00000489417 APBB1IPQ7Z5R6 666 aaPredicted RBP22.67■■□□□ 1.22
SND1-214ENST00000489417 THNSL1Q8IYQ7 743 aa22.67■■□□□ 1.22
SND1-214ENST00000489417 NEK11Q8NG66 645 aa22.67■■□□□ 1.22
SND1-214ENST00000489417 CACTINQ8WUQ7 758 aaKnown RBP22.67■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms