RNA–Protein interactions for RNA: ENST00000489352.5

HDAC6-233, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 585 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-233ENST00000489352 DEFB124Q8NES8 71 aa13.03□□□□□ -0.32
HDAC6-233ENST00000489352 PI4K2BQ8TCG2 481 aa13.03□□□□□ -0.32
HDAC6-233ENST00000489352 FAM200AQ8TCP9 573 aa13.03□□□□□ -0.32
HDAC6-233ENST00000489352 EVI5LQ96CN4 794 aa13.03□□□□□ -0.32
HDAC6-233ENST00000489352 RRP36Q96EU6 259 aaKnown RBP13.03□□□□□ -0.32
HDAC6-233ENST00000489352 FAM227BQ96M60 508 aa13.03□□□□□ -0.32
HDAC6-233ENST00000489352 COLEC11Q9BWP8 271 aa13.03□□□□□ -0.32
HDAC6-233ENST00000489352 ZFP14Q9HCL3 533 aa13.03□□□□□ -0.32
HDAC6-233ENST00000489352 CACNA2D2Q9NY47 1150 aa13.03□□□□□ -0.32
HDAC6-233ENST00000489352 PCNX2A6NKB5 2137 aa13.03□□□□□ -0.32
HDAC6-233ENST00000489352 KALRNO60229 2985 aa13.02□□□□□ -0.32
HDAC6-233ENST00000489352 ACACAQ13085 2346 aa13.02□□□□□ -0.32
HDAC6-233ENST00000489352 H0Y626 953 aa13.02□□□□□ -0.33
HDAC6-233ENST00000489352 CYTH3O43739 400 aa13.02□□□□□ -0.33
HDAC6-233ENST00000489352 RHOBTB1O94844 696 aa13.02□□□□□ -0.33
HDAC6-233ENST00000489352 TRIM16O95361 564 aa13.02□□□□□ -0.33
HDAC6-233ENST00000489352 GDI1P31150 447 aa13.02□□□□□ -0.33
HDAC6-233ENST00000489352 HOXA9P31269 272 aa13.02□□□□□ -0.33
HDAC6-233ENST00000489352 GAS6Q14393 721 aa13.02□□□□□ -0.33
HDAC6-233ENST00000489352 GRM4Q14833 912 aa13.02□□□□□ -0.33
HDAC6-233ENST00000489352 C1orf228Q6PIY5 440 aa13.02□□□□□ -0.33
HDAC6-233ENST00000489352 CSGALNACT1Q8TDX6 532 aa13.02□□□□□ -0.33
HDAC6-233ENST00000489352 B3GALT6Q96L58 329 aa13.02□□□□□ -0.33
HDAC6-233ENST00000489352 APOL6Q9BWW8 343 aa13.02□□□□□ -0.33
HDAC6-233ENST00000489352 CNNM2Q9H8M5 875 aa13.02□□□□□ -0.33
HDAC6-233ENST00000489352 ZNF334Q9HCZ1 680 aaPredicted RBP13.02□□□□□ -0.33
HDAC6-233ENST00000489352 CHST7Q9NS84 486 aa13.02□□□□□ -0.33
HDAC6-233ENST00000489352 PCDHA6Q9UN73 950 aa13.02□□□□□ -0.33
HDAC6-233ENST00000489352 PCDHB2Q9Y5E7 798 aa13.02□□□□□ -0.33
HDAC6-233ENST00000489352 PCDHA8Q9Y5H6 950 aa13.02□□□□□ -0.33
HDAC6-233ENST00000489352 CNTNAP2Q9UHC6 1331 aa13.02□□□□□ -0.33
HDAC6-233ENST00000489352 NOTCH4Q99466 2003 aa13.01□□□□□ -0.33
HDAC6-233ENST00000489352 ASXL3Q9C0F0 2248 aa13.01□□□□□ -0.33
HDAC6-233ENST00000489352 A0A0D9SFI3 127 aa13.01□□□□□ -0.33
HDAC6-233ENST00000489352 KHNYNO15037 678 aaKnown RBP13.01□□□□□ -0.33
HDAC6-233ENST00000489352 KPNA1P52294 538 aaPredicted RBP13.01□□□□□ -0.33
HDAC6-233ENST00000489352 ITGB3BPQ13352 177 aaPredicted RBP13.01□□□□□ -0.33
HDAC6-233ENST00000489352 DGKKQ5KSL6 1271 aa13.01□□□□□ -0.33
HDAC6-233ENST00000489352 CATSPER4Q7RTX7 472 aa13.01□□□□□ -0.33
HDAC6-233ENST00000489352 ZC3H10Q96K80 434 aaKnown RBP13.01□□□□□ -0.33
HDAC6-233ENST00000489352 CCDC86Q9H6F5 360 aaKnown RBP13.01□□□□□ -0.33
HDAC6-233ENST00000489352 AGO4Q9HCK5 861 aaKnown RBP13.01□□□□□ -0.33
HDAC6-233ENST00000489352 RBM12Q9NTZ6 932 aaKnown RBP13.01□□□□□ -0.33
HDAC6-233ENST00000489352 HCFC1R1Q9NWW0 138 aa13.01□□□□□ -0.33
HDAC6-233ENST00000489352 MARCH5Q9NX47 278 aa13.01□□□□□ -0.33
HDAC6-233ENST00000489352 FBXW11Q9UKB1 542 aa13.01□□□□□ -0.33
HDAC6-233ENST00000489352 EML5Q05BV3 1969 aa13.01□□□□□ -0.33
HDAC6-233ENST00000489352 HECTD1Q9ULT8 2610 aa13□□□□□ -0.33
HDAC6-233ENST00000489352 ASCC3Q8N3C0 2202 aaKnown RBP13□□□□□ -0.33
HDAC6-233ENST00000489352 LNP1A1A4G5 178 aa13□□□□□ -0.33
HDAC6-233ENST00000489352 ERICH2A1L162 156 aa13□□□□□ -0.33
HDAC6-233ENST00000489352 ZNF263O14978 683 aa13□□□□□ -0.33
HDAC6-233ENST00000489352 AKAP3O75969 853 aa13□□□□□ -0.33
HDAC6-233ENST00000489352 PRB1P04280 392 aa13□□□□□ -0.33
HDAC6-233ENST00000489352 ATP4AP20648 1035 aa13□□□□□ -0.33
HDAC6-233ENST00000489352 ZNF76P36508 570 aa13□□□□□ -0.33
HDAC6-233ENST00000489352 PXNP49023 591 aaPredicted RBP13□□□□□ -0.33
HDAC6-233ENST00000489352 SIM1P81133 766 aaPredicted RBP13□□□□□ -0.33
HDAC6-233ENST00000489352 SCAPQ12770 1279 aa13□□□□□ -0.33
HDAC6-233ENST00000489352 UBE2SQ16763 222 aa13□□□□□ -0.33
HDAC6-233ENST00000489352 SLC35G1Q2M3R5 365 aa13□□□□□ -0.33
HDAC6-233ENST00000489352 LARP1BQ659C4 914 aaKnown RBP13□□□□□ -0.33
HDAC6-233ENST00000489352 AGMOQ6ZNB7 445 aa13□□□□□ -0.33
HDAC6-233ENST00000489352 ZNF589Q86UQ0 364 aaPredicted RBP13□□□□□ -0.33
HDAC6-233ENST00000489352 GPR65Q8IYL9 337 aa13□□□□□ -0.33
HDAC6-233ENST00000489352 SLC7A14Q8TBB6 771 aa13□□□□□ -0.33
HDAC6-233ENST00000489352 MSANTD3Q96H12 275 aa13□□□□□ -0.33
HDAC6-233ENST00000489352 FAM167AQ96KS9 214 aa13□□□□□ -0.33
HDAC6-233ENST00000489352 MBOAT7Q96N66 472 aa13□□□□□ -0.33
HDAC6-233ENST00000489352 LY9Q9HBG7 655 aa13□□□□□ -0.33
HDAC6-233ENST00000489352 UBN1Q9NPG3 1134 aa13□□□□□ -0.33
HDAC6-233ENST00000489352 TRPV5Q9NQA5 729 aa13□□□□□ -0.33
HDAC6-233ENST00000489352 NRBP2Q9NSY0 501 aa13□□□□□ -0.33
HDAC6-233ENST00000489352 CCDC163A0A0D9SF12 145 aa12.99□□□□□ -0.33
HDAC6-233ENST00000489352 CCNE2O96020 404 aa12.99□□□□□ -0.33
HDAC6-233ENST00000489352 PSAPP07602 524 aa12.99□□□□□ -0.33
HDAC6-233ENST00000489352 PLA2G2AP14555 144 aa12.99□□□□□ -0.33
HDAC6-233ENST00000489352 PSMC3P17980 439 aa12.99□□□□□ -0.33
HDAC6-233ENST00000489352 MX1P20591 662 aa12.99□□□□□ -0.33
HDAC6-233ENST00000489352 DNM2P50570 870 aa12.99□□□□□ -0.33
HDAC6-233ENST00000489352 AFF1P51825 1210 aaKnown RBP12.99□□□□□ -0.33
HDAC6-233ENST00000489352 IMMTQ16891 758 aaKnown RBP12.99□□□□□ -0.33
HDAC6-233ENST00000489352 UVSSAQ2YD98 709 aa12.99□□□□□ -0.33
HDAC6-233ENST00000489352 CEP55Q53EZ4 464 aa12.99□□□□□ -0.33
HDAC6-233ENST00000489352 AXDND1Q5T1B0 1012 aaPredicted RBP12.99□□□□□ -0.33
HDAC6-233ENST00000489352 FUT10Q6P4F1 479 aa12.99□□□□□ -0.33
HDAC6-233ENST00000489352 Q6ZS52 159 aa12.99□□□□□ -0.33
HDAC6-233ENST00000489352 COLGALT2Q8IYK4 626 aa12.99□□□□□ -0.33
HDAC6-233ENST00000489352 RNF168Q8IYW5 571 aaPredicted RBP12.99□□□□□ -0.33
HDAC6-233ENST00000489352 DNMT3BQ9UBC3 853 aaKnown RBP12.99□□□□□ -0.33
HDAC6-233ENST00000489352 SLC8A2Q9UPR5 921 aa12.99□□□□□ -0.33
HDAC6-233ENST00000489352 SAMM50Q9Y512 469 aa12.99□□□□□ -0.33
HDAC6-233ENST00000489352 MAFBQ9Y5Q3 323 aaPredicted RBP12.99□□□□□ -0.33
HDAC6-233ENST00000489352 TADA2AO75478 443 aa12.98□□□□□ -0.33
HDAC6-233ENST00000489352 PLK5Q496M5 336 aa12.98□□□□□ -0.33
HDAC6-233ENST00000489352 PRSS55Q6UWB4 352 aaPredicted RBP12.98□□□□□ -0.33
HDAC6-233ENST00000489352 CEP57Q86XR8 500 aa12.98□□□□□ -0.33
HDAC6-233ENST00000489352 MAP4K3Q8IVH8 894 aa12.98□□□□□ -0.33
HDAC6-233ENST00000489352 YAF2Q8IY57 180 aa12.98□□□□□ -0.33
HDAC6-233ENST00000489352 CHCHD4Q8N4Q1 142 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms