RNA–Protein interactions for RNA: ENST00000489414.5

EXOSC3-206, Transcript of exosome component 3, humanhuman

TSL 4

Gene EXOSC3, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-206ENST00000489414 RPS6KA5O75582 802 aa8.71□□□□□ -1.02
EXOSC3-206ENST00000489414 ITGB2P05107 769 aa8.71□□□□□ -1.02
EXOSC3-206ENST00000489414 GALTP07902 379 aa8.71□□□□□ -1.02
EXOSC3-206ENST00000489414 NUDT7P0C024 238 aa8.71□□□□□ -1.02
EXOSC3-206ENST00000489414 TMPRSS3P57727 454 aa8.71□□□□□ -1.02
EXOSC3-206ENST00000489414 NFKB2Q00653 900 aa8.71□□□□□ -1.02
EXOSC3-206ENST00000489414 SEMG2Q02383 582 aa8.71□□□□□ -1.02
EXOSC3-206ENST00000489414 MINDY1Q8N5J2 469 aa8.71□□□□□ -1.02
EXOSC3-206ENST00000489414 HELQQ8TDG4 1101 aa8.71□□□□□ -1.02
EXOSC3-206ENST00000489414 SYTL5Q8TDW5 730 aaPredicted RBP8.71□□□□□ -1.02
EXOSC3-206ENST00000489414 SNRNP27Q8WVK2 155 aaKnown RBP8.71□□□□□ -1.02
EXOSC3-206ENST00000489414 TMEM40Q8WWA1 233 aa8.71□□□□□ -1.02
EXOSC3-206ENST00000489414 RMDN3Q96TC7 470 aa8.71□□□□□ -1.02
EXOSC3-206ENST00000489414 DBNDD2Q9BQY9 259 aa8.71□□□□□ -1.02
EXOSC3-206ENST00000489414 GTPBP2Q9BX10 602 aaKnown RBP8.71□□□□□ -1.02
EXOSC3-206ENST00000489414 CPNE5Q9HCH3 593 aa8.71□□□□□ -1.02
EXOSC3-206ENST00000489414 FSCN3Q9NQT6 498 aa8.71□□□□□ -1.02
EXOSC3-206ENST00000489414 TMEM74BQ9NUR3 256 aa8.71□□□□□ -1.02
EXOSC3-206ENST00000489414 GAS2O43903 313 aaKnown RBP8.7□□□□□ -1.02
EXOSC3-206ENST00000489414 ATP9AO75110 1047 aa8.7□□□□□ -1.02
EXOSC3-206ENST00000489414 GJB3O75712 270 aa8.7□□□□□ -1.02
EXOSC3-206ENST00000489414 URODP06132 367 aa8.7□□□□□ -1.02
EXOSC3-206ENST00000489414 NR3C2P08235 984 aa8.7□□□□□ -1.02
EXOSC3-206ENST00000489414 TGFB3P10600 412 aa8.7□□□□□ -1.02
EXOSC3-206ENST00000489414 DHPSP49366 369 aaPredicted RBP8.7□□□□□ -1.02
EXOSC3-206ENST00000489414 AK2P54819 239 aa8.7□□□□□ -1.02
EXOSC3-206ENST00000489414 KRT76Q01546 638 aa8.7□□□□□ -1.02
EXOSC3-206ENST00000489414 TLE1Q04724 770 aa8.7□□□□□ -1.02
EXOSC3-206ENST00000489414 RNASELQ05823 741 aaKnown RBP8.7□□□□□ -1.02
EXOSC3-206ENST00000489414 SMAD1Q15797 465 aaKnown RBP8.7□□□□□ -1.02
EXOSC3-206ENST00000489414 CTR9Q6PD62 1173 aa8.7□□□□□ -1.02
EXOSC3-206ENST00000489414 TXNDC11Q6PKC3 985 aa8.7□□□□□ -1.02
EXOSC3-206ENST00000489414 SYT12Q8IV01 421 aa8.7□□□□□ -1.02
EXOSC3-206ENST00000489414 CLUAP1Q96AJ1 413 aa8.7□□□□□ -1.02
EXOSC3-206ENST00000489414 RXFP1Q9HBX9 757 aa8.7□□□□□ -1.02
EXOSC3-206ENST00000489414 STARD5Q9NSY2 213 aa8.7□□□□□ -1.02
EXOSC3-206ENST00000489414 GDE1Q9NZC3 331 aa8.7□□□□□ -1.02
EXOSC3-206ENST00000489414 EBF1Q9UH73 591 aa8.7□□□□□ -1.02
EXOSC3-206ENST00000489414 PNMA2Q9UL42 364 aa8.7□□□□□ -1.02
EXOSC3-206ENST00000489414 KCNH3Q9ULD8 1083 aa8.7□□□□□ -1.02
EXOSC3-206ENST00000489414 CABIN1Q9Y6J0 2220 aa8.7□□□□□ -1.02
EXOSC3-206ENST00000489414 FN1P02751 2386 aaKnown RBP8.69□□□□□ -1.02
EXOSC3-206ENST00000489414 GPR182O15218 404 aa8.69□□□□□ -1.02
EXOSC3-206ENST00000489414 EIF2AK2P19525 551 aaKnown RBP8.69□□□□□ -1.02
EXOSC3-206ENST00000489414 BCKDHBP21953 392 aa8.69□□□□□ -1.02
EXOSC3-206ENST00000489414 GDI1P31150 447 aa8.69□□□□□ -1.02
EXOSC3-206ENST00000489414 CCDC173Q0VFZ6 552 aa8.69□□□□□ -1.02
EXOSC3-206ENST00000489414 ODR4Q5SWX8 454 aa8.69□□□□□ -1.02
EXOSC3-206ENST00000489414 UTP14CQ5TAP6 766 aaKnown RBP8.69□□□□□ -1.02
EXOSC3-206ENST00000489414 PEAR1Q5VY43 1037 aaPredicted RBP8.69□□□□□ -1.02
EXOSC3-206ENST00000489414 LILRA6Q6PI73 481 aa8.69□□□□□ -1.02
EXOSC3-206ENST00000489414 BTNL9Q6UXG8 535 aa8.69□□□□□ -1.02
EXOSC3-206ENST00000489414 ECHDC2Q86YB7 292 aa8.69□□□□□ -1.02
EXOSC3-206ENST00000489414 OR2I1PQ8NGU4 316 aa8.69□□□□□ -1.02
EXOSC3-206ENST00000489414 ING5Q8WYH8 240 aa8.69□□□□□ -1.02
EXOSC3-206ENST00000489414 GPKOWQ92917 476 aaPredicted RBP eCLIP8.69□□□□□ -1.02
EXOSC3-206ENST00000489414 HHIPQ96QV1 700 aa8.69□□□□□ -1.02
EXOSC3-206ENST00000489414 MAF1Q9H063 256 aa8.69□□□□□ -1.02
EXOSC3-206ENST00000489414 NRDE2Q9H7Z3 1164 aa8.69□□□□□ -1.02
EXOSC3-206ENST00000489414 ARMT1Q9H993 441 aa8.69□□□□□ -1.02
EXOSC3-206ENST00000489414 PPP4R2Q9NY27 417 aa8.69□□□□□ -1.02
EXOSC3-206ENST00000489414 PLA2G2EQ9NZK7 142 aa8.69□□□□□ -1.02
EXOSC3-206ENST00000489414 PCOLCE2Q9UKZ9 415 aa8.69□□□□□ -1.02
EXOSC3-206ENST00000489414 SSX2IPQ9Y2D8 614 aa8.69□□□□□ -1.02
EXOSC3-206ENST00000489414 ABCB11O95342 1321 aa8.69□□□□□ -1.02
EXOSC3-206ENST00000489414 WDR19Q8NEZ3 1342 aa8.69□□□□□ -1.02
EXOSC3-206ENST00000489414 PLIN4Q96Q06 1357 aa8.69□□□□□ -1.02
EXOSC3-206ENST00000489414 HELZP42694 1942 aaKnown RBP8.68□□□□□ -1.02
EXOSC3-206ENST00000489414 TCRBV5S4A2TA0A5A2 114 aa8.68□□□□□ -1.02
EXOSC3-206ENST00000489414 B4E1Z4 1266 aa8.68□□□□□ -1.02
EXOSC3-206ENST00000489414 NRG2O14511 850 aaPredicted RBP8.68□□□□□ -1.02
EXOSC3-206ENST00000489414 ZNF862O60290 1169 aa8.68□□□□□ -1.02
EXOSC3-206ENST00000489414 SOD2P04179 222 aa8.68□□□□□ -1.02
EXOSC3-206ENST00000489414 UBTFL1P0CB47 393 aaPredicted RBP8.68□□□□□ -1.02
EXOSC3-206ENST00000489414 PDE6AP16499 860 aa8.68□□□□□ -1.02
EXOSC3-206ENST00000489414 SLC16A2P36021 539 aa8.68□□□□□ -1.02
EXOSC3-206ENST00000489414 SOX9P48436 509 aa8.68□□□□□ -1.02
EXOSC3-206ENST00000489414 SLC11A1P49279 550 aa8.68□□□□□ -1.02
EXOSC3-206ENST00000489414 UCNP55089 124 aa8.68□□□□□ -1.02
EXOSC3-206ENST00000489414 C2orf27AQ580R0 203 aa8.68□□□□□ -1.02
EXOSC3-206ENST00000489414 ARHGEF16Q5VV41 709 aa8.68□□□□□ -1.02
EXOSC3-206ENST00000489414 METTL7BQ6UX53 244 aa8.68□□□□□ -1.02
EXOSC3-206ENST00000489414 ZNF598Q86UK7 904 aaKnown RBP8.68□□□□□ -1.02
EXOSC3-206ENST00000489414 PALB2Q86YC2 1186 aa8.68□□□□□ -1.02
EXOSC3-206ENST00000489414 SRRM1Q8IYB3 904 aaKnown RBP8.68□□□□□ -1.02
EXOSC3-206ENST00000489414 TBC1D5Q92609 795 aa8.68□□□□□ -1.02
EXOSC3-206ENST00000489414 FGF11Q92914 225 aa8.68□□□□□ -1.02
EXOSC3-206ENST00000489414 REPIN1Q9BWE0 567 aaKnown RBP8.68□□□□□ -1.02
EXOSC3-206ENST00000489414 CSRNP2Q9H175 543 aa8.68□□□□□ -1.02
EXOSC3-206ENST00000489414 C8orf33Q9H7E9 229 aaPredicted RBP8.68□□□□□ -1.02
EXOSC3-206ENST00000489414 CAPN10Q9HC96 672 aa8.68□□□□□ -1.02
EXOSC3-206ENST00000489414 PXMP2Q9NR77 195 aa8.68□□□□□ -1.02
EXOSC3-206ENST00000489414 CHST12Q9NRB3 414 aa8.68□□□□□ -1.02
EXOSC3-206ENST00000489414 POLR3BQ9NW08 1133 aaPredicted RBP8.68□□□□□ -1.02
EXOSC3-206ENST00000489414 SALL2Q9Y467 1007 aaPredicted RBP8.68□□□□□ -1.02
EXOSC3-206ENST00000489414 TELO2Q9Y4R8 837 aa8.68□□□□□ -1.02
EXOSC3-206ENST00000489414 MYBPHLA2RUH7 354 aa8.67□□□□□ -1.02
EXOSC3-206ENST00000489414 C2orf72A6NCS6 295 aa8.67□□□□□ -1.02
EXOSC3-206ENST00000489414 TNFRSF10BO14763 440 aa8.67□□□□□ -1.02
EXOSC3-206ENST00000489414 ATG13O75143 517 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms