RNA–Protein interactions for RNA: ENST00000489357.5

VTI1A-207, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 3

Gene VTI1A, Length 444 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-207ENST00000489357 RPIAP49247 311 aa9.2□□□□□ -0.94
VTI1A-207ENST00000489357 FLT3LGP49771 235 aa9.2□□□□□ -0.94
VTI1A-207ENST00000489357 MRPS9P82933 396 aaKnown RBP9.2□□□□□ -0.94
VTI1A-207ENST00000489357 GTF2BQ00403 316 aa9.2□□□□□ -0.94
VTI1A-207ENST00000489357 PRKCZQ05513 592 aa9.2□□□□□ -0.94
VTI1A-207ENST00000489357 RAD51AP2Q09MP3 1159 aa9.2□□□□□ -0.94
VTI1A-207ENST00000489357 KLHL30Q0D2K2 578 aa9.2□□□□□ -0.94
VTI1A-207ENST00000489357 MAPK7Q13164 816 aa9.2□□□□□ -0.94
VTI1A-207ENST00000489357 GPS2Q13227 327 aa9.2□□□□□ -0.94
VTI1A-207ENST00000489357 NAB2Q15742 525 aa9.2□□□□□ -0.94
VTI1A-207ENST00000489357 GNPTABQ3T906 1256 aa9.2□□□□□ -0.94
VTI1A-207ENST00000489357 TDRD12Q587J7 1177 aaKnown RBP9.2□□□□□ -0.94
VTI1A-207ENST00000489357 ARHGEF16Q5VV41 709 aa9.2□□□□□ -0.94
VTI1A-207ENST00000489357 CC2D1AQ6P1N0 951 aaPredicted RBP9.2□□□□□ -0.94
VTI1A-207ENST00000489357 PLEKHH3Q7Z736 793 aa9.2□□□□□ -0.94
VTI1A-207ENST00000489357 VSIG10LQ86VR7 867 aa9.2□□□□□ -0.94
VTI1A-207ENST00000489357 ARMC2Q8NEN0 867 aa9.2□□□□□ -0.94
VTI1A-207ENST00000489357 CHST13Q8NET6 341 aa9.2□□□□□ -0.94
VTI1A-207ENST00000489357 DNERQ8NFT8 737 aa9.2□□□□□ -0.94
VTI1A-207ENST00000489357 EPS8L1Q8TE68 723 aa9.2□□□□□ -0.94
VTI1A-207ENST00000489357 PIGOQ8TEQ8 1089 aa9.2□□□□□ -0.94
VTI1A-207ENST00000489357 PKNOX2Q96KN3 472 aa9.2□□□□□ -0.94
VTI1A-207ENST00000489357 CCDC43Q96MW1 224 aaKnown RBP9.2□□□□□ -0.94
VTI1A-207ENST00000489357 ACCSQ96QU6 501 aa9.2□□□□□ -0.94
VTI1A-207ENST00000489357 RMDN3Q96TC7 470 aa9.2□□□□□ -0.94
VTI1A-207ENST00000489357 NTPCRQ9BSD7 190 aaKnown RBP9.2□□□□□ -0.94
VTI1A-207ENST00000489357 PAGR1Q9BTK6 254 aa9.2□□□□□ -0.94
VTI1A-207ENST00000489357 TEX13BQ9BXU2 312 aa9.2□□□□□ -0.94
VTI1A-207ENST00000489357 PARD6BQ9BYG5 372 aa9.2□□□□□ -0.94
VTI1A-207ENST00000489357 ACBD3Q9H3P7 528 aa9.2□□□□□ -0.94
VTI1A-207ENST00000489357 RAVER2Q9HCJ3 691 aaKnown RBP9.2□□□□□ -0.94
VTI1A-207ENST00000489357 PRM3Q9NNZ6 103 aa9.2□□□□□ -0.94
VTI1A-207ENST00000489357 COL20A1Q9P218 1284 aa9.2□□□□□ -0.94
VTI1A-207ENST00000489357 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.2□□□□□ -0.94
VTI1A-207ENST00000489357 FBXO40Q9UH90 709 aa9.2□□□□□ -0.94
VTI1A-207ENST00000489357 HYOU1Q9Y4L1 999 aa9.2□□□□□ -0.94
VTI1A-207ENST00000489357 PCDHGC5Q9Y5F6 944 aa9.2□□□□□ -0.94
VTI1A-207ENST00000489357 PTCH2Q9Y6C5 1203 aa9.2□□□□□ -0.94
VTI1A-207ENST00000489357 V9GYY5 206 aaPredicted RBP9.2□□□□□ -0.94
VTI1A-207ENST00000489357 MYH11P35749 1972 aa9.2□□□□□ -0.94
VTI1A-207ENST00000489357 GRID2IPA4D2P6 1211 aa9.19□□□□□ -0.94
VTI1A-207ENST00000489357 TNPO2O14787 897 aaKnown RBP9.19□□□□□ -0.94
VTI1A-207ENST00000489357 KIAA0391O15091 583 aaKnown RBP9.19□□□□□ -0.94
VTI1A-207ENST00000489357 HIP1RO75146 1068 aa9.19□□□□□ -0.94
VTI1A-207ENST00000489357 EIF3JO75822 258 aaKnown RBP9.19□□□□□ -0.94
VTI1A-207ENST00000489357 PNMA6AP0CW24 399 aaPredicted RBP9.19□□□□□ -0.94
VTI1A-207ENST00000489357 KRT13P13646 458 aa9.19□□□□□ -0.94
VTI1A-207ENST00000489357 YWHABP31946 246 aaKnown RBP9.19□□□□□ -0.94
VTI1A-207ENST00000489357 SLC19A1P41440 591 aa9.19□□□□□ -0.94
VTI1A-207ENST00000489357 STAT1P42224 750 aa9.19□□□□□ -0.94
VTI1A-207ENST00000489357 FMO5P49326 533 aa9.19□□□□□ -0.94
VTI1A-207ENST00000489357 SMTNP53814 917 aa9.19□□□□□ -0.94
VTI1A-207ENST00000489357 NCKAP1LP55160 1127 aa9.19□□□□□ -0.94
VTI1A-207ENST00000489357 NPEPPSP55786 919 aa9.19□□□□□ -0.94
VTI1A-207ENST00000489357 JAM2P57087 298 aa9.19□□□□□ -0.94
VTI1A-207ENST00000489357 BFSP1Q12934 665 aa9.19□□□□□ -0.94
VTI1A-207ENST00000489357 ITGB3BPQ13352 177 aaPredicted RBP9.19□□□□□ -0.94
VTI1A-207ENST00000489357 RAPGEF1Q13905 1077 aa9.19□□□□□ -0.94
VTI1A-207ENST00000489357 CLUL1Q15846 466 aa9.19□□□□□ -0.94
VTI1A-207ENST00000489357 GLE1Q53GS7 698 aaKnown RBP9.19□□□□□ -0.94
VTI1A-207ENST00000489357 DPY19L2P1Q6NXN4 242 aa9.19□□□□□ -0.94
VTI1A-207ENST00000489357 LIAT1Q6ZQX7 453 aa9.19□□□□□ -0.94
VTI1A-207ENST00000489357 LRRN4CLQ8ND94 238 aa9.19□□□□□ -0.94
VTI1A-207ENST00000489357 MCPH1Q8NEM0 835 aa9.19□□□□□ -0.94
VTI1A-207ENST00000489357 LMBR1Q8WVP7 490 aa9.19□□□□□ -0.94
VTI1A-207ENST00000489357 KIFAP3Q92845 792 aa9.19□□□□□ -0.94
VTI1A-207ENST00000489357 FAM81BQ96LP2 452 aa9.19□□□□□ -0.94
VTI1A-207ENST00000489357 STK33Q9BYT3 514 aa9.19□□□□□ -0.94
VTI1A-207ENST00000489357 ACAD9Q9H845 621 aa9.19□□□□□ -0.94
VTI1A-207ENST00000489357 RNF146Q9NTX7 359 aa9.19□□□□□ -0.94
VTI1A-207ENST00000489357 ZNF446Q9NWS9 450 aa9.19□□□□□ -0.94
VTI1A-207ENST00000489357 GCNT4Q9P109 453 aa9.19□□□□□ -0.94
VTI1A-207ENST00000489357 PPME1Q9Y570 386 aa9.19□□□□□ -0.94
VTI1A-207ENST00000489357 PCDHA10Q9Y5I2 948 aa9.19□□□□□ -0.94
VTI1A-207ENST00000489357 FHOD1Q9Y613 1164 aa9.19□□□□□ -0.94
VTI1A-207ENST00000489357 PFASO15067 1338 aa9.19□□□□□ -0.94
VTI1A-207ENST00000489357 LOC102724159A0A0B4J2E5 919 aa9.18□□□□□ -0.94
VTI1A-207ENST00000489357 A0A0U1RQJ8 604 aa9.18□□□□□ -0.94
VTI1A-207ENST00000489357 MACROD2A1Z1Q3 448 aa9.18□□□□□ -0.94
VTI1A-207ENST00000489357 K7ENM7 598 aa9.18□□□□□ -0.94
VTI1A-207ENST00000489357 NKRFO15226 690 aaKnown RBP eCLIP9.18□□□□□ -0.94
VTI1A-207ENST00000489357 ABL1P00519 1130 aa9.18□□□□□ -0.94
VTI1A-207ENST00000489357 ATP1A1P05023 1023 aaKnown RBP9.18□□□□□ -0.94
VTI1A-207ENST00000489357 PLEKP08567 350 aaPredicted RBP9.18□□□□□ -0.94
VTI1A-207ENST00000489357 ZSCAN20P17040 1043 aaPredicted RBP9.18□□□□□ -0.94
VTI1A-207ENST00000489357 NMT1P30419 496 aaKnown RBP9.18□□□□□ -0.94
VTI1A-207ENST00000489357 ICAM3P32942 547 aa9.18□□□□□ -0.94
VTI1A-207ENST00000489357 PAFAH1B1P43034 410 aa9.18□□□□□ -0.94
VTI1A-207ENST00000489357 RGS19P49795 217 aa9.18□□□□□ -0.94
VTI1A-207ENST00000489357 CYP27A1Q02318 531 aa9.18□□□□□ -0.94
VTI1A-207ENST00000489357 PWP2Q15269 919 aaKnown RBP9.18□□□□□ -0.94
VTI1A-207ENST00000489357 MUM1L1Q5H9M0 696 aa9.18□□□□□ -0.94
VTI1A-207ENST00000489357 DCAF17Q5H9S7 520 aaPredicted RBP9.18□□□□□ -0.94
VTI1A-207ENST00000489357 MAP3K21Q5TCX8 1036 aa9.18□□□□□ -0.94
VTI1A-207ENST00000489357 TCERG1LQ5VWI1 586 aa9.18□□□□□ -0.94
VTI1A-207ENST00000489357 HDXQ7Z353 690 aa9.18□□□□□ -0.94
VTI1A-207ENST00000489357 IRF2BP2Q7Z5L9 587 aa9.18□□□□□ -0.94
VTI1A-207ENST00000489357 SYCP3Q8IZU3 236 aa9.18□□□□□ -0.94
VTI1A-207ENST00000489357 SYCE1Q8N0S2 351 aa9.18□□□□□ -0.94
VTI1A-207ENST00000489357 CPXCR1Q8N123 301 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms